RNA–Protein interactions for RNA: ENST00000457888.2

UBDP1-202, Transcript of ubiquitin D pseudogene 1, humanhuman

BASIC

Gene UBDP1, Length 382 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBDP1-202ENST00000457888 PTPN6P29350 595 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 RBMS1P29558 406 aaKnown RBP3.53□□□□□ -1.84
UBDP1-202ENST00000457888 DLSTP36957 453 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 MAP3K8P41279 467 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 FRKP42685 505 aaPredicted RBP3.53□□□□□ -1.84
UBDP1-202ENST00000457888 XCR1P46094 333 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 KRT6CP48668 564 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 ARFIP1P53367 373 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 NAA20P61599 178 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 EMX2Q04743 252 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 EGR4Q05215 589 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 ZNF33BQ06732 778 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 RGS1Q08116 209 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 PDE7AQ13946 482 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 SCARB2Q14108 478 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 HERC3Q15034 1050 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 NCF4Q15080 339 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 CEBPEQ15744 281 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 PAGE2BQ5JRK9 111 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 CFAP157Q5JU67 520 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 IL23RQ5VWK5 629 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 HIST2H2AA3Q6FI13 130 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 SIGIRRQ6IA17 410 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 PRMT9Q6P2P2 845 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 TRAT1Q6PIZ9 186 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 C16orf47Q6ZP98 133 aaPredicted RBP3.53□□□□□ -1.84
UBDP1-202ENST00000457888 RBPMS2Q6ZRY4 209 aaKnown RBP3.53□□□□□ -1.84
UBDP1-202ENST00000457888 SHFQ7M4L6 423 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 CAMKMTQ7Z624 323 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 ANKRD37Q7Z713 158 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 GPR180Q86V85 440 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 PRSS58Q8IYP2 241 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 GBP7Q8N8V2 638 aaPredicted RBP3.53□□□□□ -1.84
UBDP1-202ENST00000457888 TTLQ8NG68 377 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 OR11G2Q8NGC1 345 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 OR2Y1Q8NGV0 311 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 RAB3IL1Q8TBN0 382 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 PPP4R1Q8TF05 950 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 OIT3Q8WWZ8 545 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 UBE2E3Q969T4 207 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 RERGQ96A58 199 aaPredicted RBP3.53□□□□□ -1.84
UBDP1-202ENST00000457888 PPWD1Q96BP3 646 aaKnown RBP3.53□□□□□ -1.84
UBDP1-202ENST00000457888 NTNG2Q96CW9 530 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 HARBI1Q96MB7 349 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 SERPINI1Q99574 410 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 GFI1Q99684 422 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 NAA11Q9BSU3 229 aaPredicted RBP3.53□□□□□ -1.84
UBDP1-202ENST00000457888 TBCDQ9BTW9 1192 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 EBPLQ9BY08 206 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 PRORYQ9H606 182 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 ANKRA2Q9H9E1 313 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 LYRM4Q9HD34 91 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 FGFR1OP2Q9NVK5 253 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 C1orf109Q9NX04 203 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 CHCHD3Q9NX63 227 aaKnown RBP3.53□□□□□ -1.84
UBDP1-202ENST00000457888 NKIRAS1Q9NYS0 192 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 TRPC4Q9UBN4 977 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 ZNF639Q9UID6 485 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 TINAGQ9UJW2 476 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 FBXW2Q9UKT8 454 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 SNX6Q9UNH7 406 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 PPIEQ9UNP9 301 aaKnown RBP3.53□□□□□ -1.84
UBDP1-202ENST00000457888 B3GALT5Q9Y2C3 310 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 POLR3HQ9Y535 204 aaPredicted RBP3.53□□□□□ -1.84
UBDP1-202ENST00000457888 ANGPTL3Q9Y5C1 460 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 USH1CQ9Y6N9 552 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 NUP210LQ5VU65 1888 aa3.53□□□□□ -1.84
UBDP1-202ENST00000457888 POLEQ07864 2286 aa3.53□□□□□ -1.85
UBDP1-202ENST00000457888 SVILO95425 2214 aa3.52□□□□□ -1.85
UBDP1-202ENST00000457888 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.52□□□□□ -1.85
UBDP1-202ENST00000457888 GOLGA6L10A6NI86 522 aa3.52□□□□□ -1.85
UBDP1-202ENST00000457888 A8MUA0 341 aa3.52□□□□□ -1.85
UBDP1-202ENST00000457888 B4DXG7 233 aa3.52□□□□□ -1.85
UBDP1-202ENST00000457888 M0QZ24 198 aa3.52□□□□□ -1.85
UBDP1-202ENST00000457888 SLC28A1O00337 649 aa3.52□□□□□ -1.85
UBDP1-202ENST00000457888 TXNDC9O14530 226 aa3.52□□□□□ -1.85
UBDP1-202ENST00000457888 WNT9BO14905 357 aa3.52□□□□□ -1.85
UBDP1-202ENST00000457888 POLR3GO15318 223 aaPredicted RBP3.52□□□□□ -1.85
UBDP1-202ENST00000457888 ZIC3O60481 467 aa3.52□□□□□ -1.85
UBDP1-202ENST00000457888 TBX19O60806 448 aa3.52□□□□□ -1.85
UBDP1-202ENST00000457888 SHOX2O60902 331 aaPredicted RBP3.52□□□□□ -1.85
UBDP1-202ENST00000457888 SEC22BO75396 215 aa3.52□□□□□ -1.85
UBDP1-202ENST00000457888 LRATO95237 230 aa3.52□□□□□ -1.85
UBDP1-202ENST00000457888 TGDSO95455 350 aa3.52□□□□□ -1.85
UBDP1-202ENST00000457888 GPR75O95800 540 aa3.52□□□□□ -1.85
UBDP1-202ENST00000457888 IGKV3-11P04433 115 aa3.52□□□□□ -1.85
UBDP1-202ENST00000457888 TPOP07202 933 aa3.52□□□□□ -1.85
UBDP1-202ENST00000457888 KLK3P07288 261 aaPredicted RBP3.52□□□□□ -1.85
UBDP1-202ENST00000457888 IL3P08700 152 aa3.52□□□□□ -1.85
UBDP1-202ENST00000457888 HBQ1P09105 142 aa3.52□□□□□ -1.85
UBDP1-202ENST00000457888 ANXA4P09525 319 aaPredicted RBP3.52□□□□□ -1.85
UBDP1-202ENST00000457888 SLC35G6P0C7Q6 338 aa3.52□□□□□ -1.85
UBDP1-202ENST00000457888 C8orf89P0DMQ9 161 aa3.52□□□□□ -1.85
UBDP1-202ENST00000457888 COX6A1P12074 109 aa3.52□□□□□ -1.85
UBDP1-202ENST00000457888 EFNA1P20827 205 aaPredicted RBP3.52□□□□□ -1.85
UBDP1-202ENST00000457888 MMP11P24347 488 aa3.52□□□□□ -1.85
UBDP1-202ENST00000457888 CD82P27701 267 aa3.52□□□□□ -1.85
UBDP1-202ENST00000457888 HMOX2P30519 316 aa3.52□□□□□ -1.85
UBDP1-202ENST00000457888 SERPINB1P30740 379 aa3.52□□□□□ -1.85
UBDP1-202ENST00000457888 TIA1P31483 386 aaKnown RBP eCLIP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms