RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 PIGXQ8TBF5 258 aa12.8□□□□□ -0.36
HMGXB4-204ENST00000455359 TMEM255BQ8WV15 326 aa12.8□□□□□ -0.36
HMGXB4-204ENST00000455359 LIPHQ8WWY8 451 aa12.8□□□□□ -0.36
HMGXB4-204ENST00000455359 TAAR8Q969N4 342 aa12.8□□□□□ -0.36
HMGXB4-204ENST00000455359 FKRPQ9H9S5 495 aa12.8□□□□□ -0.36
HMGXB4-204ENST00000455359 KRCC1Q9NPI7 259 aaPredicted RBP12.8□□□□□ -0.36
HMGXB4-204ENST00000455359 ARMC1Q9NVT9 282 aa12.8□□□□□ -0.36
HMGXB4-204ENST00000455359 KLHL9Q9P2J3 617 aa12.8□□□□□ -0.36
HMGXB4-204ENST00000455359 RHCGQ9UBD6 479 aa12.8□□□□□ -0.36
HMGXB4-204ENST00000455359 SH3BGRL2Q9UJC5 107 aa12.8□□□□□ -0.36
HMGXB4-204ENST00000455359 ERRFI1Q9UJM3 462 aaPredicted RBP12.8□□□□□ -0.36
HMGXB4-204ENST00000455359 TMEM5Q9Y2B1 443 aa12.8□□□□□ -0.36
HMGXB4-204ENST00000455359 B3GALT5Q9Y2C3 310 aa12.8□□□□□ -0.36
HMGXB4-204ENST00000455359 ZGRF1Q86YA3 2104 aa12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 LRRK2Q5S007 2527 aa12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 LOC102725191A0A1B0GVB3 256 aa12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 AQP7P3A6NL99 342 aa12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 SMAD9O15198 467 aaKnown RBP12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 CYTIPO60759 359 aa12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 FKBP6O75344 327 aa12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 GADD45GO95257 159 aa12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 TGM6O95932 706 aa12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 FCGR1AP12314 374 aa12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 IFNGR2P38484 337 aa12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 RPS5P46782 204 aaKnown RBP12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 NUP107P57740 925 aa12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 SPIBQ01892 262 aa12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 CCNIQ14094 377 aa12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 ZNF74Q16587 644 aa12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 ANKDD1AQ495B1 522 aa12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 ABLIM2Q6H8Q1 611 aa12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 OR2T5Q6IEZ7 315 aa12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 C3P1Q6ZMU1 363 aa12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 ZNF730Q6ZMV8 503 aa12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 MBOAT2Q6ZWT7 520 aa12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 H1FNTQ75WM6 255 aaPredicted RBP12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 MAMDC2Q7Z304 686 aaPredicted RBP12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 MCEMP1Q8IX19 187 aa12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 CDK20Q8IZL9 346 aa12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 MARVELD2Q8N4S9 558 aa12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 C9orf106Q8NAJ2 232 aa12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 OR2T29Q8NH02 315 aa12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 SLC7A13Q8TCU3 470 aa12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 ASB5Q8WWX0 329 aa12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 SGTBQ96EQ0 304 aa12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 GMPPAQ96IJ6 420 aaPredicted RBP12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 FUZQ9BT04 418 aa12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 SF3B5Q9BWJ5 86 aaKnown RBP12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 ASPNQ9BXN1 380 aa12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 REEP1Q9H902 201 aa12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 MEPEQ9NQ76 525 aaPredicted RBP12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 ZNF229Q9UJW7 825 aa12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 TMCC3Q9ULS5 477 aa12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 RASD1Q9Y272 281 aa12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 NCKAP5O14513 1909 aa12.79□□□□□ -0.36
HMGXB4-204ENST00000455359 HIVEP3Q5T1R4 2406 aa12.78□□□□□ -0.36
HMGXB4-204ENST00000455359 IGKV3D-15A0A087WSY6 115 aa12.78□□□□□ -0.36
HMGXB4-204ENST00000455359 A0A087WUU8 490 aa12.78□□□□□ -0.36
HMGXB4-204ENST00000455359 ZNF724A8MTY0 619 aa12.78□□□□□ -0.36
HMGXB4-204ENST00000455359 GPR171O14626 319 aa12.78□□□□□ -0.36
HMGXB4-204ENST00000455359 AQP8O94778 261 aa12.78□□□□□ -0.36
HMGXB4-204ENST00000455359 DIRAS1O95057 198 aa12.78□□□□□ -0.36
HMGXB4-204ENST00000455359 BGLAPP02818 100 aa12.78□□□□□ -0.36
HMGXB4-204ENST00000455359 CTSSP25774 331 aa12.78□□□□□ -0.36
HMGXB4-204ENST00000455359 RRM2P31350 389 aa12.78□□□□□ -0.36
HMGXB4-204ENST00000455359 LIMS1P48059 325 aa12.78□□□□□ -0.36
HMGXB4-204ENST00000455359 SLC16A1P53985 500 aa12.78□□□□□ -0.36
HMGXB4-204ENST00000455359 UGT2B15P54855 530 aa12.78□□□□□ -0.36
HMGXB4-204ENST00000455359 PRKCDQ05655 676 aa12.78□□□□□ -0.36
HMGXB4-204ENST00000455359 FGD3Q5JSP0 725 aa12.78□□□□□ -0.36
HMGXB4-204ENST00000455359 ZFP1Q6P2D0 407 aa12.78□□□□□ -0.36
HMGXB4-204ENST00000455359 PODNL1Q6PEZ8 512 aa12.78□□□□□ -0.36
HMGXB4-204ENST00000455359 FJX1Q86VR8 437 aa12.78□□□□□ -0.36
HMGXB4-204ENST00000455359 ALPK1Q96QP1 1244 aa12.78□□□□□ -0.36
HMGXB4-204ENST00000455359 SFXN3Q9BWM7 321 aa12.78□□□□□ -0.36
HMGXB4-204ENST00000455359 BCO1Q9HAY6 547 aa12.78□□□□□ -0.36
HMGXB4-204ENST00000455359 NANSQ9NR45 359 aa12.78□□□□□ -0.36
HMGXB4-204ENST00000455359 MRPL39Q9NYK5 338 aaKnown RBP12.78□□□□□ -0.36
HMGXB4-204ENST00000455359 COQ3Q9NZJ6 369 aa12.78□□□□□ -0.36
HMGXB4-204ENST00000455359 EMC3Q9P0I2 261 aa12.78□□□□□ -0.36
HMGXB4-204ENST00000455359 DNAJB9Q9UBS3 223 aa12.78□□□□□ -0.36
HMGXB4-204ENST00000455359 ZNF629Q9UEG4 869 aaPredicted RBP12.78□□□□□ -0.36
HMGXB4-204ENST00000455359 TESMINQ9Y4I5 508 aa12.78□□□□□ -0.36
HMGXB4-204ENST00000455359 AP4S1Q9Y587 144 aa12.78□□□□□ -0.36
HMGXB4-204ENST00000455359 PCNX3Q9H6A9 2034 aa12.78□□□□□ -0.36
HMGXB4-204ENST00000455359 DOPEY1Q5JWR5 2465 aa12.77□□□□□ -0.36
HMGXB4-204ENST00000455359 GTF3C1Q12789 2109 aa12.77□□□□□ -0.36
HMGXB4-204ENST00000455359 SH3PXD2BA1X283 911 aa12.77□□□□□ -0.37
HMGXB4-204ENST00000455359 ENO4A6NNW6 628 aa12.77□□□□□ -0.37
HMGXB4-204ENST00000455359 TNFRSF11BO00300 401 aa12.77□□□□□ -0.37
HMGXB4-204ENST00000455359 HNRNPRO43390 633 aaKnown RBP12.77□□□□□ -0.37
HMGXB4-204ENST00000455359 SS18L1O75177 396 aaPredicted RBP12.77□□□□□ -0.37
HMGXB4-204ENST00000455359 TOXO94900 526 aa12.77□□□□□ -0.37
HMGXB4-204ENST00000455359 CH25HO95992 272 aa12.77□□□□□ -0.37
HMGXB4-204ENST00000455359 PLGP00747 810 aaPredicted RBP12.77□□□□□ -0.37
HMGXB4-204ENST00000455359 CST1P01037 141 aa12.77□□□□□ -0.37
HMGXB4-204ENST00000455359 HIST1H2ABP04908 130 aa12.77□□□□□ -0.37
HMGXB4-204ENST00000455359 TMIGD3P0DMS9 266 aaPredicted RBP12.77□□□□□ -0.37
HMGXB4-204ENST00000455359 OPRM1P35372 400 aa12.77□□□□□ -0.37
HMGXB4-204ENST00000455359 POU4F3Q15319 338 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms