RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 EMC3Q9P0I2 261 aa12.58□□□□□ -0.4
HDAC4-205ENST00000454542 SLC9A8Q9Y2E8 581 aa12.58□□□□□ -0.4
HDAC4-205ENST00000454542 MAST4O15021 2626 aa12.57□□□□□ -0.4
HDAC4-205ENST00000454542 CXCR6O00574 342 aa12.57□□□□□ -0.4
HDAC4-205ENST00000454542 IFNA14P01570 189 aa12.57□□□□□ -0.4
HDAC4-205ENST00000454542 POU2F1P14859 743 aa12.57□□□□□ -0.4
HDAC4-205ENST00000454542 PSMB1P20618 241 aaKnown RBP12.57□□□□□ -0.4
HDAC4-205ENST00000454542 TLE4Q04727 773 aa12.57□□□□□ -0.4
HDAC4-205ENST00000454542 FAM27E3Q08E93 113 aa12.57□□□□□ -0.4
HDAC4-205ENST00000454542 SNTB1Q13884 538 aaKnown RBP12.57□□□□□ -0.4
HDAC4-205ENST00000454542 SLC17A1Q14916 467 aa12.57□□□□□ -0.4
HDAC4-205ENST00000454542 POU4F3Q15319 338 aa12.57□□□□□ -0.4
HDAC4-205ENST00000454542 ENTPD8Q5MY95 495 aa12.57□□□□□ -0.4
HDAC4-205ENST00000454542 FAM69AQ5T7M9 428 aa12.57□□□□□ -0.4
HDAC4-205ENST00000454542 WDR88Q6ZMY6 472 aa12.57□□□□□ -0.4
HDAC4-205ENST00000454542 BEND4Q6ZU67 534 aa12.57□□□□□ -0.4
HDAC4-205ENST00000454542 CARM1Q86X55 608 aa12.57□□□□□ -0.4
HDAC4-205ENST00000454542 CCDC103Q8IW40 242 aa12.57□□□□□ -0.4
HDAC4-205ENST00000454542 CCDC197Q8NCU1 140 aa12.57□□□□□ -0.4
HDAC4-205ENST00000454542 ADPRHL1Q8NDY3 354 aa12.57□□□□□ -0.4
HDAC4-205ENST00000454542 VANGL1Q8TAA9 524 aaPredicted RBP12.57□□□□□ -0.4
HDAC4-205ENST00000454542 ADAMTS16Q8TE57 1224 aa12.57□□□□□ -0.4
HDAC4-205ENST00000454542 TMEM45BQ96B21 275 aa12.57□□□□□ -0.4
HDAC4-205ENST00000454542 KTI12Q96EK9 354 aaPredicted RBP12.57□□□□□ -0.4
HDAC4-205ENST00000454542 DACH2Q96NX9 599 aa12.57□□□□□ -0.4
HDAC4-205ENST00000454542 NAA11Q9BSU3 229 aaPredicted RBP12.57□□□□□ -0.4
HDAC4-205ENST00000454542 SF3B5Q9BWJ5 86 aaKnown RBP12.57□□□□□ -0.4
HDAC4-205ENST00000454542 OR10A4Q9H209 315 aa12.57□□□□□ -0.4
HDAC4-205ENST00000454542 C12orf49Q9H741 205 aa12.57□□□□□ -0.4
HDAC4-205ENST00000454542 MCCC2Q9HCC0 563 aa12.57□□□□□ -0.4
HDAC4-205ENST00000454542 FLVCR1Q9Y5Y0 555 aa12.57□□□□□ -0.4
HDAC4-205ENST00000454542 FREM1Q5H8C1 2179 aa12.57□□□□□ -0.4
HDAC4-205ENST00000454542 ABCA12Q86UK0 2595 aa12.57□□□□□ -0.4
HDAC4-205ENST00000454542 TRAV36DV7A0A075B6V5 113 aa12.56□□□□□ -0.4
HDAC4-205ENST00000454542 TRAPPC13A5PLN9 417 aa12.56□□□□□ -0.4
HDAC4-205ENST00000454542 TUBAL3A6NHL2 446 aa12.56□□□□□ -0.4
HDAC4-205ENST00000454542 CPSF4LA6NMK7 179 aaKnown RBP12.56□□□□□ -0.4
HDAC4-205ENST00000454542 GPR171O14626 319 aa12.56□□□□□ -0.4
HDAC4-205ENST00000454542 CNOT4O95628 575 aaKnown RBP12.56□□□□□ -0.4
HDAC4-205ENST00000454542 EPXP11678 715 aa12.56□□□□□ -0.4
HDAC4-205ENST00000454542 GGT1P19440 569 aa12.56□□□□□ -0.4
HDAC4-205ENST00000454542 TNFRSF1BP20333 461 aa12.56□□□□□ -0.4
HDAC4-205ENST00000454542 COX5AP20674 150 aa12.56□□□□□ -0.4
HDAC4-205ENST00000454542 NTF4P34130 210 aa12.56□□□□□ -0.4
HDAC4-205ENST00000454542 DAZAP2Q15038 168 aaPredicted RBP12.56□□□□□ -0.4
HDAC4-205ENST00000454542 OTUD3Q5T2D3 398 aaPredicted RBP12.56□□□□□ -0.4
HDAC4-205ENST00000454542 STAC2Q6ZMT1 411 aa12.56□□□□□ -0.4
HDAC4-205ENST00000454542 CBLL1Q75N03 491 aa12.56□□□□□ -0.4
HDAC4-205ENST00000454542 GALNT5Q7Z7M9 940 aa12.56□□□□□ -0.4
HDAC4-205ENST00000454542 STK32CQ86UX6 486 aa12.56□□□□□ -0.4
HDAC4-205ENST00000454542 TMEM99Q8N816 258 aa12.56□□□□□ -0.4
HDAC4-205ENST00000454542 PROX1Q92786 737 aa12.56□□□□□ -0.4
HDAC4-205ENST00000454542 PRSS27Q9BQR3 290 aa12.56□□□□□ -0.4
HDAC4-205ENST00000454542 TAPBPLQ9BX59 468 aa12.56□□□□□ -0.4
HDAC4-205ENST00000454542 CACNA1DQ01668 2161 aa12.55□□□□□ -0.4
HDAC4-205ENST00000454542 HRNRQ86YZ3 2850 aaPredicted RBP12.55□□□□□ -0.4
HDAC4-205ENST00000454542 SH3D21A4FU49 640 aa12.55□□□□□ -0.4
HDAC4-205ENST00000454542 A6NNC1 897 aa12.55□□□□□ -0.4
HDAC4-205ENST00000454542 OR2T1O43869 369 aa12.55□□□□□ -0.4
HDAC4-205ENST00000454542 AKR7A3O95154 331 aa12.55□□□□□ -0.4
HDAC4-205ENST00000454542 VAMP5O95183 116 aa12.55□□□□□ -0.4
HDAC4-205ENST00000454542 OR5F1O95221 314 aa12.55□□□□□ -0.4
HDAC4-205ENST00000454542 BGLAPP02818 100 aa12.55□□□□□ -0.4
HDAC4-205ENST00000454542 HSD17B1P14061 328 aa12.55□□□□□ -0.4
HDAC4-205ENST00000454542 RPS5P46782 204 aaKnown RBP12.55□□□□□ -0.4
HDAC4-205ENST00000454542 SELENOWP63302 87 aa12.55□□□□□ -0.4
HDAC4-205ENST00000454542 Q6ZT83 130 aa12.55□□□□□ -0.4
HDAC4-205ENST00000454542 OR9K2Q8NGE7 335 aa12.55□□□□□ -0.4
HDAC4-205ENST00000454542 LINC01560Q8TB33 94 aa12.55□□□□□ -0.4
HDAC4-205ENST00000454542 TAAR8Q969N4 342 aa12.55□□□□□ -0.4
HDAC4-205ENST00000454542 SLC41A3Q96GZ6 507 aa12.55□□□□□ -0.4
HDAC4-205ENST00000454542 MPP4Q96JB8 637 aa12.55□□□□□ -0.4
HDAC4-205ENST00000454542 EPYCQ99645 322 aa12.55□□□□□ -0.4
HDAC4-205ENST00000454542 KCTD14Q9BQ13 255 aaPredicted RBP12.55□□□□□ -0.4
HDAC4-205ENST00000454542 SELENONQ9NZV5 590 aa12.55□□□□□ -0.4
HDAC4-205ENST00000454542 B3GAT1Q9P2W7 334 aa12.55□□□□□ -0.4
HDAC4-205ENST00000454542 MALT1Q9UDY8 824 aa12.55□□□□□ -0.4
HDAC4-205ENST00000454542 CD300AQ9UGN4 299 aa12.55□□□□□ -0.4
HDAC4-205ENST00000454542 PRSS50Q9UI38 385 aa12.55□□□□□ -0.4
HDAC4-205ENST00000454542 SH3GLB1Q9Y371 365 aa12.55□□□□□ -0.4
HDAC4-205ENST00000454542 AKAP9Q99996 3911 aa12.54□□□□□ -0.4
HDAC4-205ENST00000454542 C16orf97H3BN30 126 aa12.54□□□□□ -0.4
HDAC4-205ENST00000454542 PDLIM1O00151 329 aa12.54□□□□□ -0.4
HDAC4-205ENST00000454542 CTAG2O75638 210 aa12.54□□□□□ -0.4
HDAC4-205ENST00000454542 THRBP10828 461 aa12.54□□□□□ -0.4
HDAC4-205ENST00000454542 KRTAP10-9P60411 292 aa12.54□□□□□ -0.4
HDAC4-205ENST00000454542 LTBQ06643 244 aa12.54□□□□□ -0.4
HDAC4-205ENST00000454542 MFSD13AQ14CX5 517 aa12.54□□□□□ -0.4
HDAC4-205ENST00000454542 ZIC4Q8N9L1 334 aa12.54□□□□□ -0.4
HDAC4-205ENST00000454542 SCAIQ8N9R8 606 aa12.54□□□□□ -0.4
HDAC4-205ENST00000454542 GEMIN6Q8WXD5 167 aaKnown RBP12.54□□□□□ -0.4
HDAC4-205ENST00000454542 LURAP1Q96LR2 239 aa12.54□□□□□ -0.4
HDAC4-205ENST00000454542 SLC19A3Q9BZV2 496 aa12.54□□□□□ -0.4
HDAC4-205ENST00000454542 FANCFQ9NPI8 374 aa12.54□□□□□ -0.4
HDAC4-205ENST00000454542 ADPRHL2Q9NX46 363 aa12.54□□□□□ -0.4
HDAC4-205ENST00000454542 NDE1Q9NXR1 346 aa12.54□□□□□ -0.4
HDAC4-205ENST00000454542 SEC14L4Q9UDX3 406 aa12.54□□□□□ -0.4
HDAC4-205ENST00000454542 RASD1Q9Y272 281 aa12.54□□□□□ -0.4
HDAC4-205ENST00000454542 GPR52Q9Y2T5 361 aa12.54□□□□□ -0.4
HDAC4-205ENST00000454542 NOSIPQ9Y314 301 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms