RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 METTL21AQ8WXB1 218 aa10.99□□□□□ -0.65
SMPD4-213ENST00000454468 TCTN2Q96GX1 697 aa10.99□□□□□ -0.65
SMPD4-213ENST00000454468 TCF7L1Q9HCS4 588 aa10.99□□□□□ -0.65
SMPD4-213ENST00000454468 CENPMQ9NSP4 180 aa10.99□□□□□ -0.65
SMPD4-213ENST00000454468 LAMP5Q9UJQ1 280 aa10.99□□□□□ -0.65
SMPD4-213ENST00000454468 UGT2A1Q9Y4X1 527 aa10.99□□□□□ -0.65
SMPD4-213ENST00000454468 VPS13AQ96RL7 3174 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 TRDV1A0A1B0GX56 115 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 A6NCN8 305 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 TGFBR3LH3BV60 316 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 KHDRBS3O75525 346 aaKnown RBP10.98□□□□□ -0.65
SMPD4-213ENST00000454468 SPARCP09486 303 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 UBL4AP11441 157 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 PTHLHP12272 177 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 PRKCAP17252 672 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 SNTA1Q13424 505 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 CCINQ13939 588 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 CD300LDQ6UXZ3 194 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 LUZP2Q86TE4 346 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 TOMM5Q8N4H5 51 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 LSM14AQ8ND56 463 aaKnown RBP10.98□□□□□ -0.65
SMPD4-213ENST00000454468 NSMAFQ92636 917 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 RNF121Q9H920 327 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 PLSCR3Q9NRY6 295 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 PRODH2Q9UF12 536 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 V9GYH0 126 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 LTBP2Q14767 1821 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 OIP5O43482 229 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 FOXS1O43638 330 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 SRPX2O60687 465 aaPredicted RBP10.98□□□□□ -0.65
SMPD4-213ENST00000454468 UBE2IP63279 158 aaKnown RBP10.98□□□□□ -0.65
SMPD4-213ENST00000454468 TDGQ13569 410 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 CD226Q15762 336 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 HSD17B12Q53GQ0 312 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 FAM69BQ5VUD6 431 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 C1QL3Q5VWW1 255 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 NPSR1Q6W5P4 371 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 DPY19L4Q7Z388 723 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 GRAMD2AQ8IUY3 354 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 DNAAF1Q8NEP3 725 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 OR7G1Q8NGA0 311 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 OR6C4Q8NGE1 309 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 C1orf216Q8TAB5 229 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 FLVCR1-AS1Q8TAF5 88 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 STACQ99469 402 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 SDHCQ99643 169 aaPredicted RBP10.98□□□□□ -0.65
SMPD4-213ENST00000454468 ORAI3Q9BRQ5 295 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 IRF2BPLQ9H1B7 796 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 SYT4Q9H2B2 425 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 B3GAT2Q9NPZ5 323 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 NUDT15Q9NV35 164 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 DNAJB12Q9NXW2 375 aaKnown RBP10.98□□□□□ -0.65
SMPD4-213ENST00000454468 PCOLCE2Q9UKZ9 415 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 POLR1DQ9Y2S0 133 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 MPDZO75970 2070 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 MEIS3P1A6NDR6 274 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 WNT1P04628 370 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 FBLP22087 321 aaKnown RBP10.98□□□□□ -0.65
SMPD4-213ENST00000454468 CAPZBP47756 277 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 GFOD2Q3B7J2 385 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 PHF19Q5T6S3 580 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 FGD2Q7Z6J4 655 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 ELMOD2Q8IZ81 293 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 TDHQ8IZJ6 230 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 LILRB4Q8NHJ6 448 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 DUSP19Q8WTR2 217 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 RFT1Q96AA3 541 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 TSPAN10Q9H1Z9 355 aaPredicted RBP10.98□□□□□ -0.65
SMPD4-213ENST00000454468 PPIL3Q9H2H8 161 aaKnown RBP10.98□□□□□ -0.65
SMPD4-213ENST00000454468 SERTAD3Q9UJW9 196 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 A3GALT2U3KPV4 340 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 HEATR5AQ86XA9 2040 aa10.98□□□□□ -0.65
SMPD4-213ENST00000454468 UTS2O95399 124 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 RORAP35398 523 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 KIR2DL3P43628 341 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 SFXN4Q6P4A7 337 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 SLC29A4Q7RTT9 530 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 RNF113BQ8IZP6 322 aaKnown RBP10.97□□□□□ -0.65
SMPD4-213ENST00000454468 LNX2Q8N448 690 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 GDPD1Q8N9F7 314 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 SPERTQ8NA61 448 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 ATOH1Q92858 354 aaPredicted RBP10.97□□□□□ -0.65
SMPD4-213ENST00000454468 MOGAT1Q96PD6 335 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 PSD2Q9BQI7 771 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 FUZQ9BT04 418 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 THAP7Q9BT49 309 aaPredicted RBP10.97□□□□□ -0.65
SMPD4-213ENST00000454468 OR11A1Q9GZK7 315 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 ANKRD19PQ9H560 264 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 GALNT9Q9HCQ5 603 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 RXFP3Q9NSD7 469 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 A0A087WV62 115 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 A0A0B4J2E0 115 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 IQCMA0A1B0GVH7 501 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 A0A1B0GX12 115 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 TNFSF14O43557 240 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 NKX2-2O95096 273 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 BCL2A1Q16548 175 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 ZNF613Q6PF04 617 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 LANCL3Q6ZV70 420 aa10.97□□□□□ -0.65
SMPD4-213ENST00000454468 ZNF595Q8IYB9 648 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms