RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 TBC1D3EA0A087X179 549 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 TMEM72A0PK05 275 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 OR5K3A6NET4 321 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 NAP1L6A6NFF2 107 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 ZNF705EA8MWA4 302 aaPredicted RBP12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 EEF1E1-BLOC1S5C9J1V9 151 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 MCRIP1C9JLW8 97 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 CCSO14618 274 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 DOK2O60496 412 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 FGF18O76093 207 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 RPE65Q16518 533 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 MFSD12Q6NUT3 480 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 OR52E1Q8NGJ3 308 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 MS4A6EQ96DS6 147 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 WDR34Q96EX3 536 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 TSSK2Q96PF2 358 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 HCFC2Q9Y5Z7 792 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 FNDC1Q4ZHG4 1894 aaPredicted RBP12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 H7C1C5 153 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 PLPP2O43688 288 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 AMY2AP04746 511 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 HOXD4P09016 255 aaPredicted RBP12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 LUMP51884 338 aaPredicted RBP12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 LCN6P62502 163 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 DYRK1AQ13627 763 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 DCST2Q5T1A1 773 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 ZNF227Q86WZ6 799 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 FOXRED2Q8IWF2 684 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 OR51Q1Q8NH59 317 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 SRMSQ9H3Y6 488 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 SYNDIG1Q9H7V2 258 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 FKRPQ9H9S5 495 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 TBC1D3DA0A087WVF3 549 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 TBC1D3IA0A087WXS9 549 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 TBC1D3KA0A087X1G2 549 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 TBC1D3FA6NER0 549 aaPredicted RBP12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 TBC1D3LB9A6J9 549 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 GABARAPH6UMI1 98 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 PRAMEF2O60811 474 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 AGR2O95994 175 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 ADH1CP00326 375 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 IGF2P01344 180 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 S100A6P06703 90 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 DBIP07108 87 aaKnown RBP12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 GIPP09681 153 aaPredicted RBP12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 TBC1D3HP0C7X1 549 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 LTBQ06643 244 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 TBC1D3GQ6DHY5 549 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 TBC1D3CQ6IPX1 549 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 TMEM17Q86X19 198 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 TBC1D3Q8IZP1 549 aaPredicted RBP12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 SPAG16Q8N0X2 631 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 JAGN1Q8N5M9 183 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 RERGQ96A58 199 aaPredicted RBP12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 PELI1Q96FA3 418 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 C14orf105Q9NVL8 296 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 KIF25Q9UIL4 384 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 F3P13726 295 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 HIST1H1CP16403 213 aaKnown RBP12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 GRK6P43250 576 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 DEFB103AP81534 67 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 GUCA2AQ02747 115 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 CDK5R1Q15078 307 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 TMEM255AQ5JRV8 349 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 VITQ6UXI7 678 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 OR51D1Q8NGF3 324 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 SFXN5Q8TD22 340 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 SPHK1Q9NYA1 384 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 GLS2Q9UI32 602 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 GPR160Q9UJ42 338 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 EDARQ9UNE0 448 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 GPR34Q9UPC5 381 aa12.79□□□□□ -0.36
UBE2D3-210ENST00000453744 D6RAR5 112 aa12.78□□□□□ -0.36
UBE2D3-210ENST00000453744 FARS2O95363 451 aaKnown RBP12.78□□□□□ -0.36
UBE2D3-210ENST00000453744 AQP2P41181 271 aa12.78□□□□□ -0.36
UBE2D3-210ENST00000453744 CDK3Q00526 305 aa12.78□□□□□ -0.36
UBE2D3-210ENST00000453744 GPAT4Q86UL3 456 aa12.78□□□□□ -0.36
UBE2D3-210ENST00000453744 ZFP82Q8N141 532 aa12.78□□□□□ -0.36
UBE2D3-210ENST00000453744 INO80EQ8NBZ0 244 aaPredicted RBP12.78□□□□□ -0.36
UBE2D3-210ENST00000453744 PXT1Q8NFP0 134 aa12.78□□□□□ -0.36
UBE2D3-210ENST00000453744 OR11G2Q8NGC1 345 aa12.78□□□□□ -0.36
UBE2D3-210ENST00000453744 C2CD4CQ8TF44 421 aa12.78□□□□□ -0.36
UBE2D3-210ENST00000453744 RASD2Q96D21 266 aa12.78□□□□□ -0.36
UBE2D3-210ENST00000453744 LHX9Q9NQ69 397 aa12.78□□□□□ -0.36
UBE2D3-210ENST00000453744 LAMP5Q9UJQ1 280 aa12.78□□□□□ -0.36
UBE2D3-210ENST00000453744 C17orf113A0A1B0GUU1 675 aa12.78□□□□□ -0.36
UBE2D3-210ENST00000453744 TACSTD2P09758 323 aa12.78□□□□□ -0.36
UBE2D3-210ENST00000453744 CCKBRP32239 447 aa12.78□□□□□ -0.36
UBE2D3-210ENST00000453744 VASNQ6EMK4 673 aa12.78□□□□□ -0.36
UBE2D3-210ENST00000453744 LINC01555Q8NAE3 123 aa12.78□□□□□ -0.36
UBE2D3-210ENST00000453744 OR5AK2Q8NH90 309 aa12.78□□□□□ -0.36
UBE2D3-210ENST00000453744 UBL7Q96S82 380 aaPredicted RBP12.78□□□□□ -0.36
UBE2D3-210ENST00000453744 SDF2Q99470 211 aa12.78□□□□□ -0.36
UBE2D3-210ENST00000453744 SLC38A3Q99624 504 aa12.78□□□□□ -0.36
UBE2D3-210ENST00000453744 INPP5EQ9NRR6 644 aa12.78□□□□□ -0.36
UBE2D3-210ENST00000453744 ZNF346Q9UL40 294 aaKnown RBP12.78□□□□□ -0.36
UBE2D3-210ENST00000453744 SLC27A6Q9Y2P4 619 aa12.78□□□□□ -0.36
UBE2D3-210ENST00000453744 SCN10AQ9Y5Y9 1956 aa12.78□□□□□ -0.36
UBE2D3-210ENST00000453744 A0A1B0GUH1 482 aa12.78□□□□□ -0.36
UBE2D3-210ENST00000453744 SLC22A23A1A5C7 686 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms