RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 LIN52Q52LA3 116 aa23.76■■□□□ 1.39
USP42-204ENST00000451154 GPAT4Q86UL3 456 aa23.76■■□□□ 1.39
USP42-204ENST00000451154 C1orf162Q8NEQ5 155 aaPredicted RBP23.76■■□□□ 1.39
USP42-204ENST00000451154 OR10H5Q8NGA6 315 aa23.76■■□□□ 1.39
USP42-204ENST00000451154 SLC38A5Q8WUX1 472 aa23.76■■□□□ 1.39
USP42-204ENST00000451154 TMEM45BQ96B21 275 aa23.76■■□□□ 1.39
USP42-204ENST00000451154 TPT1P8Q9HAU6 139 aa23.76■■□□□ 1.39
USP42-204ENST00000451154 YLPM1P49750 1951 aaKnown RBP23.76■■□□□ 1.39
USP42-204ENST00000451154 FAM234BA2RU67 622 aa23.75■■□□□ 1.39
USP42-204ENST00000451154 SLCO1B7G3V0H7 640 aa23.75■■□□□ 1.39
USP42-204ENST00000451154 TLX2O43763 284 aaPredicted RBP23.75■■□□□ 1.39
USP42-204ENST00000451154 BCHEP06276 602 aa23.75■■□□□ 1.39
USP42-204ENST00000451154 PRG2P13727 222 aa23.75■■□□□ 1.39
USP42-204ENST00000451154 DSTNP60981 165 aa23.75■■□□□ 1.39
USP42-204ENST00000451154 RPS26P11Q5JNZ5 115 aaPredicted RBP23.75■■□□□ 1.39
USP42-204ENST00000451154 WBP2NLQ6ICG8 309 aa23.75■■□□□ 1.39
USP42-204ENST00000451154 C17orf78Q8N4C9 275 aa23.75■■□□□ 1.39
USP42-204ENST00000451154 AURKBQ96GD4 344 aaPredicted RBP23.75■■□□□ 1.39
USP42-204ENST00000451154 MAELQ96JY0 434 aaKnown RBP23.75■■□□□ 1.39
USP42-204ENST00000451154 ADPRHL2Q9NX46 363 aa23.75■■□□□ 1.39
USP42-204ENST00000451154 CALML5Q9NZT1 146 aa23.75■■□□□ 1.39
USP42-204ENST00000451154 ZNF443Q9Y2A4 671 aaPredicted RBP23.75■■□□□ 1.39
USP42-204ENST00000451154 AMDHD2Q9Y303 409 aa23.75■■□□□ 1.39
USP42-204ENST00000451154 DSPPQ9NZW4 1301 aa23.75■■□□□ 1.39
USP42-204ENST00000451154 AQP7P3A6NL99 342 aa23.74■■□□□ 1.39
USP42-204ENST00000451154 ZCCHC18P0CG32 403 aa23.74■■□□□ 1.39
USP42-204ENST00000451154 CRISP3P54108 245 aa23.74■■□□□ 1.39
USP42-204ENST00000451154 PRPS1P60891 318 aa23.74■■□□□ 1.39
USP42-204ENST00000451154 COPZ1P61923 177 aa23.74■■□□□ 1.39
USP42-204ENST00000451154 ATG16L1Q676U5 607 aa23.74■■□□□ 1.39
USP42-204ENST00000451154 TMEM225Q6GV28 225 aa23.74■■□□□ 1.39
USP42-204ENST00000451154 MAVSQ7Z434 540 aa23.74■■□□□ 1.39
USP42-204ENST00000451154 SF3B5Q9BWJ5 86 aaKnown RBP23.74■■□□□ 1.39
USP42-204ENST00000451154 MANSC1Q9H8J5 431 aa23.74■■□□□ 1.39
USP42-204ENST00000451154 FKRPQ9H9S5 495 aa23.74■■□□□ 1.39
USP42-204ENST00000451154 ZNF232Q9UNY5 417 aa23.74■■□□□ 1.39
USP42-204ENST00000451154 CHST2Q9Y4C5 530 aa23.74■■□□□ 1.39
USP42-204ENST00000451154 CUBNO60494 3623 aa23.73■■□□□ 1.39
USP42-204ENST00000451154 A8MVM7 634 aa23.73■■□□□ 1.39
USP42-204ENST00000451154 KLF11O14901 512 aa23.73■■□□□ 1.39
USP42-204ENST00000451154 LARS2Q15031 903 aaKnown RBP23.73■■□□□ 1.39
USP42-204ENST00000451154 HIKESHIQ53FT3 197 aa23.73■■□□□ 1.39
USP42-204ENST00000451154 ZNF544Q6NX49 715 aa23.73■■□□□ 1.39
USP42-204ENST00000451154 CLEC2AQ6UVW9 174 aa23.73■■□□□ 1.39
USP42-204ENST00000451154 CXXC5Q7LFL8 322 aaKnown RBP23.73■■□□□ 1.39
USP42-204ENST00000451154 VPS33AQ96AX1 596 aa23.73■■□□□ 1.39
USP42-204ENST00000451154 TMEM19Q96HH6 336 aa23.73■■□□□ 1.39
USP42-204ENST00000451154 ITCHQ96J02 903 aa23.73■■□□□ 1.39
USP42-204ENST00000451154 OR52B2Q96RD2 323 aa23.73■■□□□ 1.39
USP42-204ENST00000451154 TAPBPLQ9BX59 468 aa23.73■■□□□ 1.39
USP42-204ENST00000451154 ZIM2Q9NZV7 527 aa23.73■■□□□ 1.39
USP42-204ENST00000451154 ARFGEF3Q5TH69 2177 aa23.73■■□□□ 1.39
USP42-204ENST00000451154 NCF2P19878 526 aaPredicted RBP23.72■■□□□ 1.39
USP42-204ENST00000451154 P2RY4P51582 365 aa23.72■■□□□ 1.39
USP42-204ENST00000451154 POLR2JP52435 117 aaKnown RBP23.72■■□□□ 1.39
USP42-204ENST00000451154 LGALS3BPQ08380 585 aa23.72■■□□□ 1.39
USP42-204ENST00000451154 POMGNT2Q8NAT1 580 aa23.72■■□□□ 1.39
USP42-204ENST00000451154 OR9I1Q8NGQ6 314 aa23.72■■□□□ 1.39
USP42-204ENST00000451154 RMND5AQ9H871 391 aa23.72■■□□□ 1.39
USP42-204ENST00000451154 SDR39U1Q9NRG7 319 aaPredicted RBP23.72■■□□□ 1.39
USP42-204ENST00000451154 PRDM4Q9UKN5 801 aa23.72■■□□□ 1.39
USP42-204ENST00000451154 A0A096LNT2 108 aa23.71■■□□□ 1.39
USP42-204ENST00000451154 A0A0G2JPF8 293 aa23.71■■□□□ 1.39
USP42-204ENST00000451154 HNRNPCL2B2RXH8 293 aa23.71■■□□□ 1.39
USP42-204ENST00000451154 HNRNPCL3B7ZW38 293 aa23.71■■□□□ 1.39
USP42-204ENST00000451154 ATP6V1G2-DDX39BF2Z307 99 aa23.71■■□□□ 1.39
USP42-204ENST00000451154 UBDO15205 165 aa23.71■■□□□ 1.39
USP42-204ENST00000451154 HNRNPCL1O60812 293 aaKnown RBP23.71■■□□□ 1.39
USP42-204ENST00000451154 KRT33AO76009 404 aa23.71■■□□□ 1.39
USP42-204ENST00000451154 HNRNPCL4P0DMR1 293 aa23.71■■□□□ 1.39
USP42-204ENST00000451154 DSCR9P59020 149 aa23.71■■□□□ 1.39
USP42-204ENST00000451154 MAGOHP61326 146 aaKnown RBP23.71■■□□□ 1.39
USP42-204ENST00000451154 C6orf10Q5SRN2 563 aa23.71■■□□□ 1.39
USP42-204ENST00000451154 RNF220Q5VTB9 566 aa23.71■■□□□ 1.39
USP42-204ENST00000451154 C1orf140Q5VVS0 124 aa23.71■■□□□ 1.39
USP42-204ENST00000451154 HMBOX1Q6NT76 420 aa23.71■■□□□ 1.39
USP42-204ENST00000451154 SERPINA11Q86U17 422 aa23.71■■□□□ 1.39
USP42-204ENST00000451154 HIPK1Q86Z02 1210 aa23.71■■□□□ 1.39
USP42-204ENST00000451154 ZNF525Q8N782 197 aa23.71■■□□□ 1.39
USP42-204ENST00000451154 PIF1Q9H611 641 aa23.71■■□□□ 1.39
USP42-204ENST00000451154 MOKQ9UQ07 419 aa23.71■■□□□ 1.39
USP42-204ENST00000451154 WNT11O96014 354 aa23.7■■□□□ 1.38
USP42-204ENST00000451154 NUDT7P0C024 238 aa23.7■■□□□ 1.38
USP42-204ENST00000451154 APOBEC3AP31941 199 aaPredicted RBP23.7■■□□□ 1.38
USP42-204ENST00000451154 HOXC5Q00444 222 aa23.7■■□□□ 1.38
USP42-204ENST00000451154 KLHL24Q6TFL4 600 aa23.7■■□□□ 1.38
USP42-204ENST00000451154 CREB3L2Q70SY1 520 aa23.7■■□□□ 1.38
USP42-204ENST00000451154 C3orf49Q96BT1 292 aa23.7■■□□□ 1.38
USP42-204ENST00000451154 SPATA9Q9BWV2 254 aa23.7■■□□□ 1.38
USP42-204ENST00000451154 NKIRAS1Q9NYS0 192 aa23.7■■□□□ 1.38
USP42-204ENST00000451154 A8MV72 311 aaPredicted RBP23.69■■□□□ 1.38
USP42-204ENST00000451154 H7C417 338 aa23.69■■□□□ 1.38
USP42-204ENST00000451154 FRS3O43559 492 aa23.69■■□□□ 1.38
USP42-204ENST00000451154 ZNF500O60304 480 aaPredicted RBP23.69■■□□□ 1.38
USP42-204ENST00000451154 LGI1O95970 557 aa23.69■■□□□ 1.38
USP42-204ENST00000451154 SELENOPP49908 381 aa23.69■■□□□ 1.38
USP42-204ENST00000451154 SLC18A1P54219 525 aa23.69■■□□□ 1.38
USP42-204ENST00000451154 CHRNB3Q05901 458 aa23.69■■□□□ 1.38
USP42-204ENST00000451154 ZSWIM7Q19AV6 140 aa23.69■■□□□ 1.38
USP42-204ENST00000451154 MSANTD1Q6ZTZ1 278 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms