RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 TMEM185BQ9H7F4 350 aa15.26■□□□□ 0.03
PRPF40A-204ENST00000450303 TMEM27Q9HBJ8 222 aa15.26■□□□□ 0.03
PRPF40A-204ENST00000450303 IL1RAPQ9NPH3 570 aa15.26■□□□□ 0.03
PRPF40A-204ENST00000450303 C8orf4Q9NR00 106 aa15.26■□□□□ 0.03
PRPF40A-204ENST00000450303 CCM2LQ9NUG4 571 aaPredicted RBP15.26■□□□□ 0.03
PRPF40A-204ENST00000450303 ARMC1Q9NVT9 282 aa15.26■□□□□ 0.03
PRPF40A-204ENST00000450303 RPS6KB2Q9UBS0 482 aa15.26■□□□□ 0.03
PRPF40A-204ENST00000450303 RAB26Q9ULW5 256 aa15.26■□□□□ 0.03
PRPF40A-204ENST00000450303 AKAP9Q99996 3911 aa15.26■□□□□ 0.03
PRPF40A-204ENST00000450303 A0A087WZY1 265 aa15.25■□□□□ 0.03
PRPF40A-204ENST00000450303 FAM221AA4D161 298 aa15.25■□□□□ 0.03
PRPF40A-204ENST00000450303 TMEM229AB2RXF0 380 aa15.25■□□□□ 0.03
PRPF40A-204ENST00000450303 FAAHO00519 579 aa15.25■□□□□ 0.03
PRPF40A-204ENST00000450303 FMO6PO60774 539 aa15.25■□□□□ 0.03
PRPF40A-204ENST00000450303 AQP8O94778 261 aa15.25■□□□□ 0.03
PRPF40A-204ENST00000450303 GKN3PP0CG01 181 aa15.25■□□□□ 0.03
PRPF40A-204ENST00000450303 TNFRSF1BP20333 461 aa15.25■□□□□ 0.03
PRPF40A-204ENST00000450303 IL11P20809 199 aa15.25■□□□□ 0.03
PRPF40A-204ENST00000450303 RYKP34925 604 aa15.25■□□□□ 0.03
PRPF40A-204ENST00000450303 SORDQ00796 357 aa15.25■□□□□ 0.03
PRPF40A-204ENST00000450303 FAM27E3Q08E93 113 aa15.25■□□□□ 0.03
PRPF40A-204ENST00000450303 EPS8Q12929 822 aa15.25■□□□□ 0.03
PRPF40A-204ENST00000450303 DAZAP2Q15038 168 aaPredicted RBP15.25■□□□□ 0.03
PRPF40A-204ENST00000450303 EEF1A1P5Q5VTE0 462 aa15.25■□□□□ 0.03
PRPF40A-204ENST00000450303 TMEM154Q6P9G4 183 aa15.25■□□□□ 0.03
PRPF40A-204ENST00000450303 CBLN3Q6UW01 205 aa15.25■□□□□ 0.03
PRPF40A-204ENST00000450303 DEF8Q6ZN54 512 aa15.25■□□□□ 0.03
PRPF40A-204ENST00000450303 GTPBP8Q8N3Z3 284 aaPredicted RBP15.25■□□□□ 0.03
PRPF40A-204ENST00000450303 FAM86B1Q8N7N1 296 aa15.25■□□□□ 0.03
PRPF40A-204ENST00000450303 OR6T1Q8NGN1 323 aa15.25■□□□□ 0.03
PRPF40A-204ENST00000450303 TMEM234Q8WY98 164 aa15.25■□□□□ 0.03
PRPF40A-204ENST00000450303 EME1Q96AY2 570 aa15.25■□□□□ 0.03
PRPF40A-204ENST00000450303 ARSGQ96EG1 525 aa15.25■□□□□ 0.03
PRPF40A-204ENST00000450303 ZNF347Q96SE7 839 aa15.25■□□□□ 0.03
PRPF40A-204ENST00000450303 MCHR1Q99705 422 aa15.25■□□□□ 0.03
PRPF40A-204ENST00000450303 PRRG4Q9BZD6 226 aa15.25■□□□□ 0.03
PRPF40A-204ENST00000450303 TRIM2Q9C040 744 aa15.25■□□□□ 0.03
PRPF40A-204ENST00000450303 SELENONQ9NZV5 590 aa15.25■□□□□ 0.03
PRPF40A-204ENST00000450303 ICAM5Q9UMF0 924 aa15.25■□□□□ 0.03
PRPF40A-204ENST00000450303 ENPP4Q9Y6X5 453 aa15.25■□□□□ 0.03
PRPF40A-204ENST00000450303 HEATR5AQ86XA9 2040 aa15.24■□□□□ 0.03
PRPF40A-204ENST00000450303 F8P00451 2351 aa15.24■□□□□ 0.03
PRPF40A-204ENST00000450303 FRS3O43559 492 aa15.24■□□□□ 0.03
PRPF40A-204ENST00000450303 CXCL13O43927 109 aa15.24■□□□□ 0.03
PRPF40A-204ENST00000450303 CRHP06850 196 aa15.24■□□□□ 0.03
PRPF40A-204ENST00000450303 ZNF17P17021 662 aa15.24■□□□□ 0.03
PRPF40A-204ENST00000450303 ART1P52961 327 aa15.24■□□□□ 0.03
PRPF40A-204ENST00000450303 IST1P53990 364 aa15.24■□□□□ 0.03
PRPF40A-204ENST00000450303 AQP4P55087 323 aa15.24■□□□□ 0.03
PRPF40A-204ENST00000450303 POU4F3Q15319 338 aa15.24■□□□□ 0.03
PRPF40A-204ENST00000450303 PIWIL3Q7Z3Z3 882 aaKnown RBP15.24■□□□□ 0.03
PRPF40A-204ENST00000450303 PAPD5Q8NDF8 572 aaKnown RBP15.24■□□□□ 0.03
PRPF40A-204ENST00000450303 ZBTB8AQ96BR9 441 aa15.24■□□□□ 0.03
PRPF40A-204ENST00000450303 CHID1Q9BWS9 393 aa15.24■□□□□ 0.03
PRPF40A-204ENST00000450303 RSPO3Q9BXY4 272 aaPredicted RBP15.24■□□□□ 0.03
PRPF40A-204ENST00000450303 AMBRA1Q9C0C7 1298 aa15.24■□□□□ 0.03
PRPF40A-204ENST00000450303 RNF122Q9H9V4 155 aa15.24■□□□□ 0.03
PRPF40A-204ENST00000450303 CLEC4AQ9UMR7 237 aa15.24■□□□□ 0.03
PRPF40A-204ENST00000450303 ZNF175Q9Y473 711 aa15.24■□□□□ 0.03
PRPF40A-204ENST00000450303 HRNRQ86YZ3 2850 aaPredicted RBP15.24■□□□□ 0.03
PRPF40A-204ENST00000450303 A0A0J9YW62 118 aa15.23■□□□□ 0.03
PRPF40A-204ENST00000450303 SH3D21A4FU49 640 aa15.23■□□□□ 0.03
PRPF40A-204ENST00000450303 hCG_2039718K7EN88 272 aa15.23■□□□□ 0.03
PRPF40A-204ENST00000450303 TNFSF11O14788 317 aa15.23■□□□□ 0.03
PRPF40A-204ENST00000450303 MSTNO14793 375 aa15.23■□□□□ 0.03
PRPF40A-204ENST00000450303 BCAS1O75363 584 aaPredicted RBP15.23■□□□□ 0.03
PRPF40A-204ENST00000450303 SEMG1P04279 462 aa15.23■□□□□ 0.03
PRPF40A-204ENST00000450303 RHCEP18577 417 aa15.23■□□□□ 0.03
PRPF40A-204ENST00000450303 FASP25445 335 aa15.23■□□□□ 0.03
PRPF40A-204ENST00000450303 ACAA2P42765 397 aaKnown RBP15.23■□□□□ 0.03
PRPF40A-204ENST00000450303 IDH2P48735 452 aaKnown RBP15.23■□□□□ 0.03
PRPF40A-204ENST00000450303 SMIM11AP58511 58 aa15.23■□□□□ 0.03
PRPF40A-204ENST00000450303 TAS2R41P59536 307 aa15.23■□□□□ 0.03
PRPF40A-204ENST00000450303 RAC1P63000 192 aa15.23■□□□□ 0.03
PRPF40A-204ENST00000450303 FOXF1Q12946 379 aa15.23■□□□□ 0.03
PRPF40A-204ENST00000450303 TOMM34Q15785 309 aaPredicted RBP15.23■□□□□ 0.03
PRPF40A-204ENST00000450303 CTU2Q2VPK5 515 aaKnown RBP15.23■□□□□ 0.03
PRPF40A-204ENST00000450303 WBP2NLQ6ICG8 309 aa15.23■□□□□ 0.03
PRPF40A-204ENST00000450303 ZNF474Q6S9Z5 364 aaPredicted RBP15.23■□□□□ 0.03
PRPF40A-204ENST00000450303 PLEKHM3Q6ZWE6 761 aa15.23■□□□□ 0.03
PRPF40A-204ENST00000450303 COMTD1Q86VU5 262 aa15.23■□□□□ 0.03
PRPF40A-204ENST00000450303 CADM2Q8N3J6 435 aa15.23■□□□□ 0.03
PRPF40A-204ENST00000450303 ZNF610Q8N9Z0 462 aa15.23■□□□□ 0.03
PRPF40A-204ENST00000450303 OR10D3Q8NH80 312 aa15.23■□□□□ 0.03
PRPF40A-204ENST00000450303 GPR119Q8TDV5 335 aa15.23■□□□□ 0.03
PRPF40A-204ENST00000450303 ST8SIA1Q92185 356 aa15.23■□□□□ 0.03
PRPF40A-204ENST00000450303 C7orf34Q96L11 122 aa15.23■□□□□ 0.03
PRPF40A-204ENST00000450303 ZNF300Q96RE9 604 aaPredicted RBP15.23■□□□□ 0.03
PRPF40A-204ENST00000450303 PLEKHA6Q9Y2H5 1048 aa15.23■□□□□ 0.03
PRPF40A-204ENST00000450303 ABCA4P78363 2273 aa15.22■□□□□ 0.03
PRPF40A-204ENST00000450303 GNGT2O14610 69 aa15.22■□□□□ 0.03
PRPF40A-204ENST00000450303 DENRO43583 198 aaKnown RBP15.22■□□□□ 0.03
PRPF40A-204ENST00000450303 EFNA2O43921 213 aa15.22■□□□□ 0.03
PRPF40A-204ENST00000450303 CGAP01215 116 aa15.22■□□□□ 0.03
PRPF40A-204ENST00000450303 SHC1P29353 583 aa15.22■□□□□ 0.03
PRPF40A-204ENST00000450303 SFTPDP35247 375 aa15.22■□□□□ 0.03
PRPF40A-204ENST00000450303 MAGEA2P43356 314 aa15.22■□□□□ 0.03
PRPF40A-204ENST00000450303 HTR3AP46098 478 aa15.22■□□□□ 0.03
PRPF40A-204ENST00000450303 VLDLRP98155 873 aa15.22■□□□□ 0.03
PRPF40A-204ENST00000450303 PLAURQ03405 335 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms