RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 ZNF418Q8TF45 676 aaPredicted RBP12.44□□□□□ -0.42
HMGN1-208ENST00000443046 TWIST2Q8WVJ9 160 aa12.44□□□□□ -0.42
HMGN1-208ENST00000443046 TMEM186Q96B77 213 aa12.44□□□□□ -0.42
HMGN1-208ENST00000443046 PPP3R2Q96LZ3 170 aa12.44□□□□□ -0.42
HMGN1-208ENST00000443046 GATA5Q9BWX5 397 aaPredicted RBP12.44□□□□□ -0.42
HMGN1-208ENST00000443046 MOV10Q9HCE1 1003 aaKnown RBP12.44□□□□□ -0.42
HMGN1-208ENST00000443046 HIF1ANQ9NWT6 349 aa12.44□□□□□ -0.42
HMGN1-208ENST00000443046 PCDHB10Q9UN67 800 aa12.44□□□□□ -0.42
HMGN1-208ENST00000443046 LIPT2A6NK58 231 aa12.43□□□□□ -0.42
HMGN1-208ENST00000443046 CLDN24A6NM45 220 aa12.43□□□□□ -0.42
HMGN1-208ENST00000443046 FAAHO00519 579 aa12.43□□□□□ -0.42
HMGN1-208ENST00000443046 PRPS1L1P21108 318 aa12.43□□□□□ -0.42
HMGN1-208ENST00000443046 POLR2HP52434 150 aaKnown RBP12.43□□□□□ -0.42
HMGN1-208ENST00000443046 ATP6AP1LQ52LC2 224 aa12.43□□□□□ -0.42
HMGN1-208ENST00000443046 C6orf136Q5SQH8 315 aa12.43□□□□□ -0.42
HMGN1-208ENST00000443046 OTUD3Q5T2D3 398 aaPredicted RBP12.43□□□□□ -0.42
HMGN1-208ENST00000443046 C16orf62Q7Z3J2 963 aa12.43□□□□□ -0.42
HMGN1-208ENST00000443046 C10orf107Q8IVU9 208 aa12.43□□□□□ -0.42
HMGN1-208ENST00000443046 DDIASQ8IXT1 998 aa12.43□□□□□ -0.42
HMGN1-208ENST00000443046 CDK20Q8IZL9 346 aa12.43□□□□□ -0.42
HMGN1-208ENST00000443046 CLEC4FQ8N1N0 589 aa12.43□□□□□ -0.42
HMGN1-208ENST00000443046 ARFGAP2Q8N6H7 521 aa12.43□□□□□ -0.42
HMGN1-208ENST00000443046 NOA1Q8NC60 698 aaKnown RBP12.43□□□□□ -0.42
HMGN1-208ENST00000443046 CLDND2Q8NHS1 167 aa12.43□□□□□ -0.42
HMGN1-208ENST00000443046 ANKRD27Q96NW4 1050 aa12.43□□□□□ -0.42
HMGN1-208ENST00000443046 PRPF18Q99633 342 aaKnown RBP12.43□□□□□ -0.42
HMGN1-208ENST00000443046 DUSP26Q9BV47 211 aa12.43□□□□□ -0.42
HMGN1-208ENST00000443046 RBM4Q9BWF3 364 aaKnown RBP12.43□□□□□ -0.42
HMGN1-208ENST00000443046 OR51I1Q9H343 314 aa12.43□□□□□ -0.42
HMGN1-208ENST00000443046 ZNF696Q9H7X3 374 aa12.43□□□□□ -0.42
HMGN1-208ENST00000443046 GRPEL1Q9HAV7 217 aa12.43□□□□□ -0.42
HMGN1-208ENST00000443046 EXD2Q9NVH0 621 aa12.43□□□□□ -0.42
HMGN1-208ENST00000443046 TBK1Q9UHD2 729 aa12.43□□□□□ -0.42
HMGN1-208ENST00000443046 WDR45Q9Y484 360 aa12.43□□□□□ -0.42
HMGN1-208ENST00000443046 PRAMEF27A3QJZ7 478 aa12.42□□□□□ -0.42
HMGN1-208ENST00000443046 ZNF587BE7ETH6 402 aa12.42□□□□□ -0.42
HMGN1-208ENST00000443046 TRIM77I1YAP6 450 aa12.42□□□□□ -0.42
HMGN1-208ENST00000443046 AP3D1O14617 1153 aa12.42□□□□□ -0.42
HMGN1-208ENST00000443046 CFLARO15519 480 aa12.42□□□□□ -0.42
HMGN1-208ENST00000443046 PEX11AO75192 247 aa12.42□□□□□ -0.42
HMGN1-208ENST00000443046 AKR7A3O95154 331 aa12.42□□□□□ -0.42
HMGN1-208ENST00000443046 AGR2O95994 175 aa12.42□□□□□ -0.42
HMGN1-208ENST00000443046 MSMBP08118 114 aa12.42□□□□□ -0.42
HMGN1-208ENST00000443046 CELA3BP08861 270 aa12.42□□□□□ -0.42
HMGN1-208ENST00000443046 TACR3P29371 465 aa12.42□□□□□ -0.42
HMGN1-208ENST00000443046 CCT5P48643 541 aa12.42□□□□□ -0.42
HMGN1-208ENST00000443046 SELENOPP49908 381 aa12.42□□□□□ -0.42
HMGN1-208ENST00000443046 UBE2NP61088 152 aaKnown RBP12.42□□□□□ -0.42
HMGN1-208ENST00000443046 TUBA1BP68363 451 aa12.42□□□□□ -0.42
HMGN1-208ENST00000443046 TUBA4AP68366 448 aa12.42□□□□□ -0.42
HMGN1-208ENST00000443046 PCLAFQ15004 111 aa12.42□□□□□ -0.42
HMGN1-208ENST00000443046 PDLIM3Q53GG5 364 aaPredicted RBP12.42□□□□□ -0.42
HMGN1-208ENST00000443046 ELFN2Q5R3F8 820 aa12.42□□□□□ -0.42
HMGN1-208ENST00000443046 C1orf229Q6ZS94 237 aaPredicted RBP12.42□□□□□ -0.42
HMGN1-208ENST00000443046 CREB3L2Q70SY1 520 aa12.42□□□□□ -0.42
HMGN1-208ENST00000443046 TUBA1AQ71U36 451 aa12.42□□□□□ -0.42
HMGN1-208ENST00000443046 SPATA21Q7Z572 469 aa12.42□□□□□ -0.42
HMGN1-208ENST00000443046 CLECL1Q8IZS7 167 aa12.42□□□□□ -0.42
HMGN1-208ENST00000443046 CKAP2Q8WWK9 683 aa12.42□□□□□ -0.42
HMGN1-208ENST00000443046 CNOT9Q92600 299 aaKnown RBP12.42□□□□□ -0.42
HMGN1-208ENST00000443046 ROPN1LQ96C74 230 aa12.42□□□□□ -0.42
HMGN1-208ENST00000443046 SLC35G5Q96KT7 338 aa12.42□□□□□ -0.42
HMGN1-208ENST00000443046 C3orf30Q96M34 536 aa12.42□□□□□ -0.42
HMGN1-208ENST00000443046 C1orf50Q9BV19 199 aa12.42□□□□□ -0.42
HMGN1-208ENST00000443046 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.42□□□□□ -0.42
HMGN1-208ENST00000443046 IGHV2OR16-5A0A0B4J2B6 119 aa12.41□□□□□ -0.42
HMGN1-208ENST00000443046 RNF103-CHMP3A0A140T963 221 aa12.41□□□□□ -0.42
HMGN1-208ENST00000443046 OR6C65A6NJZ3 312 aa12.41□□□□□ -0.42
HMGN1-208ENST00000443046 VSTM5A8MXK1 200 aa12.41□□□□□ -0.42
HMGN1-208ENST00000443046 TMEM229AB2RXF0 380 aa12.41□□□□□ -0.42
HMGN1-208ENST00000443046 UPK3AO75631 287 aa12.41□□□□□ -0.42
HMGN1-208ENST00000443046 GPIP06744 558 aa12.41□□□□□ -0.42
HMGN1-208ENST00000443046 CHRNGP07510 517 aa12.41□□□□□ -0.42
HMGN1-208ENST00000443046 ADRA2AP08913 450 aa12.41□□□□□ -0.42
HMGN1-208ENST00000443046 OR12D1P0DN82 309 aa12.41□□□□□ -0.42
HMGN1-208ENST00000443046 CBR1P16152 277 aa12.41□□□□□ -0.42
HMGN1-208ENST00000443046 SOAT1P35610 550 aa12.41□□□□□ -0.42
HMGN1-208ENST00000443046 LIMS1P48059 325 aa12.41□□□□□ -0.42
HMGN1-208ENST00000443046 CEACAM7Q14002 265 aa12.41□□□□□ -0.42
HMGN1-208ENST00000443046 FAM153CQ494X1 144 aa12.41□□□□□ -0.42
HMGN1-208ENST00000443046 AWAT1Q58HT5 328 aa12.41□□□□□ -0.42
HMGN1-208ENST00000443046 IL23RQ5VWK5 629 aa12.41□□□□□ -0.42
HMGN1-208ENST00000443046 CARM1Q86X55 608 aa12.41□□□□□ -0.42
HMGN1-208ENST00000443046 CMIPQ8IY22 773 aa12.41□□□□□ -0.42
HMGN1-208ENST00000443046 ANKK1Q8NFD2 765 aa12.41□□□□□ -0.42
HMGN1-208ENST00000443046 XAGE5Q8WWM1 108 aa12.41□□□□□ -0.42
HMGN1-208ENST00000443046 ALKBH3Q96Q83 286 aaPredicted RBP12.41□□□□□ -0.42
HMGN1-208ENST00000443046 TXLNGYQ9BZA5 131 aa12.41□□□□□ -0.42
HMGN1-208ENST00000443046 LINC00470Q9BZP3 86 aa12.41□□□□□ -0.42
HMGN1-208ENST00000443046 GRIP1Q9Y3R0 1128 aa12.41□□□□□ -0.42
HMGN1-208ENST00000443046 A0A096LPE4 126 aa12.4□□□□□ -0.42
HMGN1-208ENST00000443046 A0A1W2PPZ6 126 aa12.4□□□□□ -0.42
HMGN1-208ENST00000443046 SH3PXD2BA1X283 911 aa12.4□□□□□ -0.42
HMGN1-208ENST00000443046 ZNF503-AS2A6NEH8 195 aa12.4□□□□□ -0.42
HMGN1-208ENST00000443046 RPL36A-HNRNPH2H7BZ11 118 aa12.4□□□□□ -0.42
HMGN1-208ENST00000443046 RNASET2O00584 256 aaKnown RBP12.4□□□□□ -0.42
HMGN1-208ENST00000443046 WNT9BO14905 357 aa12.4□□□□□ -0.42
HMGN1-208ENST00000443046 TMPRSS2O15393 492 aa12.4□□□□□ -0.42
HMGN1-208ENST00000443046 TRIM13O60858 407 aa12.4□□□□□ -0.42
HMGN1-208ENST00000443046 SCN2BO60939 215 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms