RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 ENPP1P22413 925 aa15.14■□□□□ 0.01
SEMA3B-207ENST00000441915 HNRNPA2B1P22626 353 aaKnown RBP15.14■□□□□ 0.01
SEMA3B-207ENST00000441915 GDNFP39905 211 aa15.14■□□□□ 0.01
SEMA3B-207ENST00000441915 DIO1P49895 249 aa15.14■□□□□ 0.01
SEMA3B-207ENST00000441915 GPR143P51810 404 aa15.14■□□□□ 0.01
SEMA3B-207ENST00000441915 ILF3Q12906 894 aaKnown RBP eCLIP15.14■□□□□ 0.01
SEMA3B-207ENST00000441915 KLF9Q13886 244 aaPredicted RBP15.14■□□□□ 0.01
SEMA3B-207ENST00000441915 PXDC1Q5TGL8 231 aa15.14■□□□□ 0.01
SEMA3B-207ENST00000441915 MTFR2Q6P444 385 aa15.14■□□□□ 0.01
SEMA3B-207ENST00000441915 KIRREL2Q6UWL6 708 aa15.14■□□□□ 0.01
SEMA3B-207ENST00000441915 FGD2Q7Z6J4 655 aa15.14■□□□□ 0.01
SEMA3B-207ENST00000441915 OR11H4Q8NGC9 324 aa15.14■□□□□ 0.01
SEMA3B-207ENST00000441915 OR51Q1Q8NH59 317 aa15.14■□□□□ 0.01
SEMA3B-207ENST00000441915 PHYHIPQ92561 330 aa15.14■□□□□ 0.01
SEMA3B-207ENST00000441915 ORAI3Q9BRQ5 295 aa15.14■□□□□ 0.01
SEMA3B-207ENST00000441915 CCDC86Q9H6F5 360 aaKnown RBP15.14■□□□□ 0.01
SEMA3B-207ENST00000441915 ELF5Q9UKW6 265 aaPredicted RBP15.14■□□□□ 0.01
SEMA3B-207ENST00000441915 GPRIN2O60269 458 aa15.14■□□□□ 0.01
SEMA3B-207ENST00000441915 IGKV1D-16P01601 117 aa15.14■□□□□ 0.01
SEMA3B-207ENST00000441915 ZNF687Q8N1G0 1237 aa15.14■□□□□ 0.01
SEMA3B-207ENST00000441915 BEST4Q8NFU0 473 aa15.14■□□□□ 0.01
SEMA3B-207ENST00000441915 OR6K6Q8NGW6 343 aa15.14■□□□□ 0.01
SEMA3B-207ENST00000441915 DERL3Q96Q80 235 aa15.14■□□□□ 0.01
SEMA3B-207ENST00000441915 NMNAT3Q96T66 252 aa15.14■□□□□ 0.01
SEMA3B-207ENST00000441915 AKAP7Q9P0M2 348 aaPredicted RBP15.14■□□□□ 0.01
SEMA3B-207ENST00000441915 NCDNQ9UBB6 729 aa15.14■□□□□ 0.01
SEMA3B-207ENST00000441915 PCDHGA9Q9Y5G4 932 aaKnown RBP15.14■□□□□ 0.01
SEMA3B-207ENST00000441915 GPR171O14626 319 aa15.13■□□□□ 0.01
SEMA3B-207ENST00000441915 SSNA1O43805 119 aa15.13■□□□□ 0.01
SEMA3B-207ENST00000441915 WNT1P04628 370 aa15.13■□□□□ 0.01
SEMA3B-207ENST00000441915 GUSBP08236 651 aa15.13■□□□□ 0.01
SEMA3B-207ENST00000441915 UQCRC1P31930 480 aa15.13■□□□□ 0.01
SEMA3B-207ENST00000441915 PSMB10P40306 273 aa15.13■□□□□ 0.01
SEMA3B-207ENST00000441915 FAM53BQ14153 422 aa15.13■□□□□ 0.01
SEMA3B-207ENST00000441915 FGFBP1Q14512 234 aa15.13■□□□□ 0.01
SEMA3B-207ENST00000441915 ST3GAL2Q16842 350 aa15.13■□□□□ 0.01
SEMA3B-207ENST00000441915 ALG11Q2TAA5 492 aa15.13■□□□□ 0.01
SEMA3B-207ENST00000441915 DPY19L2P2Q6ZN68 376 aa15.13■□□□□ 0.01
SEMA3B-207ENST00000441915 CMIPQ8IY22 773 aa15.13■□□□□ 0.01
SEMA3B-207ENST00000441915 IZUMO1Q8IYV9 350 aa15.13■□□□□ 0.01
SEMA3B-207ENST00000441915 HGDQ93099 445 aa15.13■□□□□ 0.01
SEMA3B-207ENST00000441915 MARVELD3Q96A59 401 aa15.13■□□□□ 0.01
SEMA3B-207ENST00000441915 RBM18Q96H35 190 aaKnown RBP15.13■□□□□ 0.01
SEMA3B-207ENST00000441915 HSPA12BQ96MM6 686 aa15.13■□□□□ 0.01
SEMA3B-207ENST00000441915 AUNIPQ9H7T9 357 aa15.13■□□□□ 0.01
SEMA3B-207ENST00000441915 NOX4Q9NPH5 578 aa15.13■□□□□ 0.01
SEMA3B-207ENST00000441915 CPNE7Q9UBL6 633 aa15.13■□□□□ 0.01
SEMA3B-207ENST00000441915 RANBP2P49792 3224 aaKnown RBP15.13■□□□□ 0.01
SEMA3B-207ENST00000441915 KLF8O95600 359 aaPredicted RBP15.13■□□□□ 0.01
SEMA3B-207ENST00000441915 SYPP08247 313 aa15.13■□□□□ 0.01
SEMA3B-207ENST00000441915 S1PR1P21453 382 aa15.13■□□□□ 0.01
SEMA3B-207ENST00000441915 ZSWIM7Q19AV6 140 aa15.13■□□□□ 0.01
SEMA3B-207ENST00000441915 SLC35D3Q5M8T2 416 aa15.13■□□□□ 0.01
SEMA3B-207ENST00000441915 LINGO2Q7L985 606 aa15.13■□□□□ 0.01
SEMA3B-207ENST00000441915 CDH24Q86UP0 819 aa15.13■□□□□ 0.01
SEMA3B-207ENST00000441915 CMTM4Q8IZR5 234 aa15.13■□□□□ 0.01
SEMA3B-207ENST00000441915 C7orf57Q8NEG2 295 aa15.13■□□□□ 0.01
SEMA3B-207ENST00000441915 ZNF275Q9NSD4 429 aaPredicted RBP15.13■□□□□ 0.01
SEMA3B-207ENST00000441915 POT1Q9NUX5 634 aa15.13■□□□□ 0.01
SEMA3B-207ENST00000441915 COPS3Q9UNS2 423 aa15.13■□□□□ 0.01
SEMA3B-207ENST00000441915 MEIKINA0A087WXM9 373 aa15.12■□□□□ 0.01
SEMA3B-207ENST00000441915 ANKRD61A6NGH8 418 aa15.12■□□□□ 0.01
SEMA3B-207ENST00000441915 LEUTXA8MZ59 168 aa15.12■□□□□ 0.01
SEMA3B-207ENST00000441915 ZNF593O00488 134 aaPredicted RBP15.12■□□□□ 0.01
SEMA3B-207ENST00000441915 SELENOFO60613 162 aa15.12■□□□□ 0.01
SEMA3B-207ENST00000441915 PPM1BO75688 479 aa15.12■□□□□ 0.01
SEMA3B-207ENST00000441915 SLC22A5O76082 557 aa15.12■□□□□ 0.01
SEMA3B-207ENST00000441915 RAF1P04049 648 aa15.12■□□□□ 0.01
SEMA3B-207ENST00000441915 TPOP07202 933 aa15.12■□□□□ 0.01
SEMA3B-207ENST00000441915 SULT1A3P0DMM9 295 aa15.12■□□□□ 0.01
SEMA3B-207ENST00000441915 SULT1A4P0DMN0 295 aa15.12■□□□□ 0.01
SEMA3B-207ENST00000441915 TYRP1P17643 537 aa15.12■□□□□ 0.01
SEMA3B-207ENST00000441915 UNQ9370/PRO34162Q6UXP9 181 aa15.12■□□□□ 0.01
SEMA3B-207ENST00000441915 NPEPL1Q8NDH3 523 aa15.12■□□□□ 0.01
SEMA3B-207ENST00000441915 ZNF680Q8NEM1 530 aa15.12■□□□□ 0.01
SEMA3B-207ENST00000441915 OR9A4Q8NGU2 314 aa15.12■□□□□ 0.01
SEMA3B-207ENST00000441915 RIT1Q92963 219 aa15.12■□□□□ 0.01
SEMA3B-207ENST00000441915 RBCK1Q9BYM8 510 aa15.12■□□□□ 0.01
SEMA3B-207ENST00000441915 C20orf85Q9H1P6 137 aa15.12■□□□□ 0.01
SEMA3B-207ENST00000441915 CD93Q9NPY3 652 aa15.12■□□□□ 0.01
SEMA3B-207ENST00000441915 RNF215Q9Y6U7 377 aa15.12■□□□□ 0.01
SEMA3B-207ENST00000441915 A0A087WUJ7 227 aa15.12■□□□□ 0.01
SEMA3B-207ENST00000441915 FAM221BA6H8Z2 402 aa15.12■□□□□ 0.01
SEMA3B-207ENST00000441915 PDCD5O14737 125 aa15.12■□□□□ 0.01
SEMA3B-207ENST00000441915 SPI1P17947 270 aa15.12■□□□□ 0.01
SEMA3B-207ENST00000441915 HSF2Q03933 536 aa15.12■□□□□ 0.01
SEMA3B-207ENST00000441915 ZNF141Q15928 474 aa15.12■□□□□ 0.01
SEMA3B-207ENST00000441915 COL28A1Q2UY09 1125 aa15.12■□□□□ 0.01
SEMA3B-207ENST00000441915 FAM69AQ5T7M9 428 aa15.12■□□□□ 0.01
SEMA3B-207ENST00000441915 FAM109BQ6ICB4 259 aaPredicted RBP15.12■□□□□ 0.01
SEMA3B-207ENST00000441915 OR8H3Q8N146 312 aa15.12■□□□□ 0.01
SEMA3B-207ENST00000441915 ZNF527Q8NB42 609 aa15.12■□□□□ 0.01
SEMA3B-207ENST00000441915 ZNRF4Q8WWF5 429 aa15.12■□□□□ 0.01
SEMA3B-207ENST00000441915 SPRTNQ9H040 489 aaPredicted RBP15.12■□□□□ 0.01
SEMA3B-207ENST00000441915 NKIRAS2Q9NYR9 191 aa15.12■□□□□ 0.01
SEMA3B-207ENST00000441915 IFITM5A6NNB3 132 aa15.11■□□□□ 0.01
SEMA3B-207ENST00000441915 ZNF749O43361 778 aa15.11■□□□□ 0.01
SEMA3B-207ENST00000441915 PEX14O75381 377 aa15.11■□□□□ 0.01
SEMA3B-207ENST00000441915 POU3F3P20264 500 aaPredicted RBP15.11■□□□□ 0.01
SEMA3B-207ENST00000441915 IL32P24001 234 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 151.8 ms