RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 EPPINO95925 133 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 C6P13671 934 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 ITPKBP27987 946 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 EIF1P41567 113 aaKnown RBP6.95□□□□□ -1.3
HDAC9-214ENST00000441542 P2RX1P51575 399 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 AP3S2P59780 193 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 TSPAN31Q12999 210 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 FZD5Q13467 585 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 SLC9A5Q14940 896 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 PEA15Q15121 130 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 GXYLT1Q4G148 440 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 FAM69AQ5T7M9 428 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 OLFML2AQ68BL7 652 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 TMEM220Q6QAJ8 160 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 GLB1LQ6UWU2 654 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 TMPRSS12Q86WS5 348 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 GTPBP8Q8N3Z3 284 aaPredicted RBP6.95□□□□□ -1.3
HDAC9-214ENST00000441542 FAM98AQ8NCA5 519 aaKnown RBP6.95□□□□□ -1.3
HDAC9-214ENST00000441542 OR52L1Q8NGH7 329 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 OR13C2Q8NGS9 318 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 OR6K6Q8NGW6 343 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 ACOT11Q8WXI4 607 aaPredicted RBP6.95□□□□□ -1.3
HDAC9-214ENST00000441542 RGP1Q92546 391 aaPredicted RBP6.95□□□□□ -1.3
HDAC9-214ENST00000441542 PRRC1Q96M27 445 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 C19orf43Q9BQ61 176 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 ZNF251Q9BRH9 671 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 TSPAN10Q9H1Z9 355 aaPredicted RBP6.95□□□□□ -1.3
HDAC9-214ENST00000441542 OR52D1Q9H346 318 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 ZNF334Q9HCZ1 680 aaPredicted RBP6.95□□□□□ -1.3
HDAC9-214ENST00000441542 CHMP1AQ9HD42 196 aaPredicted RBP6.95□□□□□ -1.3
HDAC9-214ENST00000441542 ISYNA1Q9NPH2 558 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 SHPKQ9UHJ6 478 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 SLC7A7Q9UM01 511 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 LAMA2P24043 3122 aaKnown RBP6.95□□□□□ -1.3
HDAC9-214ENST00000441542 USP34Q70CQ2 3546 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 SLC38A8A6NNN8 435 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 ADAM12O43184 909 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 FCMRO60667 390 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 PPP1R3DO95685 299 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 ACTL6AO96019 429 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 HMGN2P05204 90 aaKnown RBP6.95□□□□□ -1.3
HDAC9-214ENST00000441542 DDX6P26196 483 aaKnown RBP eCLIP6.95□□□□□ -1.3
HDAC9-214ENST00000441542 PSMB5P28074 263 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 HLA-FP30511 346 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 CRMP1Q14194 572 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 ENTPD8Q5MY95 495 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 C9orf64Q5T6V5 341 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 RNLSQ5VYX0 342 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 TXNDC8Q6A555 127 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 MRM1Q6IN84 353 aaKnown RBP6.95□□□□□ -1.3
HDAC9-214ENST00000441542 ADAM5Q6NVV9 412 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 FRRS1Q6ZNA5 592 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 FOXRED2Q8IWF2 684 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 OR4C16Q8NGL9 310 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 EDARADDQ8WWZ3 215 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 OSTF1Q92882 214 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 PNPLA2Q96AD5 504 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 S100PBPQ96BU1 408 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 SLC22A12Q96S37 553 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 RPS10P5Q9NQ39 176 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 ZFP57Q9NU63 452 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 DOCK1Q14185 1865 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 TMEM272A0A1B0GTI8 110 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 MEX3AA1L020 520 aaKnown RBP6.95□□□□□ -1.3
HDAC9-214ENST00000441542 GFYI3L273 518 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 OPN1MWP04001 364 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 ASGR1P07306 291 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 GP1BAP07359 652 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 SNRNP70P08621 437 aaKnown RBP6.95□□□□□ -1.3
HDAC9-214ENST00000441542 OPN1MW2P0DN77 364 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 OPN1MW3P0DN78 364 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 PGDP52209 483 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 PRKCZQ05513 592 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 POU4F2Q12837 409 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 TSC22D1Q15714 1073 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 KLHL26Q53HC5 615 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 PRAMEF17Q5VTA0 474 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 LYPLAL1Q5VWZ2 237 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 ZNF836Q6ZNA1 936 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 SLC29A4Q7RTT9 530 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 TMEM200AQ86VY9 491 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 NUDT13Q86X67 352 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 STEAP2Q8NFT2 490 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 SEMA6DQ8NFY4 1073 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 OR4K13Q8NH42 304 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 NEURL3Q96EH8 262 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 S100A16Q96FQ6 103 aaKnown RBP6.95□□□□□ -1.3
HDAC9-214ENST00000441542 MEGF10Q96KG7 1140 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 ZNF649Q9BS31 505 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 KATNBL1Q9H079 304 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 AKAP7Q9P0M2 348 aaPredicted RBP6.95□□□□□ -1.3
HDAC9-214ENST00000441542 ZNF346Q9UL40 294 aaKnown RBP6.95□□□□□ -1.3
HDAC9-214ENST00000441542 PCDHB8Q9UN66 801 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 ZNF337Q9Y3M9 751 aa6.95□□□□□ -1.3
HDAC9-214ENST00000441542 TRAV18A0A075B6X5 111 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 A0A0A6YYC8 382 aaPredicted RBP6.94□□□□□ -1.3
HDAC9-214ENST00000441542 A0A1B0GTH9 108 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 hCG_1809904A0A1W2PP81 198 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 A0A1W2PR64 198 aa6.94□□□□□ -1.3
HDAC9-214ENST00000441542 A0A1W2PRV1 198 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms