RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 BCL2L10Q9HD36 194 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 DUSP22Q9NRW4 184 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 DCAF13Q9NV06 445 aaKnown RBP4.3□□□□□ -1.72
PTPN4-206ENST00000441089 FLRT3Q9NZU0 649 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 P2RX2Q9UBL9 471 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 KCNE5Q9UJ90 142 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 ANGPT4Q9Y264 503 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 CHST2Q9Y4C5 530 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 TESMINQ9Y4I5 508 aa4.3□□□□□ -1.72
PTPN4-206ENST00000441089 TRBV11-1A0A0K0K1C0 115 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 A0A1W2PPR1 153 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 DHRS12A0PJE2 317 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 SYNDIG1LA6NDD5 238 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 FRG2CA6NGY1 282 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 CLDN24A6NM45 220 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 HSPB2A8KAH6 182 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 NPIPA2E9PIF3 369 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 NPIPB9F8W1W9 429 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 NPIPA3F8WFD2 350 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 H0YHG0 523 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 KLRC4-KLRK1H3BQV0 150 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 TO15178 435 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 HS6ST1O60243 411 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 KIAA0513O60268 411 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 FKBP6O75344 327 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 SLC25A12O75746 678 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 NEURL1O76050 574 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 KCNK2O95069 426 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 PAX1P15863 534 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 SRD5A1P18405 259 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 TNFRSF1BP20333 461 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 DRD5P21918 477 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 RPS4Y1P22090 263 aaKnown RBP4.29□□□□□ -1.72
PTPN4-206ENST00000441089 SLC7A1P30825 629 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 PIGAP37287 484 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 RBMXP38159 391 aaKnown RBP4.29□□□□□ -1.72
PTPN4-206ENST00000441089 PPICP45877 212 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 ANXA11P50995 505 aaKnown RBP4.29□□□□□ -1.72
PTPN4-206ENST00000441089 NR0B1P51843 470 aaKnown RBP4.29□□□□□ -1.72
PTPN4-206ENST00000441089 CRISP3P54108 245 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 POU6F2P78424 691 aaPredicted RBP4.29□□□□□ -1.72
PTPN4-206ENST00000441089 TXNL4AP83876 142 aaKnown RBP4.29□□□□□ -1.72
PTPN4-206ENST00000441089 VLDLRP98155 873 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 DBPQ10586 325 aaPredicted RBP4.29□□□□□ -1.72
PTPN4-206ENST00000441089 RIPK1Q13546 671 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 RCN1Q15293 331 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 HSPB2Q16082 182 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 ACKR1Q16570 336 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 DUSP7Q16829 419 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 MIDNQ504T8 468 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 GPAT3Q53EU6 434 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 CYBRD1Q53TN4 286 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 CMPK2Q5EBM0 449 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 C6orf163Q5TEZ5 329 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 PRAMEF8Q5VWM4 474 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 PRAMEF7Q5VXH5 474 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 FOXB2Q5VYV0 432 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 AP1ARQ63HQ0 302 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 AAGABQ6PD74 315 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 LRRC74BQ6ZQY2 392 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 VRK2Q86Y07 508 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 LACC1Q8IV20 430 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 SLC30A8Q8IWU4 369 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 PRR22Q8IZ63 422 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 METTL25Q8N6Q8 603 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 STPG3Q8N7X2 389 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 C3orf56Q8N813 242 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 COX18Q8N8Q8 333 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 SMYD1Q8NB12 490 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 PAPD5Q8NDF8 572 aaKnown RBP4.29□□□□□ -1.72
PTPN4-206ENST00000441089 C7orf57Q8NEG2 295 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 TNIP2Q8NFZ5 429 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 BBS10Q8TAM1 723 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 GPR151Q8TDV0 419 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 ELP5Q8TE02 316 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 METTL21AQ8WXB1 218 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 DAZLQ92904 295 aaKnown RBP4.29□□□□□ -1.72
PTPN4-206ENST00000441089 FBXW5Q969U6 566 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 VMP1Q96GC9 406 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 PYURFQ96I23 114 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 RSRC1Q96IZ7 334 aaKnown RBP4.29□□□□□ -1.72
PTPN4-206ENST00000441089 ART5Q96L15 291 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 LRGUKQ96M69 825 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 DACH2Q96NX9 599 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 COL21A1Q96P44 957 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 TRNT1Q96Q11 434 aaKnown RBP4.29□□□□□ -1.72
PTPN4-206ENST00000441089 GAL3ST4Q96RP7 486 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 SEPHS2Q99611 448 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 LPAR4Q99677 370 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 PKP2Q99959 881 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 BTBD2Q9BX70 525 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 RTN4RQ9BZR6 473 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 TRIM15Q9C019 465 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 WWTR1Q9GZV5 400 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 CXorf56Q9H5V9 222 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 SEC61A2Q9H9S3 476 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 RNPEPL1Q9HAU8 725 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 Q9N2J8 555 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 EXD2Q9NVH0 621 aa4.29□□□□□ -1.72
PTPN4-206ENST00000441089 ARMC1Q9NVT9 282 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms