RNA–Protein interactions for RNA: ENST00000440447.2

PTX4-202, Transcript of pentraxin 4, humanhuman

TSL 5 BASIC

Gene PTX4, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-202ENST00000440447 PIGMQ9H3S5 423 aa16.3■□□□□ 0.2
PTX4-202ENST00000440447 FAM32AQ9Y421 112 aaKnown RBP16.3■□□□□ 0.2
PTX4-202ENST00000440447 KLF2Q9Y5W3 355 aaPredicted RBP16.3■□□□□ 0.2
PTX4-202ENST00000440447 NCOA6Q14686 2063 aaPredicted RBP16.3■□□□□ 0.2
PTX4-202ENST00000440447 ARHGAP21Q5T5U3 1957 aa16.29■□□□□ 0.2
PTX4-202ENST00000440447 NKX2-6A6NCS4 301 aa16.29■□□□□ 0.2
PTX4-202ENST00000440447 EEF1E1-BLOC1S5C9J1V9 151 aa16.29■□□□□ 0.2
PTX4-202ENST00000440447 J3KTA2 159 aa16.29■□□□□ 0.2
PTX4-202ENST00000440447 EEF1E1O43324 174 aaKnown RBP16.29■□□□□ 0.2
PTX4-202ENST00000440447 AKR7A3O95154 331 aa16.29■□□□□ 0.2
PTX4-202ENST00000440447 YES1P07947 543 aa16.29■□□□□ 0.2
PTX4-202ENST00000440447 H3F3AP84243 136 aa16.29■□□□□ 0.2
PTX4-202ENST00000440447 FOXD4Q12950 439 aaPredicted RBP16.29■□□□□ 0.2
PTX4-202ENST00000440447 MFSD13AQ14CX5 517 aa16.29■□□□□ 0.2
PTX4-202ENST00000440447 PDK3Q15120 406 aa16.29■□□□□ 0.2
PTX4-202ENST00000440447 GUSBP1Q15486 140 aa16.29■□□□□ 0.2
PTX4-202ENST00000440447 TMEM201Q5SNT2 666 aa16.29■□□□□ 0.2
PTX4-202ENST00000440447 OTUD3Q5T2D3 398 aaPredicted RBP16.29■□□□□ 0.2
PTX4-202ENST00000440447 ABLIM2Q6H8Q1 611 aa16.29■□□□□ 0.2
PTX4-202ENST00000440447 VWA1Q6PCB0 445 aa16.29■□□□□ 0.2
PTX4-202ENST00000440447 MAMDC2Q7Z304 686 aaPredicted RBP16.29■□□□□ 0.2
PTX4-202ENST00000440447 NKAIN4Q8IVV8 208 aa16.29■□□□□ 0.2
PTX4-202ENST00000440447 CCDC103Q8IW40 242 aa16.29■□□□□ 0.2
PTX4-202ENST00000440447 OFCC1Q8IZS5 231 aa16.29■□□□□ 0.2
PTX4-202ENST00000440447 C10orf53Q8N6V4 93 aa16.29■□□□□ 0.2
PTX4-202ENST00000440447 OR6K3Q8NGY3 331 aa16.29■□□□□ 0.2
PTX4-202ENST00000440447 OR6S1Q8NH40 331 aa16.29■□□□□ 0.2
PTX4-202ENST00000440447 POP5Q969H6 163 aaKnown RBP16.29■□□□□ 0.2
PTX4-202ENST00000440447 STARD4Q96DR4 205 aa16.29■□□□□ 0.2
PTX4-202ENST00000440447 C7orf34Q96L11 122 aa16.29■□□□□ 0.2
PTX4-202ENST00000440447 HS6ST2Q96MM7 605 aa16.29■□□□□ 0.2
PTX4-202ENST00000440447 PSD2Q9BQI7 771 aa16.29■□□□□ 0.2
PTX4-202ENST00000440447 CADM1Q9BY67 442 aaKnown RBP16.29■□□□□ 0.2
PTX4-202ENST00000440447 SLC19A3Q9BZV2 496 aa16.29■□□□□ 0.2
PTX4-202ENST00000440447 TRIM15Q9C019 465 aa16.29■□□□□ 0.2
PTX4-202ENST00000440447 KLHL13Q9P2N7 655 aa16.29■□□□□ 0.2
PTX4-202ENST00000440447 ZNF814B7Z6K7 855 aa16.28■□□□□ 0.2
PTX4-202ENST00000440447 FTCDNL1E5RQL4 147 aa16.28■□□□□ 0.2
PTX4-202ENST00000440447 PRSS44E7EML9 344 aa16.28■□□□□ 0.2
PTX4-202ENST00000440447 hCG_2039718K7EN88 272 aa16.28■□□□□ 0.2
PTX4-202ENST00000440447 SMNDC1O75940 238 aaKnown RBP eCLIP16.28■□□□□ 0.2
PTX4-202ENST00000440447 CLDN1O95832 211 aa16.28■□□□□ 0.2
PTX4-202ENST00000440447 ITGA2P17301 1181 aa16.28■□□□□ 0.2
PTX4-202ENST00000440447 RHCEP18577 417 aa16.28■□□□□ 0.2
PTX4-202ENST00000440447 AGTR1P30556 359 aa16.28■□□□□ 0.2
PTX4-202ENST00000440447 RBM34P42696 430 aaKnown RBP16.28■□□□□ 0.2
PTX4-202ENST00000440447 ASCL1P50553 236 aa16.28■□□□□ 0.2
PTX4-202ENST00000440447 TRAM2Q15035 370 aa16.28■□□□□ 0.2
PTX4-202ENST00000440447 BTLAQ7Z6A9 289 aa16.28■□□□□ 0.2
PTX4-202ENST00000440447 TUSC5Q8IXB3 177 aa16.28■□□□□ 0.2
PTX4-202ENST00000440447 TMEM99Q8N816 258 aa16.28■□□□□ 0.2
PTX4-202ENST00000440447 LRRC46Q96FV0 321 aa16.28■□□□□ 0.2
PTX4-202ENST00000440447 ZNF300Q96RE9 604 aaPredicted RBP16.28■□□□□ 0.2
PTX4-202ENST00000440447 ZNF426Q9BUY5 554 aa16.28■□□□□ 0.2
PTX4-202ENST00000440447 BCO1Q9HAY6 547 aa16.28■□□□□ 0.2
PTX4-202ENST00000440447 NDUFAF4Q9P032 175 aa16.28■□□□□ 0.2
PTX4-202ENST00000440447 EMC3Q9P0I2 261 aa16.28■□□□□ 0.2
PTX4-202ENST00000440447 C6orf203Q9P0P8 240 aaPredicted RBP16.28■□□□□ 0.2
PTX4-202ENST00000440447 RHCGQ9UBD6 479 aa16.28■□□□□ 0.2
PTX4-202ENST00000440447 PROCRQ9UNN8 238 aa16.28■□□□□ 0.2
PTX4-202ENST00000440447 LRRK2Q5S007 2527 aa16.28■□□□□ 0.2
PTX4-202ENST00000440447 DOPEY1Q5JWR5 2465 aa16.28■□□□□ 0.2
PTX4-202ENST00000440447 AQP7P3A6NL99 342 aa16.27■□□□□ 0.2
PTX4-202ENST00000440447 ZNF724A8MTY0 619 aa16.27■□□□□ 0.2
PTX4-202ENST00000440447 KPNA4O00629 521 aaPredicted RBP16.27■□□□□ 0.2
PTX4-202ENST00000440447 ACOT8O14734 319 aa16.27■□□□□ 0.2
PTX4-202ENST00000440447 FFAR1O14842 300 aa16.27■□□□□ 0.2
PTX4-202ENST00000440447 SEMG1P04279 462 aa16.27■□□□□ 0.2
PTX4-202ENST00000440447 CBLP22681 906 aa16.27■□□□□ 0.2
PTX4-202ENST00000440447 VLDLRP98155 873 aa16.27■□□□□ 0.2
PTX4-202ENST00000440447 TMEM225Q6GV28 225 aa16.27■□□□□ 0.2
PTX4-202ENST00000440447 TSEN54Q7Z6J9 526 aaKnown RBP16.27■□□□□ 0.2
PTX4-202ENST00000440447 TMEM255BQ8WV15 326 aa16.27■□□□□ 0.2
PTX4-202ENST00000440447 TMEM239Q8WW34 195 aa16.27■□□□□ 0.2
PTX4-202ENST00000440447 SEPHS2Q99611 448 aa16.27■□□□□ 0.2
PTX4-202ENST00000440447 ASPNQ9BXN1 380 aa16.27■□□□□ 0.2
PTX4-202ENST00000440447 KLHL4Q9C0H6 718 aa16.27■□□□□ 0.2
PTX4-202ENST00000440447 LRMDAQ9H2I8 198 aa16.27■□□□□ 0.2
PTX4-202ENST00000440447 MMADHCQ9H3L0 296 aaPredicted RBP16.27■□□□□ 0.2
PTX4-202ENST00000440447 ING1Q9UK53 422 aaPredicted RBP16.27■□□□□ 0.2
PTX4-202ENST00000440447 CORINQ9Y5Q5 1042 aa16.27■□□□□ 0.2
PTX4-202ENST00000440447 IGKV3D-15A0A087WSY6 115 aa16.26■□□□□ 0.19
PTX4-202ENST00000440447 TCRBV5S2A0A599 114 aa16.26■□□□□ 0.19
PTX4-202ENST00000440447 ZNF716A6NP11 495 aa16.26■□□□□ 0.19
PTX4-202ENST00000440447 GPR171O14626 319 aa16.26■□□□□ 0.19
PTX4-202ENST00000440447 MSTNO14793 375 aa16.26■□□□□ 0.19
PTX4-202ENST00000440447 RAMP1O60894 148 aa16.26■□□□□ 0.19
PTX4-202ENST00000440447 FZD7O75084 574 aa16.26■□□□□ 0.19
PTX4-202ENST00000440447 PRSS23O95084 383 aa16.26■□□□□ 0.19
PTX4-202ENST00000440447 VAMP5O95183 116 aa16.26■□□□□ 0.19
PTX4-202ENST00000440447 MT-ATP6P00846 226 aa16.26■□□□□ 0.19
PTX4-202ENST00000440447 BGLAPP02818 100 aa16.26■□□□□ 0.19
PTX4-202ENST00000440447 FABP3P05413 133 aa16.26■□□□□ 0.19
PTX4-202ENST00000440447 CD8BP10966 210 aa16.26■□□□□ 0.19
PTX4-202ENST00000440447 GRPRP30550 384 aa16.26■□□□□ 0.19
PTX4-202ENST00000440447 SLC16A1P53985 500 aa16.26■□□□□ 0.19
PTX4-202ENST00000440447 LUZP2Q86TE4 346 aa16.26■□□□□ 0.19
PTX4-202ENST00000440447 ZNF775Q96BV0 537 aaPredicted RBP16.26■□□□□ 0.19
PTX4-202ENST00000440447 SF3B5Q9BWJ5 86 aaKnown RBP16.26■□□□□ 0.19
PTX4-202ENST00000440447 CHST11Q9NPF2 352 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms