RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 ZFP82Q8N141 532 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 PXT1Q8NFP0 134 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 CD99L2Q8TCZ2 262 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 C2CD4CQ8TF44 421 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 MS4A6EQ96DS6 147 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 ARHGDIGQ99819 225 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 ATG5Q9H1Y0 275 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 ADGRL4Q9HBW9 690 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 GLS2Q9UI32 602 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 MRPS23Q9Y3D9 190 aaKnown RBP8.35□□□□□ -1.07
COPB1-202ENST00000439561 KCNMB2Q9Y691 235 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 TBC1D3EA0A087X179 549 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 A0A0A6YYD5 115 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 IFITM5A6NNB3 132 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 C1QTNF3-AMACRE9PGA6 284 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 TPPPO94811 219 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 TBX6O95947 436 aaPredicted RBP8.35□□□□□ -1.07
COPB1-202ENST00000439561 RLN2P04090 185 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 F3P13726 295 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 HIST1H1CP16403 213 aaKnown RBP8.35□□□□□ -1.07
COPB1-202ENST00000439561 VASPP50552 380 aaPredicted RBP8.35□□□□□ -1.07
COPB1-202ENST00000439561 GUCA2AQ02747 115 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 MFSD12Q6NUT3 480 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 ZCCHC12Q6PEW1 402 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 GLDNQ6ZMI3 551 aaPredicted RBP8.35□□□□□ -1.07
COPB1-202ENST00000439561 CCDC36Q8IYA8 594 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 LINC01555Q8NAE3 123 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 ZNF485Q8NCK3 441 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 OR6N2Q8NGY6 317 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 SFXN5Q8TD22 340 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 NSMAFQ92636 917 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 SMIM19Q96E16 107 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 TOE1Q96GM8 510 aaKnown RBP8.35□□□□□ -1.07
COPB1-202ENST00000439561 ZNF578Q96N58 590 aaPredicted RBP8.35□□□□□ -1.07
COPB1-202ENST00000439561 MKKSQ9NPJ1 570 aaPredicted RBP8.35□□□□□ -1.07
COPB1-202ENST00000439561 INPP5EQ9NRR6 644 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 ACTR10Q9NZ32 417 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 PCDHGA5Q9Y5G8 931 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 HCFC2Q9Y5Z7 792 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 TMEM72A0PK05 275 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 C5orf51A6NDU8 294 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 FAM74A7A6NL05 159 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 H7C1C5 153 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 CDC123O75794 336 aaPredicted RBP8.35□□□□□ -1.07
COPB1-202ENST00000439561 INHAP05111 366 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 ADH5P11766 374 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 RAB3AP20336 220 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 HOXD10P28358 340 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 P2RX1P51575 399 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 TAS2R20P59543 309 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 LCN6P62502 163 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 LTBQ06643 244 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 FAM74A3Q4VXF1 159 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 DCST2Q5T1A1 773 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 LEG1Q6P5S2 330 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 GRASPQ7Z6J2 395 aaPredicted RBP8.35□□□□□ -1.07
COPB1-202ENST00000439561 PARGQ86W56 976 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 ZNF227Q86WZ6 799 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 SLC39A11Q8N1S5 342 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 CHST4Q8NCG5 386 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 TSSK2Q96PF2 358 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 ZNF346Q9UL40 294 aaKnown RBP8.35□□□□□ -1.07
COPB1-202ENST00000439561 ZMIZ1Q9ULJ6 1067 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 SDK1Q7Z5N4 2213 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 ASCC3Q8N3C0 2202 aaKnown RBP8.34□□□□□ -1.07
COPB1-202ENST00000439561 C17orf113A0A1B0GUU1 675 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 ZNF705EA8MWA4 302 aaPredicted RBP8.34□□□□□ -1.07
COPB1-202ENST00000439561 DOK2O60496 412 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 FARS2O95363 451 aaKnown RBP8.34□□□□□ -1.07
COPB1-202ENST00000439561 TGM6O95932 706 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 TMIGD3P0DMS9 266 aaPredicted RBP8.34□□□□□ -1.07
COPB1-202ENST00000439561 CTSAP10619 480 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 EFNB1P98172 346 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 ACSM1Q08AH1 577 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 SQSTM1Q13501 440 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 DHCR24Q15392 516 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 PSRC1Q6PGN9 363 aaPredicted RBP8.34□□□□□ -1.07
COPB1-202ENST00000439561 UNQ6126/PRO20091Q6UXV3 157 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 TMEM64Q6YI46 380 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 WDR88Q6ZMY6 472 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 ERN2Q76MJ5 926 aaKnown RBP8.34□□□□□ -1.07
COPB1-202ENST00000439561 SPAG16Q8N0X2 631 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 LNX2Q8N448 690 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 SLAIN1Q8ND83 568 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 OR51D1Q8NGF3 324 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 OR52E1Q8NGJ3 308 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 RASD2Q96D21 266 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 SDF2Q99470 211 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 CCDC3Q9BQI4 270 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 COMMD4Q9H0A8 199 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 EVA1AQ9H8M9 152 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 SPHK1Q9NYA1 384 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 TAS2R5Q9NYW4 299 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 EDARQ9UNE0 448 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 A0A0G2JK05 382 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 MFSD2BA6NFX1 497 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 EEF1E1-BLOC1S5C9J1V9 151 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 F8W036 122 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 M0QYG6 137 aa8.34□□□□□ -1.07
COPB1-202ENST00000439561 AIPO00170 330 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms