RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 PRR32B1ATL7 298 aa12.31□□□□□ -0.44
ACTN1-204ENST00000438964 DOK2O60496 412 aa12.31□□□□□ -0.44
ACTN1-204ENST00000438964 PRAMEF2O60811 474 aa12.31□□□□□ -0.44
ACTN1-204ENST00000438964 NFYBP25208 207 aa12.31□□□□□ -0.44
ACTN1-204ENST00000438964 FRKP42685 505 aaPredicted RBP12.31□□□□□ -0.44
ACTN1-204ENST00000438964 EFNB2P52799 333 aa12.31□□□□□ -0.44
ACTN1-204ENST00000438964 SIRPAP78324 504 aa12.31□□□□□ -0.44
ACTN1-204ENST00000438964 CDK5R1Q15078 307 aa12.31□□□□□ -0.44
ACTN1-204ENST00000438964 OR7A5Q15622 319 aa12.31□□□□□ -0.44
ACTN1-204ENST00000438964 FNDC3BQ53EP0 1204 aaKnown RBP12.31□□□□□ -0.44
ACTN1-204ENST00000438964 LDLRAD3Q86YD5 345 aa12.31□□□□□ -0.44
ACTN1-204ENST00000438964 KLHDC8AQ8IYD2 350 aa12.31□□□□□ -0.44
ACTN1-204ENST00000438964 OR6V1Q8N148 313 aa12.31□□□□□ -0.44
ACTN1-204ENST00000438964 OR2AK2Q8NG84 335 aa12.31□□□□□ -0.44
ACTN1-204ENST00000438964 TCEAL4Q96EI5 215 aa12.31□□□□□ -0.44
ACTN1-204ENST00000438964 MEPEQ9NQ76 525 aaPredicted RBP12.31□□□□□ -0.44
ACTN1-204ENST00000438964 ACSS1Q9NUB1 689 aaPredicted RBP12.31□□□□□ -0.44
ACTN1-204ENST00000438964 SCN5AQ14524 2016 aa12.31□□□□□ -0.44
ACTN1-204ENST00000438964 FRMPD3Q5JV73 1810 aa12.31□□□□□ -0.44
ACTN1-204ENST00000438964 LRIT2A6NDA9 550 aa12.31□□□□□ -0.44
ACTN1-204ENST00000438964 OR6C68A6NDL8 312 aa12.31□□□□□ -0.44
ACTN1-204ENST00000438964 SLC22A31A6NKX4 558 aa12.31□□□□□ -0.44
ACTN1-204ENST00000438964 OR52A4PA6NMU1 304 aa12.31□□□□□ -0.44
ACTN1-204ENST00000438964 GABARAPH6UMI1 98 aa12.31□□□□□ -0.44
ACTN1-204ENST00000438964 SIGLEC6O43699 453 aa12.31□□□□□ -0.44
ACTN1-204ENST00000438964 C6P13671 934 aa12.31□□□□□ -0.44
ACTN1-204ENST00000438964 ACADLP28330 430 aa12.31□□□□□ -0.44
ACTN1-204ENST00000438964 BCL6P41182 706 aa12.31□□□□□ -0.44
ACTN1-204ENST00000438964 AKR1C3P42330 323 aa12.31□□□□□ -0.44
ACTN1-204ENST00000438964 FLI1Q01543 452 aaPredicted RBP12.31□□□□□ -0.44
ACTN1-204ENST00000438964 TAF13Q15543 124 aa12.31□□□□□ -0.44
ACTN1-204ENST00000438964 HFEQ30201 348 aa12.31□□□□□ -0.44
ACTN1-204ENST00000438964 FAM69AQ5T7M9 428 aa12.31□□□□□ -0.44
ACTN1-204ENST00000438964 TSSK4Q6SA08 328 aa12.31□□□□□ -0.44
ACTN1-204ENST00000438964 RBMS3Q6XE24 437 aaKnown RBP12.31□□□□□ -0.44
ACTN1-204ENST00000438964 HSD17B13Q7Z5P4 300 aaPredicted RBP12.31□□□□□ -0.44
ACTN1-204ENST00000438964 ZNF546Q86UE3 836 aa12.31□□□□□ -0.44
ACTN1-204ENST00000438964 GLB1L2Q8IW92 636 aa12.31□□□□□ -0.44
ACTN1-204ENST00000438964 SFTPA1Q8IWL2 248 aa12.31□□□□□ -0.44
ACTN1-204ENST00000438964 OR1S2Q8NGQ3 325 aa12.31□□□□□ -0.44
ACTN1-204ENST00000438964 PNPLA2Q96AD5 504 aa12.31□□□□□ -0.44
ACTN1-204ENST00000438964 ZNF304Q9HCX3 659 aa12.31□□□□□ -0.44
ACTN1-204ENST00000438964 NRIP3Q9NQ35 241 aa12.31□□□□□ -0.44
ACTN1-204ENST00000438964 FOXJ3Q9UPW0 622 aa12.31□□□□□ -0.44
ACTN1-204ENST00000438964 ARPC4-TTLL3A0A0A6YYG9 625 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.3□□□□□ -0.44
ACTN1-204ENST00000438964 F8W036 122 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 M0QYG6 137 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 OR2A4O95047 310 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 SPP1P10451 314 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 HIST1H1CP16403 213 aaKnown RBP12.3□□□□□ -0.44
ACTN1-204ENST00000438964 MAOBP27338 520 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 ZNF136P52737 540 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 RAG2P55895 527 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 DLX5P56178 289 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 TAS2R20P59543 309 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 OR1Q1Q15612 314 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 DUSP5Q16690 384 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 FAM209BQ5JX69 171 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 MANEAQ5SRI9 462 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 MRPL2Q5T653 305 aaKnown RBP12.3□□□□□ -0.44
ACTN1-204ENST00000438964 NPAS4Q8IUM7 802 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 KCT2Q8NC54 265 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 FAM71CQ8NEG0 241 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 OR10AC1Q8NH08 325 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 SMIM19Q96E16 107 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 S100A16Q96FQ6 103 aaKnown RBP12.3□□□□□ -0.44
ACTN1-204ENST00000438964 MS4A4EQ96PG1 132 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 OR2A7Q96R45 310 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 EXO5Q9H790 373 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 TMEM74BQ9NUR3 256 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 IL36AQ9UHA7 158 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 GLS2Q9UI32 602 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 A0A0A6YYD5 115 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 ANKRD20A5PA0PJZ0 165 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 OR6C76A6NM76 312 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 SULT1C2O00338 296 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 PRAF2O60831 178 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 ARL6IP5O75915 188 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 ABLIM3O94929 683 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 GTF2F2P13984 249 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 SYN1P17600 705 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 PVALBP20472 110 aaPredicted RBP12.3□□□□□ -0.44
ACTN1-204ENST00000438964 DPP4P27487 766 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 CCR2P41597 374 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 ZNF157P51786 506 aaPredicted RBP12.3□□□□□ -0.44
ACTN1-204ENST00000438964 CSNK1G2P78368 415 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 BDH1Q02338 343 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 NDUFAF6Q330K2 333 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 FOXN4Q96NZ1 517 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 NMNAT3Q96T66 252 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 TRPV4Q9HBA0 871 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 ZNF337Q9Y3M9 751 aa12.3□□□□□ -0.44
ACTN1-204ENST00000438964 SLC25A12O75746 678 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 NDUFB6O95139 128 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 ZFPL1O95159 310 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 CD3DP04234 171 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 ASGR2P07307 311 aa12.29□□□□□ -0.44
ACTN1-204ENST00000438964 AK4P27144 223 aaPredicted RBP12.29□□□□□ -0.44
ACTN1-204ENST00000438964 FGL1Q08830 312 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms