RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 USP51Q70EK9 711 aa20.72■□□□□ 0.91
CPSF4-204ENST00000436336 SLC25A36Q96CQ1 311 aa20.72■□□□□ 0.91
CPSF4-204ENST00000436336 DNAJA3Q96EY1 480 aa20.72■□□□□ 0.91
CPSF4-204ENST00000436336 ZNF570Q96NI8 536 aa20.72■□□□□ 0.91
CPSF4-204ENST00000436336 TNFRSF13CQ96RJ3 184 aa20.72■□□□□ 0.91
CPSF4-204ENST00000436336 ARHGAP9Q9BRR9 750 aa20.72■□□□□ 0.91
CPSF4-204ENST00000436336 TAPBPLQ9BX59 468 aa20.72■□□□□ 0.91
CPSF4-204ENST00000436336 ADNPQ9H2P0 1102 aa20.72■□□□□ 0.91
CPSF4-204ENST00000436336 ZDHHC11Q9H8X9 412 aa20.72■□□□□ 0.91
CPSF4-204ENST00000436336 TUBD1Q9UJT1 453 aa20.72■□□□□ 0.91
CPSF4-204ENST00000436336 GMPPBQ9Y5P6 360 aa20.72■□□□□ 0.91
CPSF4-204ENST00000436336 HIST1H2ABP04908 130 aa20.71■□□□□ 0.91
CPSF4-204ENST00000436336 IMPDH2P12268 514 aa20.71■□□□□ 0.91
CPSF4-204ENST00000436336 SHC1P29353 583 aa20.71■□□□□ 0.91
CPSF4-204ENST00000436336 RPS6KA3P51812 740 aa20.71■□□□□ 0.91
CPSF4-204ENST00000436336 FXYD6P3P58550 94 aa20.71■□□□□ 0.91
CPSF4-204ENST00000436336 IL18R1Q13478 541 aa20.71■□□□□ 0.91
CPSF4-204ENST00000436336 MED21Q13503 144 aa20.71■□□□□ 0.91
CPSF4-204ENST00000436336 RNFT1Q5M7Z0 435 aa20.71■□□□□ 0.91
CPSF4-204ENST00000436336 SLC6A19Q695T7 634 aa20.71■□□□□ 0.91
CPSF4-204ENST00000436336 RPUSD3Q6P087 351 aaKnown RBP20.71■□□□□ 0.91
CPSF4-204ENST00000436336 ASB18Q6ZVZ8 466 aa20.71■□□□□ 0.91
CPSF4-204ENST00000436336 HIST3H2AQ7L7L0 130 aa20.71■□□□□ 0.91
CPSF4-204ENST00000436336 CHERPQ8IWX8 916 aaKnown RBP20.71■□□□□ 0.91
CPSF4-204ENST00000436336 SLC43A2Q8N370 569 aa20.71■□□□□ 0.91
CPSF4-204ENST00000436336 OR8D4Q8NGM9 314 aa20.71■□□□□ 0.91
CPSF4-204ENST00000436336 HIST1H2ACQ93077 130 aa20.71■□□□□ 0.91
CPSF4-204ENST00000436336 OR5B2Q96R09 309 aa20.71■□□□□ 0.91
CPSF4-204ENST00000436336 MCCC2Q9HCC0 563 aa20.71■□□□□ 0.91
CPSF4-204ENST00000436336 TBC1D23Q9NUY8 699 aa20.71■□□□□ 0.91
CPSF4-204ENST00000436336 HIF3AQ9Y2N7 669 aa20.71■□□□□ 0.91
CPSF4-204ENST00000436336 MGAQ8IWI9 3026 aa20.71■□□□□ 0.91
CPSF4-204ENST00000436336 FZD7O75084 574 aa20.7■□□□□ 0.9
CPSF4-204ENST00000436336 CLIC3O95833 236 aa20.7■□□□□ 0.9
CPSF4-204ENST00000436336 ZNF24P17028 368 aa20.7■□□□□ 0.9
CPSF4-204ENST00000436336 CDK5Q00535 292 aa20.7■□□□□ 0.9
CPSF4-204ENST00000436336 OR52L1Q8NGH7 329 aa20.7■□□□□ 0.9
CPSF4-204ENST00000436336 SAMD8Q96LT4 415 aa20.7■□□□□ 0.9
CPSF4-204ENST00000436336 MFRPQ9BY79 579 aa20.7■□□□□ 0.9
CPSF4-204ENST00000436336 SLC25A19Q9HC21 320 aa20.7■□□□□ 0.9
CPSF4-204ENST00000436336 TRAPPC4Q9Y296 219 aa20.7■□□□□ 0.9
CPSF4-204ENST00000436336 LRCH1Q9Y2L9 728 aa20.7■□□□□ 0.9
CPSF4-204ENST00000436336 CORINQ9Y5Q5 1042 aa20.7■□□□□ 0.9
CPSF4-204ENST00000436336 LIPT2A6NK58 231 aa20.7■□□□□ 0.9
CPSF4-204ENST00000436336 TFECO14948 347 aaPredicted RBP20.7■□□□□ 0.9
CPSF4-204ENST00000436336 NDUFB2O95178 105 aa20.7■□□□□ 0.9
CPSF4-204ENST00000436336 OPN1LWP04000 364 aa20.7■□□□□ 0.9
CPSF4-204ENST00000436336 GNAO1P09471 354 aa20.7■□□□□ 0.9
CPSF4-204ENST00000436336 TSPAN19P0C672 248 aa20.7■□□□□ 0.9
CPSF4-204ENST00000436336 MYF6P23409 242 aa20.7■□□□□ 0.9
CPSF4-204ENST00000436336 GTF2E2P29084 291 aaKnown RBP20.7■□□□□ 0.9
CPSF4-204ENST00000436336 GRPRP30550 384 aa20.7■□□□□ 0.9
CPSF4-204ENST00000436336 GGT2P36268 569 aa20.7■□□□□ 0.9
CPSF4-204ENST00000436336 GIPRP48546 466 aa20.7■□□□□ 0.9
CPSF4-204ENST00000436336 PRPS1P60891 318 aa20.7■□□□□ 0.9
CPSF4-204ENST00000436336 OR7A5Q15622 319 aa20.7■□□□□ 0.9
CPSF4-204ENST00000436336 INAQ16352 499 aa20.7■□□□□ 0.9
CPSF4-204ENST00000436336 CMPK2Q5EBM0 449 aa20.7■□□□□ 0.9
CPSF4-204ENST00000436336 ZNF691Q5VV52 312 aa20.7■□□□□ 0.9
CPSF4-204ENST00000436336 SLX4IPQ5VYV7 408 aa20.7■□□□□ 0.9
CPSF4-204ENST00000436336 SLC27A4Q6P1M0 643 aa20.7■□□□□ 0.9
CPSF4-204ENST00000436336 NANOGNBQ7Z5D8 188 aa20.7■□□□□ 0.9
CPSF4-204ENST00000436336 OR5J2Q8NH18 312 aa20.7■□□□□ 0.9
CPSF4-204ENST00000436336 C9orf43Q8TAL5 461 aaPredicted RBP20.7■□□□□ 0.9
CPSF4-204ENST00000436336 SMPDL3BQ92485 455 aa20.7■□□□□ 0.9
CPSF4-204ENST00000436336 RELTQ969Z4 430 aa20.7■□□□□ 0.9
CPSF4-204ENST00000436336 CNBD2Q96M20 576 aa20.7■□□□□ 0.9
CPSF4-204ENST00000436336 KLHL15Q96M94 604 aa20.7■□□□□ 0.9
CPSF4-204ENST00000436336 MUS81Q96NY9 551 aa20.7■□□□□ 0.9
CPSF4-204ENST00000436336 TSSK6Q9BXA6 273 aa20.7■□□□□ 0.9
CPSF4-204ENST00000436336 ASPNQ9BXN1 380 aa20.7■□□□□ 0.9
CPSF4-204ENST00000436336 SLC6A15Q9H2J7 730 aa20.7■□□□□ 0.9
CPSF4-204ENST00000436336 SLC6A5Q9Y345 797 aa20.7■□□□□ 0.9
CPSF4-204ENST00000436336 CHD8Q9HCK8 2581 aa20.69■□□□□ 0.9
CPSF4-204ENST00000436336 A0A1W2PNR3 127 aa20.69■□□□□ 0.9
CPSF4-204ENST00000436336 SMSP52788 366 aa20.69■□□□□ 0.9
CPSF4-204ENST00000436336 GINS1Q14691 196 aa20.69■□□□□ 0.9
CPSF4-204ENST00000436336 SGCBQ16585 318 aa20.69■□□□□ 0.9
CPSF4-204ENST00000436336 TMEM236Q5W0B7 351 aa20.69■□□□□ 0.9
CPSF4-204ENST00000436336 TMPPEQ6ZT21 453 aa20.69■□□□□ 0.9
CPSF4-204ENST00000436336 SCAIQ8N9R8 606 aa20.69■□□□□ 0.9
CPSF4-204ENST00000436336 SETD9Q8NE22 299 aa20.69■□□□□ 0.9
CPSF4-204ENST00000436336 MIB2Q96AX9 1013 aa20.69■□□□□ 0.9
CPSF4-204ENST00000436336 APOL4Q9BPW4 351 aa20.69■□□□□ 0.9
CPSF4-204ENST00000436336 PRORYQ9H606 182 aa20.69■□□□□ 0.9
CPSF4-204ENST00000436336 ALKBH4Q9NXW9 302 aa20.69■□□□□ 0.9
CPSF4-204ENST00000436336 MRPL39Q9NYK5 338 aaKnown RBP20.69■□□□□ 0.9
CPSF4-204ENST00000436336 BLOC1S5-TXNDC5H3BN57 136 aa20.68■□□□□ 0.9
CPSF4-204ENST00000436336 PMS2P2O95744 297 aa20.68■□□□□ 0.9
CPSF4-204ENST00000436336 FAM87AP0C7U9 286 aa20.68■□□□□ 0.9
CPSF4-204ENST00000436336 POU3F2P20265 443 aaPredicted RBP20.68■□□□□ 0.9
CPSF4-204ENST00000436336 SLC6A6P31641 620 aa20.68■□□□□ 0.9
CPSF4-204ENST00000436336 UQCRC1P31930 480 aa20.68■□□□□ 0.9
CPSF4-204ENST00000436336 TPD52P55327 224 aaPredicted RBP20.68■□□□□ 0.9
CPSF4-204ENST00000436336 THSD4Q6ZMP0 1018 aa20.68■□□□□ 0.9
CPSF4-204ENST00000436336 C8orf59Q8N0T1 100 aaPredicted RBP20.68■□□□□ 0.9
CPSF4-204ENST00000436336 MARVELD2Q8N4S9 558 aa20.68■□□□□ 0.9
CPSF4-204ENST00000436336 OR2T33Q8NG76 320 aa20.68■□□□□ 0.9
CPSF4-204ENST00000436336 CRELD1Q96HD1 420 aa20.68■□□□□ 0.9
CPSF4-204ENST00000436336 DEFB127Q9H1M4 99 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms