RNA–Protein interactions for RNA: ENST00000435354.1

LINC01006-204, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 2 BASIC

Gene LINC01006, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-204ENST00000435354 BARX1Q9HBU1 254 aaPredicted RBP12.59□□□□□ -0.39
LINC01006-204ENST00000435354 SLC17A5Q9NRA2 495 aa12.59□□□□□ -0.39
LINC01006-204ENST00000435354 CALML5Q9NZT1 146 aa12.59□□□□□ -0.39
LINC01006-204ENST00000435354 UPB1Q9UBR1 384 aa12.59□□□□□ -0.39
LINC01006-204ENST00000435354 ARFGEF3Q5TH69 2177 aa12.59□□□□□ -0.39
LINC01006-204ENST00000435354 ATRQ13535 2644 aa12.58□□□□□ -0.39
LINC01006-204ENST00000435354 RTTNQ86VV8 2226 aa12.58□□□□□ -0.39
LINC01006-204ENST00000435354 UBDO15205 165 aa12.58□□□□□ -0.4
LINC01006-204ENST00000435354 FRS3O43559 492 aa12.58□□□□□ -0.4
LINC01006-204ENST00000435354 SSX4O60224 188 aa12.58□□□□□ -0.4
LINC01006-204ENST00000435354 CRLF1O75462 422 aa12.58□□□□□ -0.4
LINC01006-204ENST00000435354 ANP32DO95626 131 aa12.58□□□□□ -0.4
LINC01006-204ENST00000435354 GPIP06744 558 aa12.58□□□□□ -0.4
LINC01006-204ENST00000435354 NUDT7P0C024 238 aa12.58□□□□□ -0.4
LINC01006-204ENST00000435354 HOXB9P17482 250 aaPredicted RBP12.58□□□□□ -0.4
LINC01006-204ENST00000435354 CXCR1P25024 350 aa12.58□□□□□ -0.4
LINC01006-204ENST00000435354 WBP2NLQ6ICG8 309 aa12.58□□□□□ -0.4
LINC01006-204ENST00000435354 SERPINA11Q86U17 422 aa12.58□□□□□ -0.4
LINC01006-204ENST00000435354 C17orf78Q8N4C9 275 aa12.58□□□□□ -0.4
LINC01006-204ENST00000435354 GTF2H4Q92759 462 aa12.58□□□□□ -0.4
LINC01006-204ENST00000435354 SF3B5Q9BWJ5 86 aaKnown RBP12.58□□□□□ -0.4
LINC01006-204ENST00000435354 RMND5AQ9H871 391 aa12.58□□□□□ -0.4
LINC01006-204ENST00000435354 TMBIM4Q9HC24 238 aa12.58□□□□□ -0.4
LINC01006-204ENST00000435354 CBLN4Q9NTU7 201 aa12.58□□□□□ -0.4
LINC01006-204ENST00000435354 NKIRAS1Q9NYS0 192 aa12.58□□□□□ -0.4
LINC01006-204ENST00000435354 POU2F3Q9UKI9 436 aa12.58□□□□□ -0.4
LINC01006-204ENST00000435354 PRDM4Q9UKN5 801 aa12.58□□□□□ -0.4
LINC01006-204ENST00000435354 YLPM1P49750 1951 aaKnown RBP12.58□□□□□ -0.4
LINC01006-204ENST00000435354 IGHV4-30-2A0A087WSY4 118 aa12.57□□□□□ -0.4
LINC01006-204ENST00000435354 A0A096LNT2 108 aa12.57□□□□□ -0.4
LINC01006-204ENST00000435354 A0A0G2JPF8 293 aa12.57□□□□□ -0.4
LINC01006-204ENST00000435354 A8MVM7 634 aa12.57□□□□□ -0.4
LINC01006-204ENST00000435354 TMEM229AB2RXF0 380 aa12.57□□□□□ -0.4
LINC01006-204ENST00000435354 HNRNPCL2B2RXH8 293 aa12.57□□□□□ -0.4
LINC01006-204ENST00000435354 HNRNPCL3B7ZW38 293 aa12.57□□□□□ -0.4
LINC01006-204ENST00000435354 KLF11O14901 512 aa12.57□□□□□ -0.4
LINC01006-204ENST00000435354 HNRNPCL1O60812 293 aaKnown RBP12.57□□□□□ -0.4
LINC01006-204ENST00000435354 NPIPB7O75200 414 aa12.57□□□□□ -0.4
LINC01006-204ENST00000435354 HNRNPCL4P0DMR1 293 aa12.57□□□□□ -0.4
LINC01006-204ENST00000435354 MPGP29372 298 aa12.57□□□□□ -0.4
LINC01006-204ENST00000435354 LGALS3BPQ08380 585 aa12.57□□□□□ -0.4
LINC01006-204ENST00000435354 LARS2Q15031 903 aaKnown RBP12.57□□□□□ -0.4
LINC01006-204ENST00000435354 NRF1Q16656 503 aa12.57□□□□□ -0.4
LINC01006-204ENST00000435354 C6orf10Q5SRN2 563 aa12.57□□□□□ -0.4
LINC01006-204ENST00000435354 C1orf140Q5VVS0 124 aa12.57□□□□□ -0.4
LINC01006-204ENST00000435354 SLC2A7Q6PXP3 512 aa12.57□□□□□ -0.4
LINC01006-204ENST00000435354 AAED1Q7RTV5 226 aa12.57□□□□□ -0.4
LINC01006-204ENST00000435354 GPAT4Q86UL3 456 aa12.57□□□□□ -0.4
LINC01006-204ENST00000435354 MIER2Q8N344 545 aa12.57□□□□□ -0.4
LINC01006-204ENST00000435354 MUC15Q8N387 334 aa12.57□□□□□ -0.4
LINC01006-204ENST00000435354 HTRA1Q92743 480 aa12.57□□□□□ -0.4
LINC01006-204ENST00000435354 MAL2Q969L2 176 aa12.57□□□□□ -0.4
LINC01006-204ENST00000435354 C3orf49Q96BT1 292 aa12.57□□□□□ -0.4
LINC01006-204ENST00000435354 SPATA9Q9BWV2 254 aa12.57□□□□□ -0.4
LINC01006-204ENST00000435354 RSPO3Q9BXY4 272 aaPredicted RBP12.57□□□□□ -0.4
LINC01006-204ENST00000435354 PAIP1Q9H074 479 aaKnown RBP12.57□□□□□ -0.4
LINC01006-204ENST00000435354 ADPRHL2Q9NX46 363 aa12.57□□□□□ -0.4
LINC01006-204ENST00000435354 AMDHD2Q9Y303 409 aa12.57□□□□□ -0.4
LINC01006-204ENST00000435354 PCDHB14Q9Y5E9 798 aa12.57□□□□□ -0.4
LINC01006-204ENST00000435354 COL6A5A8TX70 2615 aa12.56□□□□□ -0.4
LINC01006-204ENST00000435354 FAM234BA2RU67 622 aa12.56□□□□□ -0.4
LINC01006-204ENST00000435354 ATP6V1G2-DDX39BF2Z307 99 aa12.56□□□□□ -0.4
LINC01006-204ENST00000435354 BMP2P12643 396 aa12.56□□□□□ -0.4
LINC01006-204ENST00000435354 FABP6P51161 128 aa12.56□□□□□ -0.4
LINC01006-204ENST00000435354 COPZ1P61923 177 aa12.56□□□□□ -0.4
LINC01006-204ENST00000435354 HOXC5Q00444 222 aa12.56□□□□□ -0.4
LINC01006-204ENST00000435354 TGFBR3Q03167 851 aa12.56□□□□□ -0.4
LINC01006-204ENST00000435354 RGNQ15493 299 aa12.56□□□□□ -0.4
LINC01006-204ENST00000435354 HIKESHIQ53FT3 197 aa12.56□□□□□ -0.4
LINC01006-204ENST00000435354 EPGNQ6UW88 154 aa12.56□□□□□ -0.4
LINC01006-204ENST00000435354 FBXL14Q8N1E6 418 aa12.56□□□□□ -0.4
LINC01006-204ENST00000435354 POMGNT2Q8NAT1 580 aa12.56□□□□□ -0.4
LINC01006-204ENST00000435354 OR10H5Q8NGA6 315 aa12.56□□□□□ -0.4
LINC01006-204ENST00000435354 BOD1Q96IK1 185 aa12.56□□□□□ -0.4
LINC01006-204ENST00000435354 ADAD1Q96M93 576 aaKnown RBP12.56□□□□□ -0.4
LINC01006-204ENST00000435354 PIF1Q9H611 641 aa12.56□□□□□ -0.4
LINC01006-204ENST00000435354 BCL2L10Q9HD36 194 aa12.56□□□□□ -0.4
LINC01006-204ENST00000435354 A4GALTQ9NPC4 353 aa12.56□□□□□ -0.4
LINC01006-204ENST00000435354 THUMPD1Q9NXG2 353 aaKnown RBP12.56□□□□□ -0.4
LINC01006-204ENST00000435354 ZNF232Q9UNY5 417 aa12.56□□□□□ -0.4
LINC01006-204ENST00000435354 USH1CQ9Y6N9 552 aa12.56□□□□□ -0.4
LINC01006-204ENST00000435354 FTCDNL1E5RQL4 147 aa12.55□□□□□ -0.4
LINC01006-204ENST00000435354 H7C417 338 aa12.55□□□□□ -0.4
LINC01006-204ENST00000435354 CD5LO43866 347 aa12.55□□□□□ -0.4
LINC01006-204ENST00000435354 CDH2P19022 906 aaPredicted RBP12.55□□□□□ -0.4
LINC01006-204ENST00000435354 NCF2P19878 526 aaPredicted RBP12.55□□□□□ -0.4
LINC01006-204ENST00000435354 SELENOPP49908 381 aa12.55□□□□□ -0.4
LINC01006-204ENST00000435354 NUDT6P53370 316 aa12.55□□□□□ -0.4
LINC01006-204ENST00000435354 PRPS1P60891 318 aa12.55□□□□□ -0.4
LINC01006-204ENST00000435354 EGR4Q05215 589 aa12.55□□□□□ -0.4
LINC01006-204ENST00000435354 ZSWIM7Q19AV6 140 aa12.55□□□□□ -0.4
LINC01006-204ENST00000435354 ZNF311Q5JNZ3 666 aa12.55□□□□□ -0.4
LINC01006-204ENST00000435354 BEND6Q5SZJ8 279 aaPredicted RBP12.55□□□□□ -0.4
LINC01006-204ENST00000435354 C1QTNF12Q5T7M4 302 aa12.55□□□□□ -0.4
LINC01006-204ENST00000435354 PRAMEF8Q5VWM4 474 aa12.55□□□□□ -0.4
LINC01006-204ENST00000435354 PRAMEF7Q5VXH5 474 aa12.55□□□□□ -0.4
LINC01006-204ENST00000435354 TMEM225Q6GV28 225 aa12.55□□□□□ -0.4
LINC01006-204ENST00000435354 ZNF544Q6NX49 715 aa12.55□□□□□ -0.4
LINC01006-204ENST00000435354 CREB3L2Q70SY1 520 aa12.55□□□□□ -0.4
LINC01006-204ENST00000435354 LINGO2Q7L985 606 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms