RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 PFKFB2O60825 505 aa4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 ZMPSTE24O75844 475 aa4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 OR7A10O76100 309 aa4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 LDOC1O95751 146 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 OXTP01178 125 aa4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 LINC00271P0C7V0 271 aa4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 UBTFL1P0CB47 393 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 SMIM10L1P0DMW3 83 aa4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 ZNF7P17097 686 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 EFNA1P20827 205 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 ATP5A1P25705 553 aaKnown RBP4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 IVDP26440 423 aa4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 IFNA8P32881 189 aa4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 HMGCLP35914 325 aa4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 RIPK4P57078 832 aa4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 RPS14P62263 151 aaKnown RBP4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 IFFO1Q0D2I5 559 aa4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 ACTBL2Q562R1 376 aa4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 Q6YL49 198 aa4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 SLC25A48Q6ZT89 311 aaKnown RBP4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 FCRLAQ7L513 359 aa4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 ZNF677Q86XU0 584 aa4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 CRLF3Q8IUI8 442 aa4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 DCP1BQ8IZD4 617 aaKnown RBP4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 MCOLN2Q8IZK6 566 aa4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 GVQW1Q8N7I0 195 aa4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 ZSCAN4Q8NAM6 433 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 NOXO1Q8NFA2 376 aa4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 OR1S2Q8NGQ3 325 aa4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 SETD7Q8WTS6 366 aaKnown RBP4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 DNAJB3Q8WWF6 145 aa4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 SMARCD2Q92925 531 aa4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 FAF2Q96CS3 445 aa4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 SMIM10Q96HG1 83 aa4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 EPYCQ99645 322 aa4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 FOLH1BQ9HBA9 442 aa4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 ACP6Q9NPH0 428 aa4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 MRPL40Q9NQ50 206 aaKnown RBP4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 RMND1Q9NWS8 449 aa4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 C19orf25Q9UFG5 118 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 ELF5Q9UKW6 265 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 MRPS28Q9Y2Q9 187 aaKnown RBP4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 KCNIP3Q9Y2W7 256 aa4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 TBL2Q9Y4P3 447 aaKnown RBP4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 FADS3Q9Y5Q0 445 aa4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 CDH10Q9Y6N8 788 aa4.55□□□□□ -1.68
HMGB3P10-201ENST00000434734 CFAP65Q6ZU64 1925 aaKnown RBP4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 TCRBV9S1A1TA0A576 114 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 TMEM213A2RRL7 107 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 K7ERI5 159 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 FCN1O00602 326 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 NDUFAB1O14561 156 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 HSD17B6O14756 317 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 TNFSF11O14788 317 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 SYNGR3O43761 229 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 RPP14O95059 124 aaKnown RBP4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 BAG4O95429 457 aaKnown RBP4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 ATP1A1P05023 1023 aaKnown RBP4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 CTXN2P0C2S0 81 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 PRSS56P0CW18 603 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 CALCRP30988 508 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 SAA4P35542 130 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 RPL14P50914 215 aaKnown RBP4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 ARPC4P59998 168 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 RPS6P62753 249 aaKnown RBP4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 PITPNAQ00169 270 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 ID2Q02363 134 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 POU3F1Q03052 451 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 GLO1Q04760 184 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 ZNF33BQ06732 778 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 SCRN3Q0VDG4 424 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 BNIP2Q12982 314 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 SRSF9Q13242 221 aaKnown RBP eCLIP4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 RAB35Q15286 201 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 GOLGA7BQ2TAP0 167 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 PRTGQ2VWP7 1150 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 FAM106AQ4KMX7 169 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 UNC50Q53HI1 259 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 ASPRV1Q53RT3 343 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 PAN3Q58A45 887 aaKnown RBP4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 FFAR4Q5NUL3 377 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 ATP1A1-AS1Q5TC04 95 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 HHATQ5VTY9 493 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 TMEM207Q6UWW9 146 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 ABHD13Q7L211 337 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 NUFIP2Q7Z417 695 aaKnown RBP4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 GGNQ86UU5 652 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 UNC93AQ86WB7 457 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 SFR1Q86XK3 245 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 APOBEC3FQ8IUX4 373 aaKnown RBP4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 OR4N5Q8IXE1 308 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 TMEM156Q8N614 296 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 SLC16A11Q8NCK7 471 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 MDS2Q8NDY4 140 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 OR5B3Q8NH48 314 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 FBXO25Q8TCJ0 367 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 AENQ8WTP8 325 aaKnown RBP4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 OTUB2Q96DC9 234 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms