RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 PLA1AQ53H76 456 aa9.54□□□□□ -0.88
CD44-210ENST00000434472 EMC4Q5J8M3 183 aa9.54□□□□□ -0.88
CD44-210ENST00000434472 FAM27D1Q5T7N8 215 aa9.54□□□□□ -0.88
CD44-210ENST00000434472 RPTNQ6XPR3 784 aa9.54□□□□□ -0.88
CD44-210ENST00000434472 MED25Q71SY5 747 aa9.54□□□□□ -0.88
CD44-210ENST00000434472 SYT13Q7L8C5 426 aa9.54□□□□□ -0.88
CD44-210ENST00000434472 SLC35F3Q8IY50 421 aa9.54□□□□□ -0.88
CD44-210ENST00000434472 YIPF7Q8N8F6 280 aa9.54□□□□□ -0.88
CD44-210ENST00000434472 OR4C3Q8NH37 302 aa9.54□□□□□ -0.88
CD44-210ENST00000434472 OR51Q1Q8NH59 317 aa9.54□□□□□ -0.88
CD44-210ENST00000434472 LILRB4Q8NHJ6 448 aa9.54□□□□□ -0.88
CD44-210ENST00000434472 HSPA12BQ96MM6 686 aa9.54□□□□□ -0.88
CD44-210ENST00000434472 SLC46A1Q96NT5 459 aa9.54□□□□□ -0.88
CD44-210ENST00000434472 FYTTD1Q96QD9 318 aaKnown RBP9.54□□□□□ -0.88
CD44-210ENST00000434472 MNTQ99583 582 aa9.54□□□□□ -0.88
CD44-210ENST00000434472 ABCG5Q9H222 651 aa9.54□□□□□ -0.88
CD44-210ENST00000434472 LRRN3Q9H3W5 708 aa9.54□□□□□ -0.88
CD44-210ENST00000434472 SOHLH2Q9NX45 425 aa9.54□□□□□ -0.88
CD44-210ENST00000434472 PAQR5Q9NXK6 330 aaPredicted RBP9.54□□□□□ -0.88
CD44-210ENST00000434472 MRPL39Q9NYK5 338 aaKnown RBP9.54□□□□□ -0.88
CD44-210ENST00000434472 GNG8Q9UK08 70 aa9.54□□□□□ -0.88
CD44-210ENST00000434472 SPATA2Q9UM82 520 aa9.54□□□□□ -0.88
CD44-210ENST00000434472 HIF3AQ9Y2N7 669 aa9.54□□□□□ -0.88
CD44-210ENST00000434472 CLDN16Q9Y5I7 305 aa9.54□□□□□ -0.88
CD44-210ENST00000434472 CHD7Q9P2D1 2997 aa9.54□□□□□ -0.88
CD44-210ENST00000434472 CHURC1-FNTBB4DL54 471 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 TMEM150CB9EJG8 249 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 SCDO00767 359 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 EEF1E1O43324 174 aaKnown RBP9.53□□□□□ -0.88
CD44-210ENST00000434472 CDC123O75794 336 aaPredicted RBP9.53□□□□□ -0.88
CD44-210ENST00000434472 TXNDC12O95881 172 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 NME1P15531 152 aaKnown RBP9.53□□□□□ -0.88
CD44-210ENST00000434472 MAOAP21397 527 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 RORAP35398 523 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 NAA10P41227 235 aaPredicted RBP9.53□□□□□ -0.88
CD44-210ENST00000434472 SLC6A8P48029 635 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 FNTBP49356 437 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 GZMKP49863 264 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 DCAF7P61962 342 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 ERVK-25P63136 954 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 FAPQ12884 760 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 EFR3AQ14156 821 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 ERV3-1Q14264 604 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 CCDC85BQ15834 202 aaPredicted RBP9.53□□□□□ -0.88
CD44-210ENST00000434472 NTRK2Q16620 822 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 SLC25A35Q3KQZ1 300 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 YIF1BQ5BJH7 314 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 FNDC7Q5VTL7 733 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 IL20RBQ6UXL0 311 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 ASB18Q6ZVZ8 466 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 ATG4DQ86TL0 474 aaPredicted RBP9.53□□□□□ -0.88
CD44-210ENST00000434472 CDH24Q86UP0 819 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 PIAS4Q8N2W9 510 aaPredicted RBP9.53□□□□□ -0.88
CD44-210ENST00000434472 SDR16C5Q8N3Y7 309 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 TOMM5Q8N4H5 51 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 LRRC17Q8N6Y2 441 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 ZFAND1Q8TCF1 268 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 RPS4Y2Q8TD47 263 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 LMX1AQ8TE12 382 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 ARSGQ96EG1 525 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 NMNAT3Q96T66 252 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 GAS2L1Q99501 681 aaPredicted RBP9.53□□□□□ -0.88
CD44-210ENST00000434472 GTPBP2Q9BX10 602 aaKnown RBP9.53□□□□□ -0.88
CD44-210ENST00000434472 RAB33BQ9H082 229 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 ZNF275Q9NSD4 429 aaPredicted RBP9.53□□□□□ -0.88
CD44-210ENST00000434472 RXFP3Q9NSD7 469 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 STMN3Q9NZ72 180 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 AKAP7Q9P0M2 348 aaPredicted RBP9.53□□□□□ -0.88
CD44-210ENST00000434472 GMEB2Q9UKD1 530 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 ARHGEF17Q96PE2 2063 aaPredicted RBP9.53□□□□□ -0.88
CD44-210ENST00000434472 IGKV1D-42A0A075B6H8 117 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 FRG2CA6NGY1 282 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 C17orf105B2RV13 164 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 ZNF264O43296 627 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 SCO2O43819 266 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 ITGA10O75578 1167 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 CLPSP04118 112 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 CD14P08571 375 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 POU3F3P20264 500 aaPredicted RBP9.53□□□□□ -0.88
CD44-210ENST00000434472 CD27P26842 260 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 CD1CP29017 333 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 PPM1FP49593 454 aaPredicted RBP9.53□□□□□ -0.88
CD44-210ENST00000434472 HCCSP53701 268 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 EPHA4P54764 986 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 RAG2P55895 527 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 TNK1Q13470 666 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 ZNF74Q16587 644 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 NDUFAF6Q330K2 333 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 CEP78Q5JTW2 689 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 UBE2NLQ5JXB2 153 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 LEG1Q6P5S2 330 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 SLC16A9Q7RTY1 509 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 FAM220AQ7Z4H9 259 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 GLCCI1Q86VQ1 547 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 C17orf82Q86X59 251 aaPredicted RBP9.53□□□□□ -0.88
CD44-210ENST00000434472 CARFQ8N187 725 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 C10orf53Q8N6V4 93 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 DNAJC5GQ8N7S2 189 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 FRMD1Q8N878 549 aa9.53□□□□□ -0.88
CD44-210ENST00000434472 TSTD1Q8NFU3 115 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms