RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 ZFYVE1Q9HBF4 777 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 MYNNQ9NPC7 610 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 SERGEFQ9UGK8 458 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 PCOLCE2Q9UKZ9 415 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 ICKQ9UPZ9 632 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 RCE1Q9Y256 329 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 PCDHGA1Q9Y5H4 931 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 TRIOO75962 3097 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 A0A1W2PR77 199 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 TSPAN11A1L157 253 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 RAB19A4D1S5 217 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 ANKRD61A6NGH8 418 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 GPR31O00270 319 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 SURF4O15260 269 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 SPDEFO95238 335 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 HEXAP06865 529 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 CTSLP07711 333 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 MGMTP16455 207 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 SPI1P17947 270 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 CNR1P21554 472 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 KCNJ3P48549 501 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 DUSP3P51452 185 aaPredicted RBP7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 ARHGDIBP52566 201 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 YPEL5P62699 121 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 MC1RQ01726 317 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 MAPK14Q16539 360 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 CDKN3Q16667 212 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 PRSS53Q2L4Q9 553 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 C10orf91Q5T1B1 145 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 AVPI1Q5T686 147 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 TMEM88Q6PEY1 159 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 LRRN1Q6UXK5 716 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 PRSS45Q7RTY3 260 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 THOC6Q86W42 341 aaKnown RBP7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 KLHDC8AQ8IYD2 350 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 RELL2Q8NC24 303 aaPredicted RBP7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 OR4D9Q8NGE8 314 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 OR14A16Q8NHC5 309 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 MRPL48Q96GC5 212 aaKnown RBP7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 CMSS1Q9BQ75 279 aaKnown RBP7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 ORAI3Q9BRQ5 295 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 DUSP23Q9BVJ7 150 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 FNDC11Q9BVV2 318 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 MFRPQ9BY79 579 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 SLC17A9Q9BYT1 436 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 PIGMQ9H3S5 423 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 NOX3Q9HBY0 568 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 MBD2Q9UBB5 411 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 LHX3Q9UBR4 397 aa7.1□□□□□ -1.27
CNKSR3-202ENST00000433165 FXYD6-FXYD2A0A087WZ82 144 aa7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 TRAV1-2A0A0B4J238 106 aa7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 TMEM218A2RU14 115 aa7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 GABARAPH6UMI1 98 aa7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 K7ERQ8 282 aa7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 SOCS5O75159 536 aa7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 NDUFS6O75380 124 aaKnown RBP7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 IGHV2-70P01814 119 aa7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 ATF1P18846 271 aa7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 BTF3P20290 206 aaKnown RBP7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 EPHA8P29322 1005 aaPredicted RBP7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 STAT5AP42229 794 aa7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 H2BFSP57053 126 aa7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 GMFBP60983 142 aa7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 RPS13P62277 151 aaKnown RBP7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 TNFRSF17Q02223 184 aa7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 FOXC1Q12948 553 aa7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 TSPAN31Q12999 210 aa7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 TMEM52BQ4KMG9 183 aa7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 FAM74A1Q5RGS3 127 aa7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 HENMT1Q5T8I9 393 aaKnown RBP7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 FAM83HQ6ZRV2 1179 aaPredicted RBP7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 CXXC5Q7LFL8 322 aaKnown RBP7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 COMTD1Q86VU5 262 aa7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 JAZF1Q86VZ6 243 aa7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 VRK3Q8IV63 474 aa7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 SERPINA12Q8IW75 414 aa7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 KRT78Q8N1N4 520 aa7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 CBARPQ8N350 705 aaPredicted RBP7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 ACBD7Q8N6N7 88 aa7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 SIRT6Q8N6T7 355 aa7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 CHST14Q8NCH0 376 aa7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 BAHD1Q8TBE0 780 aaPredicted RBP7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 C16orf78Q8WTQ4 265 aa7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 ASB13Q8WXK3 278 aa7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 PRRC1Q96M27 445 aa7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 MS4A4EQ96PG1 132 aa7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 OR1F2PQ96R84 312 aa7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 ZNF607Q96SK3 696 aa7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 ENKD1Q9H0I2 346 aa7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 FXYD6Q9H0Q3 95 aa7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 CXorf36Q9H7Y0 433 aa7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 TRIM36Q9NQ86 728 aa7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 PRDM9Q9NQV7 894 aa7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 ZDHHC3Q9NYG2 299 aa7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 NFKBIL1Q9UBC1 381 aaPredicted RBP7.09□□□□□ -1.27
CNKSR3-202ENST00000433165 IGLV3-16A0A075B6K0 115 aa7.09□□□□□ -1.28
CNKSR3-202ENST00000433165 ANKRD20A5PA0PJZ0 165 aa7.09□□□□□ -1.28
CNKSR3-202ENST00000433165 H0Y8X5 98 aa7.09□□□□□ -1.28
CNKSR3-202ENST00000433165 SCAMP1O15126 338 aa7.09□□□□□ -1.28
CNKSR3-202ENST00000433165 PLXNA2O75051 1894 aa7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms