RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 ABCB9Q9NP78 766 aa11.72□□□□□ -0.53
DDX56-204ENST00000431640 NRIP3Q9NQ35 241 aa11.72□□□□□ -0.53
DDX56-204ENST00000431640 ADAM30Q9UKF2 790 aa11.72□□□□□ -0.53
DDX56-204ENST00000431640 FABP12A6NFH5 140 aa11.71□□□□□ -0.53
DDX56-204ENST00000431640 DLGAP3O95886 979 aa11.71□□□□□ -0.53
DDX56-204ENST00000431640 CLEC2LP0C7M8 214 aa11.71□□□□□ -0.53
DDX56-204ENST00000431640 HIST1H1CP16403 213 aaKnown RBP11.71□□□□□ -0.53
DDX56-204ENST00000431640 CD97P48960 835 aa11.71□□□□□ -0.53
DDX56-204ENST00000431640 MTNR1BP49286 362 aa11.71□□□□□ -0.53
DDX56-204ENST00000431640 RPS4XP62701 263 aaKnown RBP11.71□□□□□ -0.53
DDX56-204ENST00000431640 ACTA2P62736 377 aa11.71□□□□□ -0.53
DDX56-204ENST00000431640 ACTG2P63267 376 aa11.71□□□□□ -0.53
DDX56-204ENST00000431640 CCL7P80098 99 aa11.71□□□□□ -0.53
DDX56-204ENST00000431640 GGTLC2Q14390 218 aa11.71□□□□□ -0.53
DDX56-204ENST00000431640 NDUFAF6Q330K2 333 aa11.71□□□□□ -0.53
DDX56-204ENST00000431640 VWA2Q5GFL6 755 aa11.71□□□□□ -0.53
DDX56-204ENST00000431640 FCRLBQ6BAA4 426 aa11.71□□□□□ -0.53
DDX56-204ENST00000431640 PAMR1Q6UXH9 720 aa11.71□□□□□ -0.53
DDX56-204ENST00000431640 B3GLCTQ6Y288 498 aa11.71□□□□□ -0.53
DDX56-204ENST00000431640 ZNF574Q6ZN55 896 aaPredicted RBP11.71□□□□□ -0.53
DDX56-204ENST00000431640 VASH1Q7L8A9 365 aaPredicted RBP11.71□□□□□ -0.53
DDX56-204ENST00000431640 TPRA1Q86W33 373 aa11.71□□□□□ -0.53
DDX56-204ENST00000431640 EGFL6Q8IUX8 553 aa11.71□□□□□ -0.53
DDX56-204ENST00000431640 SYS1Q8N2H4 156 aa11.71□□□□□ -0.53
DDX56-204ENST00000431640 MS4A15Q8N5U1 240 aa11.71□□□□□ -0.53
DDX56-204ENST00000431640 ZNF321PQ8N8H1 164 aa11.71□□□□□ -0.53
DDX56-204ENST00000431640 CYB561A3Q8NBI2 242 aa11.71□□□□□ -0.53
DDX56-204ENST00000431640 OR4K13Q8NH42 304 aa11.71□□□□□ -0.53
DDX56-204ENST00000431640 ZNF563Q8TA94 476 aa11.71□□□□□ -0.53
DDX56-204ENST00000431640 DIRAS2Q96HU8 199 aa11.71□□□□□ -0.53
DDX56-204ENST00000431640 ADOQ96SZ5 270 aa11.71□□□□□ -0.53
DDX56-204ENST00000431640 SDHCQ99643 169 aaPredicted RBP11.71□□□□□ -0.53
DDX56-204ENST00000431640 SLC7A5P2Q9GIP4 190 aa11.71□□□□□ -0.53
DDX56-204ENST00000431640 ADAM19Q9H013 955 aa11.71□□□□□ -0.53
DDX56-204ENST00000431640 POLE4Q9NR33 117 aa11.71□□□□□ -0.53
DDX56-204ENST00000431640 V9GYH0 126 aa11.71□□□□□ -0.53
DDX56-204ENST00000431640 WDFY3Q8IZQ1 3526 aa11.71□□□□□ -0.53
DDX56-204ENST00000431640 EP300Q09472 2414 aaPredicted RBP11.71□□□□□ -0.54
DDX56-204ENST00000431640 NUP210LQ5VU65 1888 aa11.71□□□□□ -0.54
DDX56-204ENST00000431640 ZC3H12DA2A288 527 aaKnown RBP11.71□□□□□ -0.54
DDX56-204ENST00000431640 MCIDASD6RGH6 385 aa11.71□□□□□ -0.54
DDX56-204ENST00000431640 GNB5O14775 395 aa11.71□□□□□ -0.54
DDX56-204ENST00000431640 TSPAN2O60636 221 aa11.71□□□□□ -0.54
DDX56-204ENST00000431640 SERPINA3P01011 423 aa11.71□□□□□ -0.54
DDX56-204ENST00000431640 ANKRD34CP0C6C1 535 aa11.71□□□□□ -0.54
DDX56-204ENST00000431640 DIO1P49895 249 aa11.71□□□□□ -0.54
DDX56-204ENST00000431640 ZNF85Q03923 595 aa11.71□□□□□ -0.54
DDX56-204ENST00000431640 HSF2Q03933 536 aa11.71□□□□□ -0.54
DDX56-204ENST00000431640 SCN1BQ07699 218 aa11.71□□□□□ -0.54
DDX56-204ENST00000431640 EBPQ15125 230 aaKnown RBP11.71□□□□□ -0.54
DDX56-204ENST00000431640 CD226Q15762 336 aa11.71□□□□□ -0.54
DDX56-204ENST00000431640 ZNF74Q16587 644 aa11.71□□□□□ -0.54
DDX56-204ENST00000431640 EMC4Q5J8M3 183 aa11.71□□□□□ -0.54
DDX56-204ENST00000431640 RHBDD2Q6NTF9 364 aa11.71□□□□□ -0.54
DDX56-204ENST00000431640 FAM131AQ6UXB0 335 aa11.71□□□□□ -0.54
DDX56-204ENST00000431640 LAX1Q8IWV1 398 aa11.71□□□□□ -0.54
DDX56-204ENST00000431640 LRRC17Q8N6Y2 441 aa11.71□□□□□ -0.54
DDX56-204ENST00000431640 RHBDD1Q8TEB9 315 aa11.71□□□□□ -0.54
DDX56-204ENST00000431640 ARSGQ96EG1 525 aa11.71□□□□□ -0.54
DDX56-204ENST00000431640 GAL3ST4Q96RP7 486 aa11.71□□□□□ -0.54
DDX56-204ENST00000431640 CNN2Q99439 309 aaKnown RBP11.71□□□□□ -0.54
DDX56-204ENST00000431640 TBX5Q99593 518 aa11.71□□□□□ -0.54
DDX56-204ENST00000431640 TIMP4Q99727 224 aa11.71□□□□□ -0.54
DDX56-204ENST00000431640 NANSQ9NR45 359 aa11.71□□□□□ -0.54
DDX56-204ENST00000431640 MKL2Q9ULH7 1088 aa11.71□□□□□ -0.54
DDX56-204ENST00000431640 HIF3AQ9Y2N7 669 aa11.71□□□□□ -0.54
DDX56-204ENST00000431640 ZFHX2Q9C0A1 2572 aaPredicted RBP11.7□□□□□ -0.54
DDX56-204ENST00000431640 IGKV1D-42A0A075B6H8 117 aa11.7□□□□□ -0.54
DDX56-204ENST00000431640 ALG1L2C9J202 215 aa11.7□□□□□ -0.54
DDX56-204ENST00000431640 J3QLW9 94 aa11.7□□□□□ -0.54
DDX56-204ENST00000431640 SLC19A2O60779 497 aa11.7□□□□□ -0.54
DDX56-204ENST00000431640 HIST1H2ABP04908 130 aa11.7□□□□□ -0.54
DDX56-204ENST00000431640 CD1AP06126 327 aa11.7□□□□□ -0.54
DDX56-204ENST00000431640 ZNF19P17023 458 aa11.7□□□□□ -0.54
DDX56-204ENST00000431640 PGCP20142 388 aa11.7□□□□□ -0.54
DDX56-204ENST00000431640 ACP1P24666 158 aa11.7□□□□□ -0.54
DDX56-204ENST00000431640 CCR4P51679 360 aa11.7□□□□□ -0.54
DDX56-204ENST00000431640 NR0B1P51843 470 aaKnown RBP11.7□□□□□ -0.54
DDX56-204ENST00000431640 GBX2P52951 348 aaPredicted RBP11.7□□□□□ -0.54
DDX56-204ENST00000431640 CLDN6P56747 220 aa11.7□□□□□ -0.54
DDX56-204ENST00000431640 NRG3P56975 720 aa11.7□□□□□ -0.54
DDX56-204ENST00000431640 DAB2P98082 770 aa11.7□□□□□ -0.54
DDX56-204ENST00000431640 GLYR1Q49A26 553 aaPredicted RBP11.7□□□□□ -0.54
DDX56-204ENST00000431640 FAAH2Q6GMR7 532 aa11.7□□□□□ -0.54
DDX56-204ENST00000431640 TMEM91Q6ZNR0 172 aa11.7□□□□□ -0.54
DDX56-204ENST00000431640 HIST3H2AQ7L7L0 130 aa11.7□□□□□ -0.54
DDX56-204ENST00000431640 PIP4P1Q86T03 277 aa11.7□□□□□ -0.54
DDX56-204ENST00000431640 CADM3Q8N126 398 aa11.7□□□□□ -0.54
DDX56-204ENST00000431640 C10orf53Q8N6V4 93 aa11.7□□□□□ -0.54
DDX56-204ENST00000431640 TEX19Q8NA77 164 aa11.7□□□□□ -0.54
DDX56-204ENST00000431640 GATSQ8NAP1 163 aa11.7□□□□□ -0.54
DDX56-204ENST00000431640 NPEPL1Q8NDH3 523 aa11.7□□□□□ -0.54
DDX56-204ENST00000431640 SDR9C7Q8NEX9 313 aa11.7□□□□□ -0.54
DDX56-204ENST00000431640 HIST1H2ACQ93077 130 aa11.7□□□□□ -0.54
DDX56-204ENST00000431640 TP53INP1Q96A56 240 aa11.7□□□□□ -0.54
DDX56-204ENST00000431640 KCTD12Q96CX2 325 aaKnown RBP11.7□□□□□ -0.54
DDX56-204ENST00000431640 LMF1Q96S06 567 aa11.7□□□□□ -0.54
DDX56-204ENST00000431640 DDOQ99489 341 aa11.7□□□□□ -0.54
DDX56-204ENST00000431640 VN1R1Q9GZP7 353 aa11.7□□□□□ -0.54
DDX56-204ENST00000431640 SRRQ9GZT4 340 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms