RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 SLC35F2Q8IXU6 374 aa12.72□□□□□ -0.37
HOXC4-202ENST00000430889 GPR135Q8IZ08 494 aa12.72□□□□□ -0.37
HOXC4-202ENST00000430889 Q8N9G6 341 aaPredicted RBP12.72□□□□□ -0.37
HOXC4-202ENST00000430889 ZBTB8BQ8NAP8 495 aaPredicted RBP12.72□□□□□ -0.37
HOXC4-202ENST00000430889 OR1N1Q8NGS0 311 aa12.72□□□□□ -0.37
HOXC4-202ENST00000430889 ABHD4Q8TB40 342 aa12.72□□□□□ -0.37
HOXC4-202ENST00000430889 ACOT12Q8WYK0 555 aa12.72□□□□□ -0.37
HOXC4-202ENST00000430889 HPS1Q92902 700 aa12.72□□□□□ -0.37
HOXC4-202ENST00000430889 RASD2Q96D21 266 aa12.72□□□□□ -0.37
HOXC4-202ENST00000430889 CLIP3Q96DZ5 547 aa12.72□□□□□ -0.37
HOXC4-202ENST00000430889 PELI1Q96FA3 418 aa12.72□□□□□ -0.37
HOXC4-202ENST00000430889 ADOQ96SZ5 270 aa12.72□□□□□ -0.37
HOXC4-202ENST00000430889 NMNAT3Q96T66 252 aa12.72□□□□□ -0.37
HOXC4-202ENST00000430889 YIPF2Q9BWQ6 316 aa12.72□□□□□ -0.37
HOXC4-202ENST00000430889 WWTR1Q9GZV5 400 aa12.72□□□□□ -0.37
HOXC4-202ENST00000430889 SACM1LQ9NTJ5 587 aa12.72□□□□□ -0.37
HOXC4-202ENST00000430889 COMMD3Q9UBI1 195 aa12.72□□□□□ -0.37
HOXC4-202ENST00000430889 MRTO4Q9UKD2 239 aaKnown RBP12.72□□□□□ -0.37
HOXC4-202ENST00000430889 COPS3Q9UNS2 423 aa12.72□□□□□ -0.37
HOXC4-202ENST00000430889 SLC6A5Q9Y345 797 aa12.72□□□□□ -0.37
HOXC4-202ENST00000430889 GRIP1Q9Y3R0 1128 aa12.72□□□□□ -0.37
HOXC4-202ENST00000430889 CABIN1Q9Y6J0 2220 aa12.71□□□□□ -0.37
HOXC4-202ENST00000430889 LY6G6EA0A0G2JKS1 128 aa12.71□□□□□ -0.37
HOXC4-202ENST00000430889 PLA2G10O15496 165 aa12.71□□□□□ -0.37
HOXC4-202ENST00000430889 CD14P08571 375 aa12.71□□□□□ -0.37
HOXC4-202ENST00000430889 SHC1P29353 583 aa12.71□□□□□ -0.37
HOXC4-202ENST00000430889 RPL4P36578 427 aaKnown RBP12.71□□□□□ -0.37
HOXC4-202ENST00000430889 AQP2P41181 271 aa12.71□□□□□ -0.37
HOXC4-202ENST00000430889 CASP3P42574 277 aa12.71□□□□□ -0.37
HOXC4-202ENST00000430889 CDKN2AP42771 156 aaKnown RBP12.71□□□□□ -0.37
HOXC4-202ENST00000430889 SLC6A8P48029 635 aa12.71□□□□□ -0.37
HOXC4-202ENST00000430889 HCCSP53701 268 aa12.71□□□□□ -0.37
HOXC4-202ENST00000430889 ACTA2P62736 377 aa12.71□□□□□ -0.37
HOXC4-202ENST00000430889 ERVK-25P63136 954 aa12.71□□□□□ -0.37
HOXC4-202ENST00000430889 ACTG2P63267 376 aa12.71□□□□□ -0.37
HOXC4-202ENST00000430889 SCN1BQ07699 218 aa12.71□□□□□ -0.37
HOXC4-202ENST00000430889 CDK5R1Q15078 307 aa12.71□□□□□ -0.37
HOXC4-202ENST00000430889 SNAP47Q5SQN1 464 aa12.71□□□□□ -0.37
HOXC4-202ENST00000430889 ZNF684Q5T5D7 378 aa12.71□□□□□ -0.37
HOXC4-202ENST00000430889 FAM27D1Q5T7N8 215 aa12.71□□□□□ -0.37
HOXC4-202ENST00000430889 RPTNQ6XPR3 784 aa12.71□□□□□ -0.37
HOXC4-202ENST00000430889 TRILQ7L0X0 811 aa12.71□□□□□ -0.37
HOXC4-202ENST00000430889 TMPRSS9Q7Z410 1059 aa12.71□□□□□ -0.37
HOXC4-202ENST00000430889 TPRA1Q86W33 373 aa12.71□□□□□ -0.37
HOXC4-202ENST00000430889 PRR22Q8IZ63 422 aa12.71□□□□□ -0.37
HOXC4-202ENST00000430889 DAZLQ92904 295 aaKnown RBP12.71□□□□□ -0.37
HOXC4-202ENST00000430889 RNF166Q96A37 237 aaPredicted RBP12.71□□□□□ -0.37
HOXC4-202ENST00000430889 KCTD12Q96CX2 325 aaKnown RBP12.71□□□□□ -0.37
HOXC4-202ENST00000430889 ELF4Q99607 663 aaPredicted RBP12.71□□□□□ -0.37
HOXC4-202ENST00000430889 TGIF2Q9GZN2 237 aa12.71□□□□□ -0.37
HOXC4-202ENST00000430889 U3KQA8 63 aa12.71□□□□□ -0.37
HOXC4-202ENST00000430889 IGLV3-12A0A075B6K2 115 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 OR6C76A6NM76 312 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 TOX3O15405 576 aaPredicted RBP12.7□□□□□ -0.38
HOXC4-202ENST00000430889 GLCEO94923 617 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 HPGDP15428 266 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 PNLIPP16233 465 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 APEX1P27695 318 aaKnown RBP12.7□□□□□ -0.38
HOXC4-202ENST00000430889 PYCR1P32322 319 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 RPS11P62280 158 aaKnown RBP eCLIP12.7□□□□□ -0.38
HOXC4-202ENST00000430889 ZP2Q05996 745 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 SLC3A1Q07837 685 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 LGALS3BPQ08380 585 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 PON3Q15166 354 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 NSDHLQ15738 373 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 ARHGAP40Q5TG30 622 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 MZT2AQ6P582 158 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 ZNF574Q6ZN55 896 aaPredicted RBP12.7□□□□□ -0.38
HOXC4-202ENST00000430889 UBQLNLQ8IYU4 475 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 MS4A15Q8N5U1 240 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 OR51L1Q8NGJ5 315 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 CCDC74AQ96AQ1 378 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 SMIM19Q96E16 107 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 Q96M85 177 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 LPAR4Q99677 370 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 MFRPQ9BY79 579 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 NRSN2Q9GZP1 204 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 KLHL1Q9NR64 748 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 FGF21Q9NSA1 209 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 NPAP1Q9NZP6 1156 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 NCDNQ9UBB6 729 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 COLQQ9Y215 455 aaPredicted RBP12.7□□□□□ -0.38
HOXC4-202ENST00000430889 USP34Q70CQ2 3546 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 TRIOBPQ9H2D6 2365 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 TEX13CA0A0J9YWL9 993 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 A0A1W2PPC1 479 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 C4orf47A7E2U8 309 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 A8MU76 341 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 EIF4E2O60573 245 aaKnown RBP12.7□□□□□ -0.38
HOXC4-202ENST00000430889 SLC19A2O60779 497 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 TMCC2O75069 709 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 BGLAPP02818 100 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 TACR3P29371 465 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 NAA10P41227 235 aaPredicted RBP12.7□□□□□ -0.38
HOXC4-202ENST00000430889 PI4KAP42356 2102 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 GRK6P43250 576 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 EIF2B2P49770 351 aaKnown RBP12.7□□□□□ -0.38
HOXC4-202ENST00000430889 PNLIPRP2P54317 469 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 HSF2Q03933 536 aa12.7□□□□□ -0.38
HOXC4-202ENST00000430889 P2RY14Q15391 338 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms