RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 UQCRC1P31930 480 aa12.99□□□□□ -0.33
SGCE-204ENST00000428696 KIR2DL2P43627 348 aaPredicted RBP12.99□□□□□ -0.33
SGCE-204ENST00000428696 EGR4Q05215 589 aa12.99□□□□□ -0.33
SGCE-204ENST00000428696 FGD3Q5JSP0 725 aa12.99□□□□□ -0.33
SGCE-204ENST00000428696 VWA1Q6PCB0 445 aa12.99□□□□□ -0.33
SGCE-204ENST00000428696 WDR88Q6ZMY6 472 aa12.99□□□□□ -0.33
SGCE-204ENST00000428696 FAM214BQ7L5A3 538 aa12.99□□□□□ -0.33
SGCE-204ENST00000428696 HIST3H2AQ7L7L0 130 aa12.99□□□□□ -0.33
SGCE-204ENST00000428696 RRM2BQ7LG56 351 aa12.99□□□□□ -0.33
SGCE-204ENST00000428696 BTLAQ7Z6A9 289 aa12.99□□□□□ -0.33
SGCE-204ENST00000428696 SPATA24Q86W54 205 aa12.99□□□□□ -0.33
SGCE-204ENST00000428696 KDM8Q8N371 416 aa12.99□□□□□ -0.33
SGCE-204ENST00000428696 OR52J3Q8NH60 311 aa12.99□□□□□ -0.33
SGCE-204ENST00000428696 MFSD8Q8NHS3 518 aa12.99□□□□□ -0.33
SGCE-204ENST00000428696 RNF128Q8TEB7 428 aa12.99□□□□□ -0.33
SGCE-204ENST00000428696 TMEM255BQ8WV15 326 aa12.99□□□□□ -0.33
SGCE-204ENST00000428696 HIST1H2ACQ93077 130 aa12.99□□□□□ -0.33
SGCE-204ENST00000428696 ASB9Q96DX5 294 aa12.99□□□□□ -0.33
SGCE-204ENST00000428696 GMPPAQ96IJ6 420 aaPredicted RBP12.99□□□□□ -0.33
SGCE-204ENST00000428696 MPP4Q96JB8 637 aa12.99□□□□□ -0.33
SGCE-204ENST00000428696 PRRC1Q96M27 445 aa12.99□□□□□ -0.33
SGCE-204ENST00000428696 SFXN3Q9BWM7 321 aa12.99□□□□□ -0.33
SGCE-204ENST00000428696 MUC13Q9H3R2 512 aa12.99□□□□□ -0.33
SGCE-204ENST00000428696 GLRX2Q9NS18 164 aa12.99□□□□□ -0.33
SGCE-204ENST00000428696 KLHL9Q9P2J3 617 aa12.99□□□□□ -0.33
SGCE-204ENST00000428696 A4GNTQ9UNA3 340 aa12.99□□□□□ -0.33
SGCE-204ENST00000428696 ENPP4Q9Y6X5 453 aa12.99□□□□□ -0.33
SGCE-204ENST00000428696 KIAA1549Q9HCM3 1950 aa12.98□□□□□ -0.33
SGCE-204ENST00000428696 ZNF814B7Z6K7 855 aa12.98□□□□□ -0.33
SGCE-204ENST00000428696 LRRN3E7EW58 273 aa12.98□□□□□ -0.33
SGCE-204ENST00000428696 CYTIPO60759 359 aa12.98□□□□□ -0.33
SGCE-204ENST00000428696 RAMP1O60894 148 aa12.98□□□□□ -0.33
SGCE-204ENST00000428696 LYPD3O95274 346 aa12.98□□□□□ -0.33
SGCE-204ENST00000428696 CLDN1O95832 211 aa12.98□□□□□ -0.33
SGCE-204ENST00000428696 FABP3P05413 133 aa12.98□□□□□ -0.33
SGCE-204ENST00000428696 YES1P07947 543 aa12.98□□□□□ -0.33
SGCE-204ENST00000428696 ITGA2P17301 1181 aa12.98□□□□□ -0.33
SGCE-204ENST00000428696 PMS2P3Q13401 168 aa12.98□□□□□ -0.33
SGCE-204ENST00000428696 FLOT2Q14254 428 aa12.98□□□□□ -0.33
SGCE-204ENST00000428696 TRAM2Q15035 370 aa12.98□□□□□ -0.33
SGCE-204ENST00000428696 FXNQ16595 210 aa12.98□□□□□ -0.33
SGCE-204ENST00000428696 FAM69AQ5T7M9 428 aa12.98□□□□□ -0.33
SGCE-204ENST00000428696 EEF1A1P5Q5VTE0 462 aa12.98□□□□□ -0.33
SGCE-204ENST00000428696 ZNF610Q8N9Z0 462 aa12.98□□□□□ -0.33
SGCE-204ENST00000428696 PIGXQ8TBF5 258 aa12.98□□□□□ -0.33
SGCE-204ENST00000428696 TMEM239Q8WW34 195 aa12.98□□□□□ -0.33
SGCE-204ENST00000428696 LRRC46Q96FV0 321 aa12.98□□□□□ -0.33
SGCE-204ENST00000428696 ZNF300Q96RE9 604 aaPredicted RBP12.98□□□□□ -0.33
SGCE-204ENST00000428696 TMEM43Q9BTV4 400 aa12.98□□□□□ -0.33
SGCE-204ENST00000428696 ASPNQ9BXN1 380 aa12.98□□□□□ -0.33
SGCE-204ENST00000428696 POLR2J2Q9GZM3 115 aaKnown RBP12.98□□□□□ -0.33
SGCE-204ENST00000428696 POLR2J3Q9H1A7 115 aaKnown RBP12.98□□□□□ -0.33
SGCE-204ENST00000428696 OPN3Q9H1Y3 402 aaPredicted RBP12.98□□□□□ -0.33
SGCE-204ENST00000428696 NDUFAF4Q9P032 175 aa12.98□□□□□ -0.33
SGCE-204ENST00000428696 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.98□□□□□ -0.33
SGCE-204ENST00000428696 PROCRQ9UNN8 238 aa12.98□□□□□ -0.33
SGCE-204ENST00000428696 AURKCQ9UQB9 309 aa12.98□□□□□ -0.33
SGCE-204ENST00000428696 TESMINQ9Y4I5 508 aa12.98□□□□□ -0.33
SGCE-204ENST00000428696 UTP20O75691 2785 aaKnown RBP12.97□□□□□ -0.33
SGCE-204ENST00000428696 M0R082 166 aa12.97□□□□□ -0.33
SGCE-204ENST00000428696 FFAR1O14842 300 aa12.97□□□□□ -0.33
SGCE-204ENST00000428696 SS18L1O75177 396 aaPredicted RBP12.97□□□□□ -0.33
SGCE-204ENST00000428696 NPIPB7O75200 414 aa12.97□□□□□ -0.33
SGCE-204ENST00000428696 SERPINI2O75830 405 aa12.97□□□□□ -0.33
SGCE-204ENST00000428696 OR6A2O95222 327 aa12.97□□□□□ -0.33
SGCE-204ENST00000428696 CRHP06850 196 aa12.97□□□□□ -0.33
SGCE-204ENST00000428696 COL8A1P27658 744 aa12.97□□□□□ -0.33
SGCE-204ENST00000428696 GRPRP30550 384 aa12.97□□□□□ -0.33
SGCE-204ENST00000428696 VLDLRP98155 873 aa12.97□□□□□ -0.33
SGCE-204ENST00000428696 SPIBQ01892 262 aa12.97□□□□□ -0.33
SGCE-204ENST00000428696 CHRNB3Q05901 458 aa12.97□□□□□ -0.33
SGCE-204ENST00000428696 TRAP1Q12931 704 aaKnown RBP12.97□□□□□ -0.33
SGCE-204ENST00000428696 C1DQ13901 141 aaKnown RBP12.97□□□□□ -0.33
SGCE-204ENST00000428696 SLC25A35Q3KQZ1 300 aa12.97□□□□□ -0.33
SGCE-204ENST00000428696 FAM98BQ52LJ0 330 aaKnown RBP12.97□□□□□ -0.33
SGCE-204ENST00000428696 LCN8Q6JVE9 175 aa12.97□□□□□ -0.33
SGCE-204ENST00000428696 PAQR6Q6TCH4 344 aa12.97□□□□□ -0.33
SGCE-204ENST00000428696 C5orf46Q6UWT4 87 aa12.97□□□□□ -0.33
SGCE-204ENST00000428696 ZNF730Q6ZMV8 503 aa12.97□□□□□ -0.33
SGCE-204ENST00000428696 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.97□□□□□ -0.33
SGCE-204ENST00000428696 MAMDC2Q7Z304 686 aaPredicted RBP12.97□□□□□ -0.33
SGCE-204ENST00000428696 NUFIP2Q7Z417 695 aaKnown RBP12.97□□□□□ -0.33
SGCE-204ENST00000428696 MEX3DQ86XN8 651 aaKnown RBP12.97□□□□□ -0.33
SGCE-204ENST00000428696 ZDHHC21Q8IVQ6 265 aa12.97□□□□□ -0.33
SGCE-204ENST00000428696 PFN4Q8NHR9 129 aa12.97□□□□□ -0.33
SGCE-204ENST00000428696 ZNF417Q8TAU3 575 aa12.97□□□□□ -0.33
SGCE-204ENST00000428696 STARD4Q96DR4 205 aa12.97□□□□□ -0.33
SGCE-204ENST00000428696 C7orf34Q96L11 122 aa12.97□□□□□ -0.33
SGCE-204ENST00000428696 MOGAT1Q96PD6 335 aa12.97□□□□□ -0.33
SGCE-204ENST00000428696 ZNF587Q96SQ5 575 aaPredicted RBP12.97□□□□□ -0.33
SGCE-204ENST00000428696 PRSS27Q9BQR3 290 aa12.97□□□□□ -0.33
SGCE-204ENST00000428696 PTDSS2Q9BVG9 487 aa12.97□□□□□ -0.33
SGCE-204ENST00000428696 KLHL4Q9C0H6 718 aa12.97□□□□□ -0.33
SGCE-204ENST00000428696 NMNAT1Q9HAN9 279 aaPredicted RBP12.97□□□□□ -0.33
SGCE-204ENST00000428696 EMC3Q9P0I2 261 aa12.97□□□□□ -0.33
SGCE-204ENST00000428696 SEC14L4Q9UDX3 406 aa12.97□□□□□ -0.33
SGCE-204ENST00000428696 MED31Q9Y3C7 131 aa12.97□□□□□ -0.33
SGCE-204ENST00000428696 ACOT8O14734 319 aa12.96□□□□□ -0.33
SGCE-204ENST00000428696 DNPH1O43598 174 aa12.96□□□□□ -0.33
SGCE-204ENST00000428696 TNFSF13O75888 250 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms