RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 ZSWIM7Q19AV6 140 aa16.19■□□□□ 0.18
PSPC1-202ENST00000427943 GCNT6Q5T4J0 391 aa16.19■□□□□ 0.18
PSPC1-202ENST00000427943 TSPO2Q5TGU0 170 aa16.19■□□□□ 0.18
PSPC1-202ENST00000427943 C1orf140Q5VVS0 124 aa16.19■□□□□ 0.18
PSPC1-202ENST00000427943 PRAMEF8Q5VWM4 474 aa16.19■□□□□ 0.18
PSPC1-202ENST00000427943 PRAMEF7Q5VXH5 474 aa16.19■□□□□ 0.18
PSPC1-202ENST00000427943 GPAT4Q86UL3 456 aa16.19■□□□□ 0.18
PSPC1-202ENST00000427943 P2RY8Q86VZ1 359 aa16.19■□□□□ 0.18
PSPC1-202ENST00000427943 OR9K2Q8NGE7 335 aa16.19■□□□□ 0.18
PSPC1-202ENST00000427943 SMAP2Q8WU79 429 aaPredicted RBP16.19■□□□□ 0.18
PSPC1-202ENST00000427943 ZNF385AQ96PM9 386 aaKnown RBP16.19■□□□□ 0.18
PSPC1-202ENST00000427943 BDH2Q9BUT1 245 aa16.19■□□□□ 0.18
PSPC1-202ENST00000427943 RSPO3Q9BXY4 272 aaPredicted RBP16.19■□□□□ 0.18
PSPC1-202ENST00000427943 IKZF5Q9H5V7 419 aa16.19■□□□□ 0.18
PSPC1-202ENST00000427943 SLC25A15Q9Y619 301 aa16.19■□□□□ 0.18
PSPC1-202ENST00000427943 PLCE1Q9P212 2302 aa16.19■□□□□ 0.18
PSPC1-202ENST00000427943 ZANQ9Y493 2812 aa16.18■□□□□ 0.18
PSPC1-202ENST00000427943 TRBV5-3A0A0A0MS03 114 aa16.18■□□□□ 0.18
PSPC1-202ENST00000427943 TMCC2O75069 709 aa16.18■□□□□ 0.18
PSPC1-202ENST00000427943 ATP4BP51164 291 aa16.18■□□□□ 0.18
PSPC1-202ENST00000427943 SQLEQ14534 574 aa16.18■□□□□ 0.18
PSPC1-202ENST00000427943 GABRA6Q16445 453 aa16.18■□□□□ 0.18
PSPC1-202ENST00000427943 PGGHGQ32M88 737 aa16.18■□□□□ 0.18
PSPC1-202ENST00000427943 HDXQ7Z353 690 aa16.18■□□□□ 0.18
PSPC1-202ENST00000427943 COMTD1Q86VU5 262 aa16.18■□□□□ 0.18
PSPC1-202ENST00000427943 PIAS4Q8N2W9 510 aaPredicted RBP16.18■□□□□ 0.18
PSPC1-202ENST00000427943 GTPBP3Q969Y2 492 aaKnown RBP16.18■□□□□ 0.18
PSPC1-202ENST00000427943 PARPBPQ9NWS1 579 aa16.18■□□□□ 0.18
PSPC1-202ENST00000427943 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.18■□□□□ 0.18
PSPC1-202ENST00000427943 CR1P17927 2039 aa16.18■□□□□ 0.18
PSPC1-202ENST00000427943 M0R1B8 84 aa16.17■□□□□ 0.18
PSPC1-202ENST00000427943 PDLIM1O00151 329 aa16.17■□□□□ 0.18
PSPC1-202ENST00000427943 AHSA1O95433 338 aa16.17■□□□□ 0.18
PSPC1-202ENST00000427943 LY6G6DO95868 133 aa16.17■□□□□ 0.18
PSPC1-202ENST00000427943 HEXAP06865 529 aa16.17■□□□□ 0.18
PSPC1-202ENST00000427943 PTNP21246 168 aa16.17■□□□□ 0.18
PSPC1-202ENST00000427943 PPIBP23284 216 aaKnown RBP16.17■□□□□ 0.18
PSPC1-202ENST00000427943 P2RY4P51582 365 aa16.17■□□□□ 0.18
PSPC1-202ENST00000427943 AAED1Q7RTV5 226 aa16.17■□□□□ 0.18
PSPC1-202ENST00000427943 ZIC4Q8N9L1 334 aa16.17■□□□□ 0.18
PSPC1-202ENST00000427943 CKAP2Q8WWK9 683 aa16.17■□□□□ 0.18
PSPC1-202ENST00000427943 TMEM45BQ96B21 275 aa16.17■□□□□ 0.18
PSPC1-202ENST00000427943 C1QTNF6Q9BXI9 259 aa16.17■□□□□ 0.18
PSPC1-202ENST00000427943 CISD1Q9NZ45 108 aaKnown RBP16.17■□□□□ 0.18
PSPC1-202ENST00000427943 NAV3Q8IVL0 2385 aa16.16■□□□□ 0.18
PSPC1-202ENST00000427943 OVOL3O00110 214 aa16.16■□□□□ 0.18
PSPC1-202ENST00000427943 NPIPB7O75200 414 aa16.16■□□□□ 0.18
PSPC1-202ENST00000427943 ETS2P15036 469 aa16.16■□□□□ 0.18
PSPC1-202ENST00000427943 CDH2P19022 906 aaPredicted RBP16.16■□□□□ 0.18
PSPC1-202ENST00000427943 PRKAR1BP31321 381 aa16.16■□□□□ 0.18
PSPC1-202ENST00000427943 RPS5P46782 204 aaKnown RBP16.16■□□□□ 0.18
PSPC1-202ENST00000427943 SLC25A3Q00325 362 aa16.16■□□□□ 0.18
PSPC1-202ENST00000427943 CDK6Q00534 326 aa16.16■□□□□ 0.18
PSPC1-202ENST00000427943 SCARB2Q14108 478 aa16.16■□□□□ 0.18
PSPC1-202ENST00000427943 GLIPR1L2Q4G1C9 344 aa16.16■□□□□ 0.18
PSPC1-202ENST00000427943 TMEM225Q6GV28 225 aa16.16■□□□□ 0.18
PSPC1-202ENST00000427943 OR7E24Q6IFN5 339 aa16.16■□□□□ 0.18
PSPC1-202ENST00000427943 REEP3Q6NUK4 255 aa16.16■□□□□ 0.18
PSPC1-202ENST00000427943 TMEM108Q6UXF1 575 aa16.16■□□□□ 0.18
PSPC1-202ENST00000427943 SSX8Q7RTT4 187 aa16.16■□□□□ 0.18
PSPC1-202ENST00000427943 STK35Q8TDR2 534 aa16.16■□□□□ 0.18
PSPC1-202ENST00000427943 SLC25A36Q96CQ1 311 aa16.16■□□□□ 0.18
PSPC1-202ENST00000427943 MAGEB18Q96M61 343 aa16.16■□□□□ 0.18
PSPC1-202ENST00000427943 MUS81Q96NY9 551 aa16.16■□□□□ 0.18
PSPC1-202ENST00000427943 CPPED1Q9BRF8 314 aaPredicted RBP16.16■□□□□ 0.18
PSPC1-202ENST00000427943 PTDSS2Q9BVG9 487 aa16.16■□□□□ 0.18
PSPC1-202ENST00000427943 SF3B5Q9BWJ5 86 aaKnown RBP16.16■□□□□ 0.18
PSPC1-202ENST00000427943 SLCO5A1Q9H2Y9 848 aa16.16■□□□□ 0.18
PSPC1-202ENST00000427943 ARGLU1Q9NWB6 273 aaPredicted RBP16.16■□□□□ 0.18
PSPC1-202ENST00000427943 RPS6KB2Q9UBS0 482 aa16.16■□□□□ 0.18
PSPC1-202ENST00000427943 DCTN4Q9UJW0 460 aa16.16■□□□□ 0.18
PSPC1-202ENST00000427943 PRDM4Q9UKN5 801 aa16.16■□□□□ 0.18
PSPC1-202ENST00000427943 ELOA3DA6NLF2 546 aaPredicted RBP16.15■□□□□ 0.18
PSPC1-202ENST00000427943 TPST1O60507 370 aa16.15■□□□□ 0.18
PSPC1-202ENST00000427943 H2AFXP16104 143 aaPredicted RBP16.15■□□□□ 0.18
PSPC1-202ENST00000427943 HTR2AP28223 471 aa16.15■□□□□ 0.18
PSPC1-202ENST00000427943 AQP1P29972 269 aa16.15■□□□□ 0.18
PSPC1-202ENST00000427943 EGR4Q05215 589 aa16.15■□□□□ 0.18
PSPC1-202ENST00000427943 LGALS3BPQ08380 585 aa16.15■□□□□ 0.18
PSPC1-202ENST00000427943 ELOA3BQ3SY89 546 aa16.15■□□□□ 0.18
PSPC1-202ENST00000427943 SLC22A25Q6T423 547 aa16.15■□□□□ 0.18
PSPC1-202ENST00000427943 KLHL17Q6TDP4 642 aa16.15■□□□□ 0.18
PSPC1-202ENST00000427943 KRT73Q86Y46 540 aa16.15■□□□□ 0.18
PSPC1-202ENST00000427943 WDR31Q8NA23 367 aa16.15■□□□□ 0.18
PSPC1-202ENST00000427943 ELOA3Q8NG57 546 aa16.15■□□□□ 0.18
PSPC1-202ENST00000427943 SLC35B4Q969S0 331 aa16.15■□□□□ 0.18
PSPC1-202ENST00000427943 KTI12Q96EK9 354 aaPredicted RBP16.15■□□□□ 0.18
PSPC1-202ENST00000427943 TRMT61AQ96FX7 289 aaKnown RBP16.15■□□□□ 0.18
PSPC1-202ENST00000427943 TRAF4Q9BUZ4 470 aaPredicted RBP16.15■□□□□ 0.18
PSPC1-202ENST00000427943 PRR14Q9BWN1 585 aa16.15■□□□□ 0.18
PSPC1-202ENST00000427943 AMBRA1Q9C0C7 1298 aa16.15■□□□□ 0.18
PSPC1-202ENST00000427943 ALG2Q9H553 416 aa16.15■□□□□ 0.18
PSPC1-202ENST00000427943 VIPAS39Q9H9C1 493 aa16.15■□□□□ 0.18
PSPC1-202ENST00000427943 NPHS2Q9NP85 383 aa16.15■□□□□ 0.18
PSPC1-202ENST00000427943 SLC17A5Q9NRA2 495 aa16.15■□□□□ 0.18
PSPC1-202ENST00000427943 SEC14L4Q9UDX3 406 aa16.15■□□□□ 0.18
PSPC1-202ENST00000427943 POU2F3Q9UKI9 436 aa16.15■□□□□ 0.18
PSPC1-202ENST00000427943 TLN2Q9Y4G6 2542 aa16.15■□□□□ 0.18
PSPC1-202ENST00000427943 A0A1B0GWA3 101 aa16.14■□□□□ 0.17
PSPC1-202ENST00000427943 FAM171A2A8MVW0 826 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms