RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 PLAUP00749 431 aa13.15□□□□□ -0.3
RTN4-210ENST00000427710 COX4I1P13073 169 aa13.15□□□□□ -0.3
RTN4-210ENST00000427710 PSMB1P20618 241 aaKnown RBP13.15□□□□□ -0.3
RTN4-210ENST00000427710 CD247P20963 164 aa13.15□□□□□ -0.3
RTN4-210ENST00000427710 DRD4P21917 467 aa13.15□□□□□ -0.3
RTN4-210ENST00000427710 IGHV1-2P23083 117 aa13.15□□□□□ -0.3
RTN4-210ENST00000427710 P2RY4P51582 365 aa13.15□□□□□ -0.3
RTN4-210ENST00000427710 CRYBA2P53672 197 aa13.15□□□□□ -0.3
RTN4-210ENST00000427710 SLC16A1P53985 500 aa13.15□□□□□ -0.3
RTN4-210ENST00000427710 PDK3Q15120 406 aa13.15□□□□□ -0.3
RTN4-210ENST00000427710 NPTX1Q15818 432 aa13.15□□□□□ -0.3
RTN4-210ENST00000427710 VMACQ2NL98 169 aa13.15□□□□□ -0.3
RTN4-210ENST00000427710 PAQR6Q6TCH4 344 aa13.15□□□□□ -0.3
RTN4-210ENST00000427710 CASP12Q6UXS9 341 aa13.15□□□□□ -0.3
RTN4-210ENST00000427710 SPATA21Q7Z572 469 aa13.15□□□□□ -0.3
RTN4-210ENST00000427710 CALHM3Q86XJ0 350 aa13.15□□□□□ -0.3
RTN4-210ENST00000427710 UBE2J2Q8N2K1 259 aa13.15□□□□□ -0.3
RTN4-210ENST00000427710 KDM8Q8N371 416 aa13.15□□□□□ -0.3
RTN4-210ENST00000427710 STK35Q8TDR2 534 aa13.15□□□□□ -0.3
RTN4-210ENST00000427710 KISS1RQ969F8 398 aaPredicted RBP13.15□□□□□ -0.3
RTN4-210ENST00000427710 MCHR1Q99705 422 aa13.15□□□□□ -0.3
RTN4-210ENST00000427710 ARHGDIGQ99819 225 aa13.15□□□□□ -0.3
RTN4-210ENST00000427710 PTDSS2Q9BVG9 487 aa13.15□□□□□ -0.3
RTN4-210ENST00000427710 TAPBPLQ9BX59 468 aa13.15□□□□□ -0.3
RTN4-210ENST00000427710 TRIM2Q9C040 744 aa13.15□□□□□ -0.3
RTN4-210ENST00000427710 FANCFQ9NPI8 374 aa13.15□□□□□ -0.3
RTN4-210ENST00000427710 FLVCR1Q9Y5Y0 555 aa13.15□□□□□ -0.3
RTN4-210ENST00000427710 HIVEP1P15822 2718 aa13.14□□□□□ -0.31
RTN4-210ENST00000427710 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.14□□□□□ -0.31
RTN4-210ENST00000427710 AQP7P3A6NL99 342 aa13.14□□□□□ -0.31
RTN4-210ENST00000427710 CPSF4LA6NMK7 179 aaKnown RBP13.14□□□□□ -0.31
RTN4-210ENST00000427710 AIM2O14862 343 aa13.14□□□□□ -0.31
RTN4-210ENST00000427710 KLF4O43474 513 aa13.14□□□□□ -0.31
RTN4-210ENST00000427710 EIF1BO60739 113 aaKnown RBP13.14□□□□□ -0.31
RTN4-210ENST00000427710 AHSA1O95433 338 aa13.14□□□□□ -0.31
RTN4-210ENST00000427710 TNFRSF1BP20333 461 aa13.14□□□□□ -0.31
RTN4-210ENST00000427710 MAP2K6P52564 334 aa13.14□□□□□ -0.31
RTN4-210ENST00000427710 ART1P52961 327 aa13.14□□□□□ -0.31
RTN4-210ENST00000427710 ITGADQ13349 1161 aa13.14□□□□□ -0.31
RTN4-210ENST00000427710 SLC17A1Q14916 467 aa13.14□□□□□ -0.31
RTN4-210ENST00000427710 STK11Q15831 433 aa13.14□□□□□ -0.31
RTN4-210ENST00000427710 NRF1Q16656 503 aa13.14□□□□□ -0.31
RTN4-210ENST00000427710 COQ5Q5HYK3 327 aa13.14□□□□□ -0.31
RTN4-210ENST00000427710 ALG10BQ5I7T1 473 aa13.14□□□□□ -0.31
RTN4-210ENST00000427710 C9orf135Q5VTT2 229 aa13.14□□□□□ -0.31
RTN4-210ENST00000427710 PAMR1Q6UXH9 720 aa13.14□□□□□ -0.31
RTN4-210ENST00000427710 Q6ZT83 130 aa13.14□□□□□ -0.31
RTN4-210ENST00000427710 GPAT4Q86UL3 456 aa13.14□□□□□ -0.31
RTN4-210ENST00000427710 LSMEM1Q8N8F7 131 aa13.14□□□□□ -0.31
RTN4-210ENST00000427710 PCYOX1LQ8NBM8 494 aa13.14□□□□□ -0.31
RTN4-210ENST00000427710 STEAP2Q8NFT2 490 aa13.14□□□□□ -0.31
RTN4-210ENST00000427710 OR9K2Q8NGE7 335 aa13.14□□□□□ -0.31
RTN4-210ENST00000427710 OR8J3Q8NGG0 315 aa13.14□□□□□ -0.31
RTN4-210ENST00000427710 OR6T1Q8NGN1 323 aa13.14□□□□□ -0.31
RTN4-210ENST00000427710 SLC26A7Q8TE54 656 aa13.14□□□□□ -0.31
RTN4-210ENST00000427710 TAAR8Q969N4 342 aa13.14□□□□□ -0.31
RTN4-210ENST00000427710 APH1AQ96BI3 265 aa13.14□□□□□ -0.31
RTN4-210ENST00000427710 ZNF583Q96ND8 569 aa13.14□□□□□ -0.31
RTN4-210ENST00000427710 ZNF385AQ96PM9 386 aaKnown RBP13.14□□□□□ -0.31
RTN4-210ENST00000427710 UBTD1Q9HAC8 227 aa13.14□□□□□ -0.31
RTN4-210ENST00000427710 TMEM27Q9HBJ8 222 aa13.14□□□□□ -0.31
RTN4-210ENST00000427710 GID8Q9NWU2 228 aa13.14□□□□□ -0.31
RTN4-210ENST00000427710 TESQ9UGI8 421 aaKnown RBP13.14□□□□□ -0.31
RTN4-210ENST00000427710 FTCDNL1E5RQL4 147 aa13.13□□□□□ -0.31
RTN4-210ENST00000427710 GPR171O14626 319 aa13.13□□□□□ -0.31
RTN4-210ENST00000427710 SHOX2O60902 331 aaPredicted RBP13.13□□□□□ -0.31
RTN4-210ENST00000427710 MRPL33O75394 65 aaKnown RBP13.13□□□□□ -0.31
RTN4-210ENST00000427710 PPP3CBP16298 524 aa13.13□□□□□ -0.31
RTN4-210ENST00000427710 DNASE1P24855 282 aa13.13□□□□□ -0.31
RTN4-210ENST00000427710 LSP1P33241 339 aa13.13□□□□□ -0.31
RTN4-210ENST00000427710 CDH12P55289 794 aa13.13□□□□□ -0.31
RTN4-210ENST00000427710 GNGT1P63211 74 aa13.13□□□□□ -0.31
RTN4-210ENST00000427710 FAPQ12884 760 aa13.13□□□□□ -0.31
RTN4-210ENST00000427710 TESK1Q15569 626 aa13.13□□□□□ -0.31
RTN4-210ENST00000427710 TAB1Q15750 504 aa13.13□□□□□ -0.31
RTN4-210ENST00000427710 C6orf89Q6UWU4 347 aa13.13□□□□□ -0.31
RTN4-210ENST00000427710 PATL1Q86TB9 770 aaKnown RBP13.13□□□□□ -0.31
RTN4-210ENST00000427710 TSPYL5Q86VY4 417 aaPredicted RBP13.13□□□□□ -0.31
RTN4-210ENST00000427710 SLC30A8Q8IWU4 369 aa13.13□□□□□ -0.31
RTN4-210ENST00000427710 ZNF433Q8N7K0 673 aaPredicted RBP13.13□□□□□ -0.31
RTN4-210ENST00000427710 ZIC4Q8N9L1 334 aa13.13□□□□□ -0.31
RTN4-210ENST00000427710 BHLHE22Q8NFJ8 381 aaPredicted RBP13.13□□□□□ -0.31
RTN4-210ENST00000427710 RP9Q8TA86 221 aaKnown RBP13.13□□□□□ -0.31
RTN4-210ENST00000427710 PLPPR2Q96GM1 343 aa13.13□□□□□ -0.31
RTN4-210ENST00000427710 SH3GL1Q99961 368 aa13.13□□□□□ -0.31
RTN4-210ENST00000427710 MRGBPQ9NV56 204 aa13.13□□□□□ -0.31
RTN4-210ENST00000427710 CMTM6Q9NX76 183 aa13.13□□□□□ -0.31
RTN4-210ENST00000427710 ACANP16112 2415 aa13.13□□□□□ -0.31
RTN4-210ENST00000427710 A0A0B4J2E0 115 aa13.12□□□□□ -0.31
RTN4-210ENST00000427710 A0A1B0GX12 115 aa13.12□□□□□ -0.31
RTN4-210ENST00000427710 A0A1W2PR80 420 aa13.12□□□□□ -0.31
RTN4-210ENST00000427710 LRRN3E7EW58 273 aa13.12□□□□□ -0.31
RTN4-210ENST00000427710 CCDC22O60826 627 aa13.12□□□□□ -0.31
RTN4-210ENST00000427710 RAD51DO75771 328 aa13.12□□□□□ -0.31
RTN4-210ENST00000427710 ATE1O95260 518 aa13.12□□□□□ -0.31
RTN4-210ENST00000427710 THY1P04216 161 aa13.12□□□□□ -0.31
RTN4-210ENST00000427710 PNMTP11086 282 aa13.12□□□□□ -0.31
RTN4-210ENST00000427710 LTBQ06643 244 aa13.12□□□□□ -0.31
RTN4-210ENST00000427710 LGALS3BPQ08380 585 aa13.12□□□□□ -0.31
RTN4-210ENST00000427710 FOXD4Q12950 439 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms