RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 ULK3Q6PHR2 472 aa13.98□□□□□ -0.17
C9orf3-204ENST00000424143 HIST3H2AQ7L7L0 130 aa13.98□□□□□ -0.17
C9orf3-204ENST00000424143 HSD17B13Q7Z5P4 300 aaPredicted RBP13.98□□□□□ -0.17
C9orf3-204ENST00000424143 DNAAF1Q8NEP3 725 aa13.98□□□□□ -0.17
C9orf3-204ENST00000424143 OR52E2Q8NGJ4 325 aa13.98□□□□□ -0.17
C9orf3-204ENST00000424143 OR51A7Q8NH64 312 aa13.98□□□□□ -0.17
C9orf3-204ENST00000424143 OIT3Q8WWZ8 545 aa13.98□□□□□ -0.17
C9orf3-204ENST00000424143 ASB12Q8WXK4 309 aa13.98□□□□□ -0.17
C9orf3-204ENST00000424143 THRSPQ92748 146 aa13.98□□□□□ -0.17
C9orf3-204ENST00000424143 HIST1H2ACQ93077 130 aa13.98□□□□□ -0.17
C9orf3-204ENST00000424143 PNPLA2Q96AD5 504 aa13.98□□□□□ -0.17
C9orf3-204ENST00000424143 DACT3Q96B18 629 aaPredicted RBP13.98□□□□□ -0.17
C9orf3-204ENST00000424143 DERL3Q96Q80 235 aa13.98□□□□□ -0.17
C9orf3-204ENST00000424143 OR14A2Q96R54 314 aa13.98□□□□□ -0.17
C9orf3-204ENST00000424143 MNTQ99583 582 aa13.98□□□□□ -0.17
C9orf3-204ENST00000424143 LMF2Q9BU23 707 aaKnown RBP13.98□□□□□ -0.17
C9orf3-204ENST00000424143 SLC19A3Q9BZV2 496 aa13.98□□□□□ -0.17
C9orf3-204ENST00000424143 NOX4Q9NPH5 578 aa13.98□□□□□ -0.17
C9orf3-204ENST00000424143 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.98□□□□□ -0.17
C9orf3-204ENST00000424143 SDHAF2Q9NX18 166 aa13.98□□□□□ -0.17
C9orf3-204ENST00000424143 FLRT3Q9NZU0 649 aa13.98□□□□□ -0.17
C9orf3-204ENST00000424143 CYB5R1Q9UHQ9 305 aa13.98□□□□□ -0.17
C9orf3-204ENST00000424143 PCOLCE2Q9UKZ9 415 aa13.98□□□□□ -0.17
C9orf3-204ENST00000424143 OR1A2Q9Y585 309 aa13.98□□□□□ -0.17
C9orf3-204ENST00000424143 RFXAPO00287 272 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 CTNSO60931 367 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 FKTNO75072 461 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 EGFP01133 1207 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 MELTFP08582 738 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 TACSTD2P09758 323 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 CXCL2P19875 107 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 P2RX1P51575 399 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 ART1P52961 327 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 PSMD4P55036 377 aaKnown RBP13.97□□□□□ -0.17
C9orf3-204ENST00000424143 PSMA6P60900 246 aaKnown RBP13.97□□□□□ -0.17
C9orf3-204ENST00000424143 ZNF267Q14586 743 aaPredicted RBP13.97□□□□□ -0.17
C9orf3-204ENST00000424143 PRICKLE4Q2TBC4 344 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 TRMT12Q53H54 448 aaKnown RBP13.97□□□□□ -0.17
C9orf3-204ENST00000424143 SFRP4Q6FHJ7 346 aaPredicted RBP13.97□□□□□ -0.17
C9orf3-204ENST00000424143 APOOLQ6UXV4 268 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 MEIOBQ8N635 442 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 CYB561A3Q8NBI2 242 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 NPEPL1Q8NDH3 523 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 FLVCR1-AS1Q8TAF5 88 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 COL26A1Q96A83 441 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 SGTBQ96EQ0 304 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 KLHL15Q96M94 604 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 SLITRK2Q9H156 845 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 TAS2R10Q9NYW0 307 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 MOKQ9UQ07 419 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 INSL6Q9Y581 213 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 A0A0B4J203 849 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 TRBV5-5A0A0J9YX44 114 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 EFCAB7A8K855 629 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 PEX12O00623 359 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 IMPA2O14732 288 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 ARPC1BO15143 372 aaKnown RBP13.97□□□□□ -0.17
C9orf3-204ENST00000424143 KHDRBS3O75525 346 aaKnown RBP13.97□□□□□ -0.17
C9orf3-204ENST00000424143 GLCEO94923 617 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 PPP3CBP16298 524 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 CD96P40200 585 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 RAD52P43351 418 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 SEC61A1P61619 476 aaKnown RBP13.97□□□□□ -0.17
C9orf3-204ENST00000424143 CAMK1Q14012 370 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 FGL2Q14314 439 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 TOMM20Q15388 145 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 ZNF141Q15928 474 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 SLC36A1Q7Z2H8 476 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 IQCF2Q8IXL9 164 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 SPPL3Q8TCT6 385 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 LIPHQ8WWY8 451 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 LCN9Q8WX39 176 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 ING5Q8WYH8 240 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 ZMYND19Q96E35 227 aaPredicted RBP13.97□□□□□ -0.17
C9orf3-204ENST00000424143 ALX4Q9H161 411 aaPredicted RBP13.97□□□□□ -0.17
C9orf3-204ENST00000424143 OR10A4Q9H209 315 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 TRPV4Q9HBA0 871 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 MKKSQ9NPJ1 570 aaPredicted RBP13.97□□□□□ -0.17
C9orf3-204ENST00000424143 DNAJB12Q9NXW2 375 aaKnown RBP13.97□□□□□ -0.17
C9orf3-204ENST00000424143 FBXL4Q9UKA2 621 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 PILRAQ9UKJ1 303 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 SCML1Q9UN30 329 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 SLC6A5Q9Y345 797 aa13.97□□□□□ -0.17
C9orf3-204ENST00000424143 OR52A4PA6NMU1 304 aa13.96□□□□□ -0.17
C9orf3-204ENST00000424143 TTLL8A6PVC2 850 aa13.96□□□□□ -0.17
C9orf3-204ENST00000424143 GLSO94925 669 aaPredicted RBP13.96□□□□□ -0.17
C9orf3-204ENST00000424143 NMBP08949 121 aa13.96□□□□□ -0.17
C9orf3-204ENST00000424143 HIST1H1CP16403 213 aaKnown RBP13.96□□□□□ -0.17
C9orf3-204ENST00000424143 EPCAMP16422 314 aa13.96□□□□□ -0.17
C9orf3-204ENST00000424143 S100A11P31949 105 aa13.96□□□□□ -0.17
C9orf3-204ENST00000424143 NUP62P37198 522 aaPredicted RBP13.96□□□□□ -0.17
C9orf3-204ENST00000424143 SIM1P81133 766 aaPredicted RBP13.96□□□□□ -0.17
C9orf3-204ENST00000424143 SGCGQ13326 291 aa13.96□□□□□ -0.17
C9orf3-204ENST00000424143 HTR4Q13639 388 aa13.96□□□□□ -0.17
C9orf3-204ENST00000424143 HLXQ14774 488 aaPredicted RBP13.96□□□□□ -0.17
C9orf3-204ENST00000424143 TFAP2EQ6VUC0 442 aa13.96□□□□□ -0.17
C9orf3-204ENST00000424143 ESPNLQ6ZVH7 1005 aa13.96□□□□□ -0.17
C9orf3-204ENST00000424143 FCRLAQ7L513 359 aa13.96□□□□□ -0.17
C9orf3-204ENST00000424143 MOSPD2Q8NHP6 518 aa13.96□□□□□ -0.17
C9orf3-204ENST00000424143 ARMC5Q96C12 935 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms