RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 CBFBQ13951 182 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 TBCEQ15813 527 aaPredicted RBP8.11□□□□□ -1.11
HPS4-204ENST00000422379 TIGD3Q6B0B8 471 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 INO80CQ6PI98 192 aaPredicted RBP8.11□□□□□ -1.11
HPS4-204ENST00000422379 ZNF730Q6ZMV8 503 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 ADGRG3Q86Y34 549 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 KIF18BQ86Y91 864 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 ANKRD13BQ86YJ7 626 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 PLCZ1Q86YW0 608 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 CFAP46Q8IYW2 2715 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 DND1Q8IYX4 353 aaKnown RBP8.11□□□□□ -1.11
HPS4-204ENST00000422379 IQCF1Q8N6M8 205 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 LRRC17Q8N6Y2 441 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 TNRC6AQ8NDV7 1962 aaKnown RBP8.11□□□□□ -1.11
HPS4-204ENST00000422379 TOR1AIP2Q8NFQ8 470 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 RNF217Q8TC41 542 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 TMEM239Q8WW34 195 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 YIPF6Q96EC8 236 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 C1GALT1C1Q96EU7 318 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 JSRP1Q96MG2 331 aaPredicted RBP8.11□□□□□ -1.11
HPS4-204ENST00000422379 IL4I1Q96RQ9 567 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 POLR2J2Q9GZM3 115 aaKnown RBP8.11□□□□□ -1.11
HPS4-204ENST00000422379 ENKD1Q9H0I2 346 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 UBQLN3Q9H347 655 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 ANKRD19PQ9H560 264 aa8.11□□□□□ -1.11
HPS4-204ENST00000422379 SH3D21A4FU49 640 aa8.1□□□□□ -1.11
HPS4-204ENST00000422379 ENTPD6O75354 484 aa8.1□□□□□ -1.11
HPS4-204ENST00000422379 GABARAPO95166 117 aa8.1□□□□□ -1.11
HPS4-204ENST00000422379 CELA3AP09093 270 aa8.1□□□□□ -1.11
HPS4-204ENST00000422379 ZNF182P17025 639 aaPredicted RBP8.1□□□□□ -1.11
HPS4-204ENST00000422379 PGCP20142 388 aa8.1□□□□□ -1.11
HPS4-204ENST00000422379 SHC1P29353 583 aa8.1□□□□□ -1.11
HPS4-204ENST00000422379 TNFSF10P50591 281 aa8.1□□□□□ -1.11
HPS4-204ENST00000422379 DLX5P56178 289 aa8.1□□□□□ -1.11
HPS4-204ENST00000422379 FXYD6P3P58550 94 aa8.1□□□□□ -1.11
HPS4-204ENST00000422379 SNRPGP62308 76 aaKnown RBP8.1□□□□□ -1.11
HPS4-204ENST00000422379 LTBQ06643 244 aa8.1□□□□□ -1.11
HPS4-204ENST00000422379 ST3GAL4Q11206 333 aa8.1□□□□□ -1.11
HPS4-204ENST00000422379 CTF1Q16619 201 aa8.1□□□□□ -1.11
HPS4-204ENST00000422379 TMEM44Q2T9K0 475 aa8.1□□□□□ -1.11
HPS4-204ENST00000422379 TUSC1Q2TAM9 212 aa8.1□□□□□ -1.11
HPS4-204ENST00000422379 RNFT1Q5M7Z0 435 aa8.1□□□□□ -1.11
HPS4-204ENST00000422379 TMEM201Q5SNT2 666 aa8.1□□□□□ -1.11
HPS4-204ENST00000422379 UBE2UQ5VVX9 321 aa8.1□□□□□ -1.11
HPS4-204ENST00000422379 CASP12Q6UXS9 341 aa8.1□□□□□ -1.11
HPS4-204ENST00000422379 SULF2Q8IWU5 870 aa8.1□□□□□ -1.11
HPS4-204ENST00000422379 GPALPP1Q8IXQ4 340 aa8.1□□□□□ -1.11
HPS4-204ENST00000422379 OR2M7Q8NG81 312 aa8.1□□□□□ -1.11
HPS4-204ENST00000422379 ZNF563Q8TA94 476 aa8.1□□□□□ -1.11
HPS4-204ENST00000422379 GNPDA2Q8TDQ7 276 aa8.1□□□□□ -1.11
HPS4-204ENST00000422379 FCGR1BQ92637 280 aa8.1□□□□□ -1.11
HPS4-204ENST00000422379 HAS2Q92819 552 aa8.1□□□□□ -1.11
HPS4-204ENST00000422379 KTI12Q96EK9 354 aaPredicted RBP8.1□□□□□ -1.11
HPS4-204ENST00000422379 TMEM41AQ96HV5 264 aa8.1□□□□□ -1.11
HPS4-204ENST00000422379 PLA2G12AQ9BZM1 189 aa8.1□□□□□ -1.11
HPS4-204ENST00000422379 OR11A1Q9GZK7 315 aa8.1□□□□□ -1.11
HPS4-204ENST00000422379 EGLN3Q9H6Z9 239 aa8.1□□□□□ -1.11
HPS4-204ENST00000422379 TIMMDC1Q9NPL8 285 aa8.1□□□□□ -1.11
HPS4-204ENST00000422379 SACM1LQ9NTJ5 587 aa8.1□□□□□ -1.11
HPS4-204ENST00000422379 CLN6Q9NWW5 311 aa8.1□□□□□ -1.11
HPS4-204ENST00000422379 TAS2R10Q9NYW0 307 aa8.1□□□□□ -1.11
HPS4-204ENST00000422379 RELNP78509 3460 aa8.1□□□□□ -1.11
HPS4-204ENST00000422379 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 TMEM72A0PK05 275 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 NME2P1O60361 137 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 NPIPB7O75200 414 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 OPN1LWP04000 364 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 P04436 131 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 SP1P08047 785 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 ADRA2AP08913 450 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 ADORA3P0DMS8 318 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 GSTM3P21266 225 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 CNR1P21554 472 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 NME2P22392 152 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 IFNGR2P38484 337 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 SLC15A1P46059 708 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 GIPRP48546 466 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 SUMO3P55854 103 aaPredicted RBP8.09□□□□□ -1.11
HPS4-204ENST00000422379 B3GALT5-AS1P59052 145 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 COPZ1P61923 177 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 CDK5Q00535 292 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 TSPAN31Q12999 210 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 GINS1Q14691 196 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 SPCS2Q15005 226 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 GXYLT1Q4G148 440 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 SLC25A53Q5H9E4 307 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 ACSM5Q6NUN0 579 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 UNQ6494/PRO21346Q6UXR6 183 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 SLC46A3Q7Z3Q1 461 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 GALNTL5Q7Z4T8 443 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 STX19Q8N4C7 294 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 TCEANCQ8N8B7 351 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 OR8D4Q8NGM9 314 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 OR8J1Q8NGP2 316 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 PIGXQ8TBF5 258 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 DNAJA4Q8WW22 397 aaPredicted RBP8.09□□□□□ -1.11
HPS4-204ENST00000422379 SCMH1Q96GD3 660 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 MOGAT1Q96PD6 335 aa8.09□□□□□ -1.11
HPS4-204ENST00000422379 SMAD5Q99717 465 aaKnown RBP8.09□□□□□ -1.11
HPS4-204ENST00000422379 PTDSS2Q9BVG9 487 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms