RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 SORDQ00796 357 aa16.59■□□□□ 0.25
PTCD3-204ENST00000418628 RASGEF1BQ0VAM2 473 aa16.59■□□□□ 0.25
PTCD3-204ENST00000418628 SP5Q6BEB4 398 aaPredicted RBP16.59■□□□□ 0.25
PTCD3-204ENST00000418628 ZNF474Q6S9Z5 364 aaPredicted RBP16.59■□□□□ 0.25
PTCD3-204ENST00000418628 RINLQ6ZS11 566 aa16.59■□□□□ 0.25
PTCD3-204ENST00000418628 TSEN54Q7Z6J9 526 aaKnown RBP16.59■□□□□ 0.25
PTCD3-204ENST00000418628 TUSC5Q8IXB3 177 aa16.59■□□□□ 0.25
PTCD3-204ENST00000418628 DMRTC2Q8IXT2 367 aaPredicted RBP16.59■□□□□ 0.25
PTCD3-204ENST00000418628 PIGXQ8TBF5 258 aa16.59■□□□□ 0.25
PTCD3-204ENST00000418628 LZICQ8WZA0 190 aa16.59■□□□□ 0.25
PTCD3-204ENST00000418628 ZHX1-C8orf76Q96EF9 292 aa16.59■□□□□ 0.25
PTCD3-204ENST00000418628 HSH2DQ96JZ2 352 aa16.59■□□□□ 0.25
PTCD3-204ENST00000418628 ZNF300Q96RE9 604 aaPredicted RBP16.59■□□□□ 0.25
PTCD3-204ENST00000418628 DCAF13Q9NV06 445 aaKnown RBP16.59■□□□□ 0.25
PTCD3-204ENST00000418628 GALNT8Q9NY28 637 aa16.59■□□□□ 0.25
PTCD3-204ENST00000418628 TAS2R1Q9NYW7 299 aa16.59■□□□□ 0.25
PTCD3-204ENST00000418628 MAGEL2Q9UJ55 1249 aa16.59■□□□□ 0.25
PTCD3-204ENST00000418628 ARPC2O15144 300 aa16.58■□□□□ 0.24
PTCD3-204ENST00000418628 OR5F1O95221 314 aa16.58■□□□□ 0.24
PTCD3-204ENST00000418628 AHSA1O95433 338 aa16.58■□□□□ 0.24
PTCD3-204ENST00000418628 PLGP00747 810 aaPredicted RBP16.58■□□□□ 0.24
PTCD3-204ENST00000418628 SEMG1P04279 462 aa16.58■□□□□ 0.24
PTCD3-204ENST00000418628 YES1P07947 543 aa16.58■□□□□ 0.24
PTCD3-204ENST00000418628 CTBP2P56545 445 aa16.58■□□□□ 0.24
PTCD3-204ENST00000418628 OR2B6P58173 313 aa16.58■□□□□ 0.24
PTCD3-204ENST00000418628 OR7A5Q15622 319 aa16.58■□□□□ 0.24
PTCD3-204ENST00000418628 FAM69AQ5T7M9 428 aa16.58■□□□□ 0.24
PTCD3-204ENST00000418628 GLYATQ6IB77 296 aa16.58■□□□□ 0.24
PTCD3-204ENST00000418628 TFAP2EQ6VUC0 442 aa16.58■□□□□ 0.24
PTCD3-204ENST00000418628 GDF7Q7Z4P5 450 aa16.58■□□□□ 0.24
PTCD3-204ENST00000418628 GEMIN6Q8WXD5 167 aaKnown RBP16.58■□□□□ 0.24
PTCD3-204ENST00000418628 FAM162AQ96A26 154 aa16.58■□□□□ 0.24
PTCD3-204ENST00000418628 TPD52L3Q96J77 140 aa16.58■□□□□ 0.24
PTCD3-204ENST00000418628 MPP4Q96JB8 637 aa16.58■□□□□ 0.24
PTCD3-204ENST00000418628 PRRC1Q96M27 445 aa16.58■□□□□ 0.24
PTCD3-204ENST00000418628 AMBRA1Q9C0C7 1298 aa16.58■□□□□ 0.24
PTCD3-204ENST00000418628 OPN3Q9H1Y3 402 aaPredicted RBP16.58■□□□□ 0.24
PTCD3-204ENST00000418628 A4GNTQ9UNA3 340 aa16.58■□□□□ 0.24
PTCD3-204ENST00000418628 TRAV36DV7A0A075B6V5 113 aa16.57■□□□□ 0.24
PTCD3-204ENST00000418628 PRSS23O95084 383 aa16.57■□□□□ 0.24
PTCD3-204ENST00000418628 BGLAPP02818 100 aa16.57■□□□□ 0.24
PTCD3-204ENST00000418628 THRBP10828 461 aa16.57■□□□□ 0.24
PTCD3-204ENST00000418628 CCKARP32238 428 aa16.57■□□□□ 0.24
PTCD3-204ENST00000418628 MXRA7P84157 204 aa16.57■□□□□ 0.24
PTCD3-204ENST00000418628 SLC17A1Q14916 467 aa16.57■□□□□ 0.24
PTCD3-204ENST00000418628 IFI44LQ53G44 452 aa16.57■□□□□ 0.24
PTCD3-204ENST00000418628 NUFIP2Q7Z417 695 aaKnown RBP16.57■□□□□ 0.24
PTCD3-204ENST00000418628 CCDC103Q8IW40 242 aa16.57■□□□□ 0.24
PTCD3-204ENST00000418628 MCEMP1Q8IX19 187 aa16.57■□□□□ 0.24
PTCD3-204ENST00000418628 TMEM99Q8N816 258 aa16.57■□□□□ 0.24
PTCD3-204ENST00000418628 ADPRHL1Q8NDY3 354 aa16.57■□□□□ 0.24
PTCD3-204ENST00000418628 TAAR8Q969N4 342 aa16.57■□□□□ 0.24
PTCD3-204ENST00000418628 SLC41A3Q96GZ6 507 aa16.57■□□□□ 0.24
PTCD3-204ENST00000418628 RPS6KA6Q9UK32 745 aa16.57■□□□□ 0.24
PTCD3-204ENST00000418628 SLC7A7Q9UM01 511 aa16.57■□□□□ 0.24
PTCD3-204ENST00000418628 PROCRQ9UNN8 238 aa16.57■□□□□ 0.24
PTCD3-204ENST00000418628 SNX13Q9Y5W8 968 aa16.57■□□□□ 0.24
PTCD3-204ENST00000418628 RAI1Q7Z5J4 1906 aaPredicted RBP16.57■□□□□ 0.24
PTCD3-204ENST00000418628 OR2T1O43869 369 aa16.56■□□□□ 0.24
PTCD3-204ENST00000418628 AKR7A3O95154 331 aa16.56■□□□□ 0.24
PTCD3-204ENST00000418628 ZNF682O95780 498 aa16.56■□□□□ 0.24
PTCD3-204ENST00000418628 TCN1P20061 433 aaPredicted RBP16.56■□□□□ 0.24
PTCD3-204ENST00000418628 NTF4P34130 210 aa16.56■□□□□ 0.24
PTCD3-204ENST00000418628 RPS5P46782 204 aaKnown RBP16.56■□□□□ 0.24
PTCD3-204ENST00000418628 LTBQ06643 244 aa16.56■□□□□ 0.24
PTCD3-204ENST00000418628 POU4F3Q15319 338 aa16.56■□□□□ 0.24
PTCD3-204ENST00000418628 IQCCQ4KMZ1 466 aa16.56■□□□□ 0.24
PTCD3-204ENST00000418628 TMEM201Q5SNT2 666 aa16.56■□□□□ 0.24
PTCD3-204ENST00000418628 OTUD3Q5T2D3 398 aaPredicted RBP16.56■□□□□ 0.24
PTCD3-204ENST00000418628 ZNF787Q6DD87 383 aa16.56■□□□□ 0.24
PTCD3-204ENST00000418628 DEF8Q6ZN54 512 aa16.56■□□□□ 0.24
PTCD3-204ENST00000418628 LUZP2Q86TE4 346 aa16.56■□□□□ 0.24
PTCD3-204ENST00000418628 OFCC1Q8IZS5 231 aa16.56■□□□□ 0.24
PTCD3-204ENST00000418628 FAM86B1Q8N7N1 296 aa16.56■□□□□ 0.24
PTCD3-204ENST00000418628 SLC7A6OSQ96CW6 309 aaPredicted RBP16.56■□□□□ 0.24
PTCD3-204ENST00000418628 NAA11Q9BSU3 229 aaPredicted RBP16.56■□□□□ 0.24
PTCD3-204ENST00000418628 SF3B5Q9BWJ5 86 aaKnown RBP16.56■□□□□ 0.24
PTCD3-204ENST00000418628 RBM24Q9BX46 236 aaKnown RBP16.56■□□□□ 0.24
PTCD3-204ENST00000418628 TAPBPLQ9BX59 468 aa16.56■□□□□ 0.24
PTCD3-204ENST00000418628 SLC19A3Q9BZV2 496 aa16.56■□□□□ 0.24
PTCD3-204ENST00000418628 MAN2C1Q9NTJ4 1040 aa16.56■□□□□ 0.24
PTCD3-204ENST00000418628 SELENONQ9NZV5 590 aa16.56■□□□□ 0.24
PTCD3-204ENST00000418628 PRPF19Q9UMS4 504 aaKnown RBP16.56■□□□□ 0.24
PTCD3-204ENST00000418628 FLVCR1Q9Y5Y0 555 aa16.56■□□□□ 0.24
PTCD3-204ENST00000418628 NAV2Q8IVL1 2488 aa16.56■□□□□ 0.24
PTCD3-204ENST00000418628 FFAR1O14842 300 aa16.55■□□□□ 0.24
PTCD3-204ENST00000418628 SMNDC1O75940 238 aaKnown RBP eCLIP16.55■□□□□ 0.24
PTCD3-204ENST00000418628 IGF2P01344 180 aa16.55■□□□□ 0.24
PTCD3-204ENST00000418628 IFNW1P05000 195 aa16.55■□□□□ 0.24
PTCD3-204ENST00000418628 FUT4P22083 530 aa16.55■□□□□ 0.24
PTCD3-204ENST00000418628 EDNRAP25101 427 aa16.55■□□□□ 0.24
PTCD3-204ENST00000418628 MSX2P35548 267 aaPredicted RBP16.55■□□□□ 0.24
PTCD3-204ENST00000418628 PEX19P40855 299 aa16.55■□□□□ 0.24
PTCD3-204ENST00000418628 OR3A2P47893 321 aa16.55■□□□□ 0.24
PTCD3-204ENST00000418628 PIN1Q13526 163 aaPredicted RBP16.55■□□□□ 0.24
PTCD3-204ENST00000418628 MEX3BQ6ZN04 569 aaKnown RBP16.55■□□□□ 0.24
PTCD3-204ENST00000418628 P3H2Q8IVL5 708 aa16.55■□□□□ 0.24
PTCD3-204ENST00000418628 ZNF610Q8N9Z0 462 aa16.55■□□□□ 0.24
PTCD3-204ENST00000418628 TMEM45BQ96B21 275 aa16.55■□□□□ 0.24
PTCD3-204ENST00000418628 LRRC46Q96FV0 321 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms