RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 SLC35E2P0CK97 266 aa13.27□□□□□ -0.29
HDAC9-208ENST00000417496 GDNFP39905 211 aa13.27□□□□□ -0.29
HDAC9-208ENST00000417496 ZNF267Q14586 743 aaPredicted RBP13.27□□□□□ -0.29
HDAC9-208ENST00000417496 ZBTB37Q5TC79 503 aa13.27□□□□□ -0.29
HDAC9-208ENST00000417496 FAAP20Q6NZ36 180 aa13.27□□□□□ -0.29
HDAC9-208ENST00000417496 ULK3Q6PHR2 472 aa13.27□□□□□ -0.29
HDAC9-208ENST00000417496 RFPL4BQ6ZWI9 263 aa13.27□□□□□ -0.29
HDAC9-208ENST00000417496 ZNF767PQ75MW2 155 aa13.27□□□□□ -0.29
HDAC9-208ENST00000417496 OR8H3Q8N146 312 aa13.27□□□□□ -0.29
HDAC9-208ENST00000417496 METTL27Q8N6F8 245 aaPredicted RBP13.27□□□□□ -0.29
HDAC9-208ENST00000417496 OR13H1Q8NG92 308 aa13.27□□□□□ -0.29
HDAC9-208ENST00000417496 SLC2A12Q8TD20 617 aa13.27□□□□□ -0.29
HDAC9-208ENST00000417496 SLC37A2Q8TED4 501 aa13.27□□□□□ -0.29
HDAC9-208ENST00000417496 RBM18Q96H35 190 aaKnown RBP13.27□□□□□ -0.29
HDAC9-208ENST00000417496 TRIM2Q9C040 744 aa13.27□□□□□ -0.29
HDAC9-208ENST00000417496 RPS6KB2Q9UBS0 482 aa13.27□□□□□ -0.29
HDAC9-208ENST00000417496 ICAM5Q9UMF0 924 aa13.27□□□□□ -0.29
HDAC9-208ENST00000417496 TP53BP1Q12888 1972 aaPredicted RBP13.27□□□□□ -0.29
HDAC9-208ENST00000417496 GPR171O14626 319 aa13.27□□□□□ -0.29
HDAC9-208ENST00000417496 SSNA1O43805 119 aa13.27□□□□□ -0.29
HDAC9-208ENST00000417496 ARL6IP5O75915 188 aa13.27□□□□□ -0.29
HDAC9-208ENST00000417496 AK1P00568 194 aa13.27□□□□□ -0.29
HDAC9-208ENST00000417496 ANXA3P12429 323 aa13.27□□□□□ -0.29
HDAC9-208ENST00000417496 SPI1P17947 270 aa13.27□□□□□ -0.29
HDAC9-208ENST00000417496 EN2P19622 333 aaPredicted RBP13.27□□□□□ -0.29
HDAC9-208ENST00000417496 HNRNPA2B1P22626 353 aaKnown RBP13.27□□□□□ -0.29
HDAC9-208ENST00000417496 PER3P56645 1201 aa13.27□□□□□ -0.29
HDAC9-208ENST00000417496 RPS15P62841 145 aaKnown RBP13.27□□□□□ -0.29
HDAC9-208ENST00000417496 POU4F2Q12837 409 aa13.27□□□□□ -0.29
HDAC9-208ENST00000417496 ILF3Q12906 894 aaKnown RBP eCLIP13.27□□□□□ -0.29
HDAC9-208ENST00000417496 CDONQ4KMG0 1287 aa13.27□□□□□ -0.29
HDAC9-208ENST00000417496 OTPQ5XKR4 325 aa13.27□□□□□ -0.29
HDAC9-208ENST00000417496 LINC00114Q6XXX2 140 aa13.27□□□□□ -0.29
HDAC9-208ENST00000417496 FCRLAQ7L513 359 aa13.27□□□□□ -0.29
HDAC9-208ENST00000417496 ELMOD2Q8IZ81 293 aa13.27□□□□□ -0.29
HDAC9-208ENST00000417496 LSMEM1Q8N8F7 131 aa13.27□□□□□ -0.29
HDAC9-208ENST00000417496 AVL9Q8NBF6 648 aa13.27□□□□□ -0.29
HDAC9-208ENST00000417496 MOSPD2Q8NHP6 518 aa13.27□□□□□ -0.29
HDAC9-208ENST00000417496 SGTBQ96EQ0 304 aa13.27□□□□□ -0.29
HDAC9-208ENST00000417496 NRIP3Q9NQ35 241 aa13.27□□□□□ -0.29
HDAC9-208ENST00000417496 SPATA2Q9UM82 520 aa13.27□□□□□ -0.29
HDAC9-208ENST00000417496 BAIAP2Q9UQB8 552 aa13.27□□□□□ -0.29
HDAC9-208ENST00000417496 RCE1Q9Y256 329 aa13.27□□□□□ -0.29
HDAC9-208ENST00000417496 A0A1B0GTH9 108 aa13.26□□□□□ -0.29
HDAC9-208ENST00000417496 LEUTXA8MZ59 168 aa13.26□□□□□ -0.29
HDAC9-208ENST00000417496 ZNF593O00488 134 aaPredicted RBP13.26□□□□□ -0.29
HDAC9-208ENST00000417496 GMFGO60234 142 aa13.26□□□□□ -0.29
HDAC9-208ENST00000417496 ZFPL1O95159 310 aa13.26□□□□□ -0.29
HDAC9-208ENST00000417496 APBB3O95704 486 aa13.26□□□□□ -0.29
HDAC9-208ENST00000417496 SERPINA3P01011 423 aa13.26□□□□□ -0.29
HDAC9-208ENST00000417496 MAOAP21397 527 aa13.26□□□□□ -0.29
HDAC9-208ENST00000417496 DIO1P49895 249 aa13.26□□□□□ -0.29
HDAC9-208ENST00000417496 STX4Q12846 297 aa13.26□□□□□ -0.29
HDAC9-208ENST00000417496 KLF9Q13886 244 aaPredicted RBP13.26□□□□□ -0.29
HDAC9-208ENST00000417496 FGFBP1Q14512 234 aa13.26□□□□□ -0.29
HDAC9-208ENST00000417496 ZNHIT3Q15649 155 aaPredicted RBP13.26□□□□□ -0.29
HDAC9-208ENST00000417496 TEX261Q6UWH6 196 aa13.26□□□□□ -0.29
HDAC9-208ENST00000417496 TMEM92Q6UXU6 159 aa13.26□□□□□ -0.29
HDAC9-208ENST00000417496 PARGQ86W56 976 aa13.26□□□□□ -0.29
HDAC9-208ENST00000417496 SLC22A18ASQ8N1D0 253 aa13.26□□□□□ -0.29
HDAC9-208ENST00000417496 ELSPBP1Q96BH3 223 aa13.26□□□□□ -0.29
HDAC9-208ENST00000417496 LMAN2LQ9H0V9 348 aa13.26□□□□□ -0.29
HDAC9-208ENST00000417496 MKKSQ9NPJ1 570 aaPredicted RBP13.26□□□□□ -0.29
HDAC9-208ENST00000417496 ABRACLQ9P1F3 81 aa13.26□□□□□ -0.29
HDAC9-208ENST00000417496 CAMK2AQ9UQM7 478 aa13.26□□□□□ -0.29
HDAC9-208ENST00000417496 PCDHGA9Q9Y5G4 932 aaKnown RBP13.26□□□□□ -0.29
HDAC9-208ENST00000417496 U3KQ87 197 aa13.26□□□□□ -0.29
HDAC9-208ENST00000417496 A0A0J9YY10 115 aa13.26□□□□□ -0.29
HDAC9-208ENST00000417496 CSTAP01040 98 aa13.26□□□□□ -0.29
HDAC9-208ENST00000417496 ENPP1P22413 925 aa13.26□□□□□ -0.29
HDAC9-208ENST00000417496 RPS27P42677 84 aaKnown RBP13.26□□□□□ -0.29
HDAC9-208ENST00000417496 TPMTP51580 245 aa13.26□□□□□ -0.29
HDAC9-208ENST00000417496 ACTA2P62736 377 aa13.26□□□□□ -0.29
HDAC9-208ENST00000417496 ACTG2P63267 376 aa13.26□□□□□ -0.29
HDAC9-208ENST00000417496 PITPNAQ00169 270 aa13.26□□□□□ -0.29
HDAC9-208ENST00000417496 RPL22L1Q6P5R6 122 aaKnown RBP13.26□□□□□ -0.29
HDAC9-208ENST00000417496 RNF44Q7L0R7 432 aa13.26□□□□□ -0.29
HDAC9-208ENST00000417496 PIAS4Q8N2W9 510 aaPredicted RBP13.26□□□□□ -0.29
HDAC9-208ENST00000417496 FAM109AQ8N4B1 249 aa13.26□□□□□ -0.29
HDAC9-208ENST00000417496 ZNF527Q8NB42 609 aa13.26□□□□□ -0.29
HDAC9-208ENST00000417496 ZNF680Q8NEM1 530 aa13.26□□□□□ -0.29
HDAC9-208ENST00000417496 OR14A16Q8NHC5 309 aa13.26□□□□□ -0.29
HDAC9-208ENST00000417496 RPLP0P6Q8NHW5 317 aa13.26□□□□□ -0.29
HDAC9-208ENST00000417496 ADAMTS14Q8WXS8 1223 aa13.26□□□□□ -0.29
HDAC9-208ENST00000417496 RELTQ969Z4 430 aa13.26□□□□□ -0.29
HDAC9-208ENST00000417496 Q96M85 177 aa13.26□□□□□ -0.29
HDAC9-208ENST00000417496 VSTM2LQ96N03 204 aa13.26□□□□□ -0.29
HDAC9-208ENST00000417496 TRAF4Q9BUZ4 470 aaPredicted RBP13.26□□□□□ -0.29
HDAC9-208ENST00000417496 OR10A4Q9H209 315 aa13.26□□□□□ -0.29
HDAC9-208ENST00000417496 FBXL21Q9UKT6 434 aa13.26□□□□□ -0.29
HDAC9-208ENST00000417496 RBM34P42696 430 aaKnown RBP13.25□□□□□ -0.29
HDAC9-208ENST00000417496 CDKN2AP42771 156 aaKnown RBP13.25□□□□□ -0.29
HDAC9-208ENST00000417496 SELENOPP49908 381 aa13.25□□□□□ -0.29
HDAC9-208ENST00000417496 RAB38P57729 211 aa13.25□□□□□ -0.29
HDAC9-208ENST00000417496 ZP1P60852 638 aa13.25□□□□□ -0.29
HDAC9-208ENST00000417496 C19orf57Q0VDD7 668 aa13.25□□□□□ -0.29
HDAC9-208ENST00000417496 LGALSLQ3ZCW2 172 aaPredicted RBP13.25□□□□□ -0.29
HDAC9-208ENST00000417496 FAM199XQ6PEV8 388 aaPredicted RBP13.25□□□□□ -0.29
HDAC9-208ENST00000417496 SYS1Q8N2H4 156 aa13.25□□□□□ -0.29
HDAC9-208ENST00000417496 OR52I2Q8NH67 350 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms