RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 ACKR1Q16570 336 aa18.25■□□□□ 0.51
PTPRU-203ENST00000415600 ARHGAP11BQ3KRB8 267 aa18.25■□□□□ 0.51
PTPRU-203ENST00000415600 ZNF550Q7Z398 422 aa18.25■□□□□ 0.51
PTPRU-203ENST00000415600 SLC30A8Q8IWU4 369 aa18.25■□□□□ 0.51
PTPRU-203ENST00000415600 RNF128Q8TEB7 428 aa18.25■□□□□ 0.51
PTPRU-203ENST00000415600 MAL2Q969L2 176 aa18.25■□□□□ 0.51
PTPRU-203ENST00000415600 NR1H4Q96RI1 486 aaPredicted RBP18.25■□□□□ 0.51
PTPRU-203ENST00000415600 CCL19Q99731 98 aa18.25■□□□□ 0.51
PTPRU-203ENST00000415600 UBTD1Q9HAC8 227 aa18.25■□□□□ 0.51
PTPRU-203ENST00000415600 NTN4Q9HB63 628 aa18.25■□□□□ 0.51
PTPRU-203ENST00000415600 OAZ3Q9UMX2 235 aa18.25■□□□□ 0.51
PTPRU-203ENST00000415600 KCNE3Q9Y6H6 103 aa18.25■□□□□ 0.51
PTPRU-203ENST00000415600 SOCS2O14508 198 aa18.25■□□□□ 0.51
PTPRU-203ENST00000415600 ZNF682O95780 498 aa18.25■□□□□ 0.51
PTPRU-203ENST00000415600 SEMG1P04279 462 aa18.25■□□□□ 0.51
PTPRU-203ENST00000415600 ANXA11P50995 505 aaKnown RBP18.25■□□□□ 0.51
PTPRU-203ENST00000415600 RPS26P62854 115 aaKnown RBP18.25■□□□□ 0.51
PTPRU-203ENST00000415600 NKX6-1P78426 367 aaPredicted RBP18.25■□□□□ 0.51
PTPRU-203ENST00000415600 SCARB2Q14108 478 aa18.25■□□□□ 0.51
PTPRU-203ENST00000415600 NRF1Q16656 503 aa18.25■□□□□ 0.51
PTPRU-203ENST00000415600 PDZK1Q5T2W1 519 aa18.25■□□□□ 0.51
PTPRU-203ENST00000415600 C3orf33Q6P1S2 294 aa18.25■□□□□ 0.51
PTPRU-203ENST00000415600 CCDC80Q76M96 950 aa18.25■□□□□ 0.51
PTPRU-203ENST00000415600 FCRLAQ7L513 359 aa18.25■□□□□ 0.51
PTPRU-203ENST00000415600 LRRC75A-AS1Q8N1F1 130 aa18.25■□□□□ 0.51
PTPRU-203ENST00000415600 STEAP2Q8NFT2 490 aa18.25■□□□□ 0.51
PTPRU-203ENST00000415600 MIPOL1Q8TD10 442 aa18.25■□□□□ 0.51
PTPRU-203ENST00000415600 ST8SIA1Q92185 356 aa18.25■□□□□ 0.51
PTPRU-203ENST00000415600 USB1Q9BQ65 265 aaKnown RBP18.25■□□□□ 0.51
PTPRU-203ENST00000415600 LAT2Q9GZY6 243 aa18.25■□□□□ 0.51
PTPRU-203ENST00000415600 NGBQ9NPG2 151 aa18.25■□□□□ 0.51
PTPRU-203ENST00000415600 KLHL9Q9P2J3 617 aa18.25■□□□□ 0.51
PTPRU-203ENST00000415600 KLHL13Q9P2N7 655 aa18.25■□□□□ 0.51
PTPRU-203ENST00000415600 SPIN1Q9Y657 262 aaPredicted RBP18.25■□□□□ 0.51
PTPRU-203ENST00000415600 FLNAP21333 2647 aaKnown RBP18.24■□□□□ 0.51
PTPRU-203ENST00000415600 CYP7B1O75881 506 aa18.24■□□□□ 0.51
PTPRU-203ENST00000415600 CSTAP01040 98 aa18.24■□□□□ 0.51
PTPRU-203ENST00000415600 GUSBP08236 651 aa18.24■□□□□ 0.51
PTPRU-203ENST00000415600 PGCP20142 388 aa18.24■□□□□ 0.51
PTPRU-203ENST00000415600 HOXC12P31275 282 aa18.24■□□□□ 0.51
PTPRU-203ENST00000415600 MAGEA8P43361 318 aa18.24■□□□□ 0.51
PTPRU-203ENST00000415600 CASP9P55211 416 aa18.24■□□□□ 0.51
PTPRU-203ENST00000415600 TXNL4AP83876 142 aaKnown RBP18.24■□□□□ 0.51
PTPRU-203ENST00000415600 CDK6Q00534 326 aa18.24■□□□□ 0.51
PTPRU-203ENST00000415600 QPRTQ15274 297 aa18.24■□□□□ 0.51
PTPRU-203ENST00000415600 ZNF141Q15928 474 aa18.24■□□□□ 0.51
PTPRU-203ENST00000415600 SLC25A53Q5H9E4 307 aa18.24■□□□□ 0.51
PTPRU-203ENST00000415600 ANKRD34AQ69YU3 496 aa18.24■□□□□ 0.51
PTPRU-203ENST00000415600 STAC2Q6ZMT1 411 aa18.24■□□□□ 0.51
PTPRU-203ENST00000415600 CBR4Q8N4T8 237 aa18.24■□□□□ 0.51
PTPRU-203ENST00000415600 ATP6V1C2Q8NEY4 427 aa18.24■□□□□ 0.51
PTPRU-203ENST00000415600 NPAS1Q99742 590 aa18.24■□□□□ 0.51
PTPRU-203ENST00000415600 ZNF350Q9GZX5 532 aa18.24■□□□□ 0.51
PTPRU-203ENST00000415600 C12orf49Q9H741 205 aa18.24■□□□□ 0.51
PTPRU-203ENST00000415600 SLC35A3Q9Y2D2 325 aa18.24■□□□□ 0.51
PTPRU-203ENST00000415600 GCM2O75603 506 aaPredicted RBP18.23■□□□□ 0.51
PTPRU-203ENST00000415600 CST1P01037 141 aa18.23■□□□□ 0.51
PTPRU-203ENST00000415600 PSMB1P20618 241 aaKnown RBP18.23■□□□□ 0.51
PTPRU-203ENST00000415600 KHKP50053 298 aa18.23■□□□□ 0.51
PTPRU-203ENST00000415600 CRYBA2P53672 197 aa18.23■□□□□ 0.51
PTPRU-203ENST00000415600 RAC3P60763 192 aa18.23■□□□□ 0.51
PTPRU-203ENST00000415600 NFKBIDQ8NI38 313 aa18.23■□□□□ 0.51
PTPRU-203ENST00000415600 ROBO4Q8WZ75 1007 aa18.23■□□□□ 0.51
PTPRU-203ENST00000415600 ACTR6Q9GZN1 396 aa18.23■□□□□ 0.51
PTPRU-203ENST00000415600 ADPRHL2Q9NX46 363 aa18.23■□□□□ 0.51
PTPRU-203ENST00000415600 ANGPT4Q9Y264 503 aa18.23■□□□□ 0.51
PTPRU-203ENST00000415600 WDR45Q9Y484 360 aa18.23■□□□□ 0.51
PTPRU-203ENST00000415600 A0A1W2PPR1 153 aa18.22■□□□□ 0.51
PTPRU-203ENST00000415600 FAM171A2A8MVW0 826 aa18.22■□□□□ 0.51
PTPRU-203ENST00000415600 PDLIM1O00151 329 aa18.22■□□□□ 0.51
PTPRU-203ENST00000415600 YES1P07947 543 aa18.22■□□□□ 0.51
PTPRU-203ENST00000415600 RNF144AP50876 292 aaPredicted RBP18.22■□□□□ 0.51
PTPRU-203ENST00000415600 CYBRD1Q53TN4 286 aa18.22■□□□□ 0.51
PTPRU-203ENST00000415600 BIVMQ86UB2 503 aa18.22■□□□□ 0.51
PTPRU-203ENST00000415600 ZDHHC21Q8IVQ6 265 aa18.22■□□□□ 0.51
PTPRU-203ENST00000415600 ABHD3Q8WU67 409 aa18.22■□□□□ 0.51
PTPRU-203ENST00000415600 SLC25A43Q8WUT9 341 aaPredicted RBP18.22■□□□□ 0.51
PTPRU-203ENST00000415600 XAGE5Q8WWM1 108 aa18.22■□□□□ 0.51
PTPRU-203ENST00000415600 OR51I1Q9H343 314 aa18.22■□□□□ 0.51
PTPRU-203ENST00000415600 A4GALTQ9NPC4 353 aa18.22■□□□□ 0.51
PTPRU-203ENST00000415600 IL1RAPQ9NPH3 570 aa18.22■□□□□ 0.51
PTPRU-203ENST00000415600 MKLN1Q9UL63 735 aa18.22■□□□□ 0.51
PTPRU-203ENST00000415600 OIP5O43482 229 aa18.21■□□□□ 0.51
PTPRU-203ENST00000415600 ZNF23P17027 643 aa18.21■□□□□ 0.51
PTPRU-203ENST00000415600 IL32P24001 234 aa18.21■□□□□ 0.51
PTPRU-203ENST00000415600 FKBP2P26885 142 aaKnown RBP18.21■□□□□ 0.51
PTPRU-203ENST00000415600 PCBP3P57721 371 aaKnown RBP18.21■□□□□ 0.51
PTPRU-203ENST00000415600 CSNK2A1P68400 391 aaPredicted RBP18.21■□□□□ 0.51
PTPRU-203ENST00000415600 WFDC11Q8NEX6 87 aa18.21■□□□□ 0.51
PTPRU-203ENST00000415600 HSH2DQ96JZ2 352 aa18.21■□□□□ 0.51
PTPRU-203ENST00000415600 THUMPD1Q9NXG2 353 aaKnown RBP18.21■□□□□ 0.51
PTPRU-203ENST00000415600 ETV2O00321 342 aaPredicted RBP18.21■□□□□ 0.51
PTPRU-203ENST00000415600 SIAH2O43255 324 aa18.21■□□□□ 0.51
PTPRU-203ENST00000415600 TMCC2O75069 709 aa18.21■□□□□ 0.51
PTPRU-203ENST00000415600 NTN1O95631 604 aa18.21■□□□□ 0.51
PTPRU-203ENST00000415600 UBTFL6P0CB48 400 aaPredicted RBP18.21■□□□□ 0.51
PTPRU-203ENST00000415600 OR12D1P0DN82 309 aa18.21■□□□□ 0.51
PTPRU-203ENST00000415600 ENPP1P22413 925 aa18.21■□□□□ 0.51
PTPRU-203ENST00000415600 SHC1P29353 583 aa18.21■□□□□ 0.51
PTPRU-203ENST00000415600 SELENOWP63302 87 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms