RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 CASP8Q14790 479 aa16.85■□□□□ 0.29
UBXN4-202ENST00000415164 MST1LQ2TV78 715 aa16.85■□□□□ 0.29
UBXN4-202ENST00000415164 MRPL2Q5T653 305 aaKnown RBP16.85■□□□□ 0.29
UBXN4-202ENST00000415164 TMEM225Q6GV28 225 aa16.85■□□□□ 0.29
UBXN4-202ENST00000415164 CMIPQ8IY22 773 aa16.85■□□□□ 0.29
UBXN4-202ENST00000415164 TMEM45BQ96B21 275 aa16.85■□□□□ 0.29
UBXN4-202ENST00000415164 TRNT1Q96Q11 434 aaKnown RBP16.85■□□□□ 0.29
UBXN4-202ENST00000415164 SLC38A2Q96QD8 506 aa16.85■□□□□ 0.29
UBXN4-202ENST00000415164 SLC38A1Q9H2H9 487 aa16.85■□□□□ 0.29
UBXN4-202ENST00000415164 A0A096LPE4 126 aa16.84■□□□□ 0.29
UBXN4-202ENST00000415164 A0A1W2PPZ6 126 aa16.84■□□□□ 0.29
UBXN4-202ENST00000415164 AGAP5A6NIR3 686 aa16.84■□□□□ 0.29
UBXN4-202ENST00000415164 VWC2LB2RUY7 222 aa16.84■□□□□ 0.29
UBXN4-202ENST00000415164 ZNF587BE7ETH6 402 aa16.84■□□□□ 0.29
UBXN4-202ENST00000415164 E9PBE3 544 aa16.84■□□□□ 0.29
UBXN4-202ENST00000415164 GSNP06396 782 aa16.84■□□□□ 0.29
UBXN4-202ENST00000415164 OR4A8P0C604 315 aa16.84■□□□□ 0.29
UBXN4-202ENST00000415164 ANXA11P50995 505 aaKnown RBP16.84■□□□□ 0.29
UBXN4-202ENST00000415164 ABCE1P61221 599 aaKnown RBP16.84■□□□□ 0.29
UBXN4-202ENST00000415164 EPS8Q12929 822 aa16.84■□□□□ 0.29
UBXN4-202ENST00000415164 TBRG1Q3YBR2 411 aa16.84■□□□□ 0.29
UBXN4-202ENST00000415164 NIPAL3Q6P499 406 aa16.84■□□□□ 0.29
UBXN4-202ENST00000415164 ZNF621Q6ZSS3 439 aa16.84■□□□□ 0.29
UBXN4-202ENST00000415164 TRIML2Q8N7C3 387 aa16.84■□□□□ 0.29
UBXN4-202ENST00000415164 TESCQ96BS2 214 aa16.84■□□□□ 0.29
UBXN4-202ENST00000415164 PANX1Q96RD7 426 aa16.84■□□□□ 0.29
UBXN4-202ENST00000415164 NUF2Q9BZD4 464 aa16.84■□□□□ 0.29
UBXN4-202ENST00000415164 BPESC1Q9GZL8 116 aa16.84■□□□□ 0.29
UBXN4-202ENST00000415164 CA10Q9NS85 328 aa16.84■□□□□ 0.29
UBXN4-202ENST00000415164 LOC390937A0A1W2PQ73 354 aa16.83■□□□□ 0.28
UBXN4-202ENST00000415164 CCDC154A6NI56 674 aa16.83■□□□□ 0.28
UBXN4-202ENST00000415164 LIPT2A6NK58 231 aa16.83■□□□□ 0.28
UBXN4-202ENST00000415164 AQP7P3A6NL99 342 aa16.83■□□□□ 0.28
UBXN4-202ENST00000415164 NR5A2O00482 541 aa16.83■□□□□ 0.28
UBXN4-202ENST00000415164 SERPINE1P05121 402 aa16.83■□□□□ 0.28
UBXN4-202ENST00000415164 LBPP18428 481 aa16.83■□□□□ 0.28
UBXN4-202ENST00000415164 SELENOPP49908 381 aa16.83■□□□□ 0.28
UBXN4-202ENST00000415164 LRRC74BQ6ZQY2 392 aa16.83■□□□□ 0.28
UBXN4-202ENST00000415164 ZIC4Q8N9L1 334 aa16.83■□□□□ 0.28
UBXN4-202ENST00000415164 OR1K1Q8NGR3 316 aa16.83■□□□□ 0.28
UBXN4-202ENST00000415164 ZIM3Q96PE6 472 aa16.83■□□□□ 0.28
UBXN4-202ENST00000415164 SF3B5Q9BWJ5 86 aaKnown RBP16.83■□□□□ 0.28
UBXN4-202ENST00000415164 MTHFD2LQ9H903 347 aaPredicted RBP16.83■□□□□ 0.28
UBXN4-202ENST00000415164 RLIMQ9NVW2 624 aa16.83■□□□□ 0.28
UBXN4-202ENST00000415164 LRP5LA4QPB2 252 aa16.82■□□□□ 0.28
UBXN4-202ENST00000415164 B9A039 149 aa16.82■□□□□ 0.28
UBXN4-202ENST00000415164 DBIP07108 87 aaKnown RBP16.82■□□□□ 0.28
UBXN4-202ENST00000415164 NCF2P19878 526 aaPredicted RBP16.82■□□□□ 0.28
UBXN4-202ENST00000415164 CDKN2CP42773 168 aa16.82■□□□□ 0.28
UBXN4-202ENST00000415164 RPL14P50914 215 aaKnown RBP16.82■□□□□ 0.28
UBXN4-202ENST00000415164 COPZ1P61923 177 aa16.82■□□□□ 0.28
UBXN4-202ENST00000415164 DPY19L1Q2PZI1 675 aa16.82■□□□□ 0.28
UBXN4-202ENST00000415164 CR1LQ2VPA4 569 aa16.82■□□□□ 0.28
UBXN4-202ENST00000415164 COX20Q5RI15 118 aa16.82■□□□□ 0.28
UBXN4-202ENST00000415164 VRK2Q86Y07 508 aa16.82■□□□□ 0.28
UBXN4-202ENST00000415164 PEX5LQ8IYB4 626 aa16.82■□□□□ 0.28
UBXN4-202ENST00000415164 CCDC115Q96NT0 180 aa16.82■□□□□ 0.28
UBXN4-202ENST00000415164 MYOZ1Q9NP98 299 aaPredicted RBP16.82■□□□□ 0.28
UBXN4-202ENST00000415164 BTNL2Q9UIR0 455 aa16.82■□□□□ 0.28
UBXN4-202ENST00000415164 RAP2CQ9Y3L5 183 aa16.82■□□□□ 0.28
UBXN4-202ENST00000415164 HEATR1Q9H583 2144 aaKnown RBP16.82■□□□□ 0.28
UBXN4-202ENST00000415164 TYROBPO43914 113 aa16.81■□□□□ 0.28
UBXN4-202ENST00000415164 ZNF23P17027 643 aa16.81■□□□□ 0.28
UBXN4-202ENST00000415164 SRP14P37108 136 aaKnown RBP16.81■□□□□ 0.28
UBXN4-202ENST00000415164 ETV4P43268 484 aa16.81■□□□□ 0.28
UBXN4-202ENST00000415164 SLC1A6P48664 564 aa16.81■□□□□ 0.28
UBXN4-202ENST00000415164 MAP2K6P52564 334 aa16.81■□□□□ 0.28
UBXN4-202ENST00000415164 UFM1P61960 85 aa16.81■□□□□ 0.28
UBXN4-202ENST00000415164 SQLEQ14534 574 aa16.81■□□□□ 0.28
UBXN4-202ENST00000415164 ADIPOQQ15848 244 aa16.81■□□□□ 0.28
UBXN4-202ENST00000415164 PRAMEF8Q5VWM4 474 aa16.81■□□□□ 0.28
UBXN4-202ENST00000415164 PRAMEF7Q5VXH5 474 aa16.81■□□□□ 0.28
UBXN4-202ENST00000415164 LIPNQ5VXI9 398 aa16.81■□□□□ 0.28
UBXN4-202ENST00000415164 ZNF836Q6ZNA1 936 aa16.81■□□□□ 0.28
UBXN4-202ENST00000415164 ZNF440Q8IYI8 595 aa16.81■□□□□ 0.28
UBXN4-202ENST00000415164 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.81■□□□□ 0.28
UBXN4-202ENST00000415164 SLC25A36Q96CQ1 311 aa16.81■□□□□ 0.28
UBXN4-202ENST00000415164 TEX37Q96LM6 180 aa16.81■□□□□ 0.28
UBXN4-202ENST00000415164 KATNB1Q9BVA0 655 aa16.81■□□□□ 0.28
UBXN4-202ENST00000415164 ROPN1BQ9BZX4 212 aaPredicted RBP16.81■□□□□ 0.28
UBXN4-202ENST00000415164 RAB1BQ9H0U4 201 aa16.81■□□□□ 0.28
UBXN4-202ENST00000415164 SEC61A2Q9H9S3 476 aa16.81■□□□□ 0.28
UBXN4-202ENST00000415164 ROPN1Q9HAT0 212 aaPredicted RBP16.81■□□□□ 0.28
UBXN4-202ENST00000415164 OBP2BQ9NPH6 170 aa16.81■□□□□ 0.28
UBXN4-202ENST00000415164 NBEAL1Q6ZS30 2694 aa16.81■□□□□ 0.28
UBXN4-202ENST00000415164 SH3PXD2BA1X283 911 aa16.8■□□□□ 0.28
UBXN4-202ENST00000415164 UPK3AO75631 287 aa16.8■□□□□ 0.28
UBXN4-202ENST00000415164 ERCC1P07992 297 aaPredicted RBP16.8■□□□□ 0.28
UBXN4-202ENST00000415164 CECR9P0C854 216 aa16.8■□□□□ 0.28
UBXN4-202ENST00000415164 GTF2E2P29084 291 aaKnown RBP16.8■□□□□ 0.28
UBXN4-202ENST00000415164 THBS2P35442 1172 aa16.8■□□□□ 0.28
UBXN4-202ENST00000415164 NAAAQ02083 359 aa16.8■□□□□ 0.28
UBXN4-202ENST00000415164 GSTA3Q16772 222 aa16.8■□□□□ 0.28
UBXN4-202ENST00000415164 LIN52Q52LA3 116 aa16.8■□□□□ 0.28
UBXN4-202ENST00000415164 ATG16L1Q676U5 607 aa16.8■□□□□ 0.28
UBXN4-202ENST00000415164 ANKRD16Q6P6B7 361 aa16.8■□□□□ 0.28
UBXN4-202ENST00000415164 CREB3L2Q70SY1 520 aa16.8■□□□□ 0.28
UBXN4-202ENST00000415164 ZNF540Q8NDQ6 660 aa16.8■□□□□ 0.28
UBXN4-202ENST00000415164 OR52P1PQ8NH57 321 aa16.8■□□□□ 0.28
UBXN4-202ENST00000415164 OR52E6Q96RD3 313 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms