RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 HCN1O60741 890 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 CBR3O75828 277 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 NCR1O76036 304 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 ANP32DO95626 131 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 OPN1LWP04000 364 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 VIMP08670 466 aaKnown RBP4.39□□□□□ -1.71
VPS41-205ENST00000414632 IFI6P09912 130 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 PEPDP12955 493 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 ETFAP13804 333 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 HPGDP15428 266 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 PPP3CBP16298 524 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 BMP7P18075 431 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 NCF2P19878 526 aaPredicted RBP4.39□□□□□ -1.71
VPS41-205ENST00000414632 ATP6V1C1P21283 382 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 TBXA2RP21731 343 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 UQCRC2P22695 453 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 ELAVL4P26378 380 aaKnown RBP4.39□□□□□ -1.71
VPS41-205ENST00000414632 DCTP40126 519 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 CLK3P49761 638 aaKnown RBP4.39□□□□□ -1.71
VPS41-205ENST00000414632 KHKP50053 298 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 CCR4P51679 360 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 CCR9P51686 369 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 PSMD4P55036 377 aaKnown RBP4.39□□□□□ -1.71
VPS41-205ENST00000414632 TPD52P55327 224 aaPredicted RBP4.39□□□□□ -1.71
VPS41-205ENST00000414632 STX1BP61266 288 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 RPL15P61313 204 aaKnown RBP4.39□□□□□ -1.71
VPS41-205ENST00000414632 ZNF117Q03924 483 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 CRYZQ08257 329 aaKnown RBP4.39□□□□□ -1.71
VPS41-205ENST00000414632 PMPCAQ10713 525 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 FUT5Q11128 374 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 SNTA1Q13424 505 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 SYPL1Q16563 259 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 GSTA3Q16772 222 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 GPAT3Q53EU6 434 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 AGKQ53H12 422 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.39□□□□□ -1.71
VPS41-205ENST00000414632 PDZK1Q5T2W1 519 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 LCE1DQ5T752 114 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 C1orf185Q5T7R7 199 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 WLSQ5T9L3 541 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 RAET1LQ5VY80 246 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 SAXO2Q658L1 398 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 TMEM81Q6P7N7 255 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 ZCCHC12Q6PEW1 402 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 ARSKQ6UWY0 536 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 C16orf62Q7Z3J2 963 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 IFNEQ86WN2 208 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 FUNDC1Q8IVP5 155 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 ULK2Q8IYT8 1036 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 LRRC34Q8IZ02 419 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 GALNT4Q8N4A0 578 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 NATD1Q8N6N6 113 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 TMCO5AQ8N6Q1 288 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 ANKFN1Q8N957 763 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 FADS6Q8N9I5 356 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 OR2M3Q8NG83 312 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 OR10Q1Q8NGQ4 319 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 FAM110BQ8TC76 370 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 RNF138Q8WVD3 245 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 XAGE5Q8WWM1 108 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 NPIPB3Q92617 1050 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 ABTB1Q969K4 478 aaPredicted RBP4.39□□□□□ -1.71
VPS41-205ENST00000414632 MOAP1Q96BY2 351 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 SARAFQ96BY9 339 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 NTNG2Q96CW9 530 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 R3HDM4Q96D70 268 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 NEURL3Q96EH8 262 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 WDYHV1Q96HA8 205 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 SFXN2Q96NB2 322 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 STACQ99469 402 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 SDF2Q99470 211 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 TIMP4Q99727 224 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 TREX2Q9BQ50 279 aaPredicted RBP4.39□□□□□ -1.71
VPS41-205ENST00000414632 CCDC28BQ9BUN5 200 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 UCK2Q9BZX2 261 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 OR2B2Q9GZK3 357 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 TMEM185BQ9H7F4 350 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 ACKR4Q9NPB9 350 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 SDR39U1Q9NRG7 319 aaPredicted RBP4.39□□□□□ -1.71
VPS41-205ENST00000414632 DUSP22Q9NRW4 184 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 FGFR1OP2Q9NVK5 253 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 QPCTLQ9NXS2 382 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 TAS2R10Q9NYW0 307 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 BTNL2Q9UIR0 455 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 ABCG2Q9UNQ0 655 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 RNF6Q9Y252 685 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 CARD8Q9Y2G2 431 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 UBE2J1Q9Y385 318 aaPredicted RBP4.39□□□□□ -1.71
VPS41-205ENST00000414632 MPDZO75970 2070 aa4.39□□□□□ -1.71
VPS41-205ENST00000414632 INTS1Q8N201 2190 aaKnown RBP4.38□□□□□ -1.71
VPS41-205ENST00000414632 ITPR2Q14571 2701 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 ADGRG4Q8IZF6 3080 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 KRTAP23-1A1A580 65 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 OR2M5A3KFT3 312 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 TTC36A6NLP5 189 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 CLDN24A6NM45 220 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 HMGN4O00479 90 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 RFXANKO14593 260 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 BCKDKO14874 412 aa4.38□□□□□ -1.71
VPS41-205ENST00000414632 HNRNPRO43390 633 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms