RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 MOB3CQ70IA8 216 aa16■□□□□ 0.15
PHRF1-202ENST00000413872 HINT2Q9BX68 163 aa16■□□□□ 0.15
PHRF1-202ENST00000413872 QRSL1Q9H0R6 528 aaKnown RBP16■□□□□ 0.15
PHRF1-202ENST00000413872 IDSB3KWA1 339 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 ZNF814B7Z6K7 855 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 PRAF2O60831 178 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 BCAS1O75363 584 aaPredicted RBP15.99■□□□□ 0.15
PHRF1-202ENST00000413872 PRKRAO75569 313 aaKnown RBP15.99■□□□□ 0.15
PHRF1-202ENST00000413872 RAB40ALP0C0E4 278 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 DEFA5Q01523 94 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 RAB40AQ8WXH6 277 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 PRRT1Q99946 306 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 SERPINE2P07093 398 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 ZNF44P15621 663 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 CD22P20273 847 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 ZNF169Q14929 603 aaPredicted RBP15.99■□□□□ 0.15
PHRF1-202ENST00000413872 SFRP4Q6FHJ7 346 aaPredicted RBP15.99■□□□□ 0.15
PHRF1-202ENST00000413872 DNAJC22Q8N4W6 341 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 CADM4Q8NFZ8 388 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 THOC3Q96J01 351 aaKnown RBP15.99■□□□□ 0.15
PHRF1-202ENST00000413872 PAPOLGQ9BWT3 736 aaKnown RBP15.99■□□□□ 0.15
PHRF1-202ENST00000413872 NXF5Q9H1B4 397 aaKnown RBP15.99■□□□□ 0.15
PHRF1-202ENST00000413872 LMO7DNF2Z398 122 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 ZNF593O00488 134 aaPredicted RBP15.99■□□□□ 0.15
PHRF1-202ENST00000413872 WNT11O96014 354 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 IL1AP01583 271 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 THBS1P07996 1170 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 AKAIN1P0CW23 69 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 P2RX1P51575 399 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 ZNF684Q5T5D7 378 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 KIAA1211LQ6NV74 962 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 CNIH2Q6PI25 160 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 ANKRD13BQ86YJ7 626 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 PIGCQ92535 297 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 GIMAP5Q96F15 307 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 SLC17A4Q9Y2C5 497 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 D6RAR5 112 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 VAMP5O95183 116 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 MAN2A2P49641 1150 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 FAM57BQ71RH2 274 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 SPRED1Q7Z699 444 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 B3GNT8Q7Z7M8 397 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 FAM217AQ8IXS0 508 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 ZNF610Q8N9Z0 462 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 TEX19Q8NA77 164 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 ABHD11Q8NFV4 315 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 GGHQ92820 318 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 CRISPLD2Q9H0B8 497 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 METTL9Q9H1A3 318 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 WDR76Q9H967 626 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 RHBDD3Q9Y3P4 386 aa15.99■□□□□ 0.15
PHRF1-202ENST00000413872 MPPED1O15442 326 aa15.98■□□□□ 0.15
PHRF1-202ENST00000413872 LYRM1O43325 122 aa15.98■□□□□ 0.15
PHRF1-202ENST00000413872 TSPAN9O75954 239 aa15.98■□□□□ 0.15
PHRF1-202ENST00000413872 CEACAM5P06731 702 aa15.98■□□□□ 0.15
PHRF1-202ENST00000413872 CRHBPP24387 322 aa15.98■□□□□ 0.15
PHRF1-202ENST00000413872 FAM53BQ14153 422 aa15.98■□□□□ 0.15
PHRF1-202ENST00000413872 IL17RDQ8NFM7 739 aa15.98■□□□□ 0.15
PHRF1-202ENST00000413872 PKMYT1Q99640 499 aa15.98■□□□□ 0.15
PHRF1-202ENST00000413872 KLF13Q9Y2Y9 288 aaPredicted RBP15.98■□□□□ 0.15
PHRF1-202ENST00000413872 SHISA7A6NL88 538 aa15.98■□□□□ 0.15
PHRF1-202ENST00000413872 DBHP09172 617 aa15.98■□□□□ 0.15
PHRF1-202ENST00000413872 BIDP55957 195 aa15.98■□□□□ 0.15
PHRF1-202ENST00000413872 SLC35D2Q76EJ3 337 aa15.98■□□□□ 0.15
PHRF1-202ENST00000413872 GDF7Q7Z4P5 450 aa15.98■□□□□ 0.15
PHRF1-202ENST00000413872 SGCZQ96LD1 299 aa15.98■□□□□ 0.15
PHRF1-202ENST00000413872 CFHR5Q9BXR6 569 aa15.98■□□□□ 0.15
PHRF1-202ENST00000413872 SLC19A3Q9BZV2 496 aa15.98■□□□□ 0.15
PHRF1-202ENST00000413872 SLC25A18Q9H1K4 315 aa15.98■□□□□ 0.15
PHRF1-202ENST00000413872 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.98■□□□□ 0.15
PHRF1-202ENST00000413872 CTGFP29279 349 aa15.98■□□□□ 0.15
PHRF1-202ENST00000413872 MFAP5Q13361 173 aa15.98■□□□□ 0.15
PHRF1-202ENST00000413872 PLGLAQ15195 96 aa15.98■□□□□ 0.15
PHRF1-202ENST00000413872 SPTY2D1-AS1A0A0U1RR47 76 aa15.98■□□□□ 0.15
PHRF1-202ENST00000413872 M0R036 132 aa15.98■□□□□ 0.15
PHRF1-202ENST00000413872 KLK8O60259 260 aa15.98■□□□□ 0.15
PHRF1-202ENST00000413872 POU2F2P09086 479 aa15.98■□□□□ 0.15
PHRF1-202ENST00000413872 ST6GAL1P15907 406 aa15.98■□□□□ 0.15
PHRF1-202ENST00000413872 ELAVL4P26378 380 aaKnown RBP15.98■□□□□ 0.15
PHRF1-202ENST00000413872 CA5AP35218 305 aa15.98■□□□□ 0.15
PHRF1-202ENST00000413872 SPRED3Q2MJR0 410 aa15.98■□□□□ 0.15
PHRF1-202ENST00000413872 C1orf140Q5VVS0 124 aa15.98■□□□□ 0.15
PHRF1-202ENST00000413872 DHRS4L2Q6PKH6 230 aa15.98■□□□□ 0.15
PHRF1-202ENST00000413872 ZNF695Q8IW36 515 aa15.98■□□□□ 0.15
PHRF1-202ENST00000413872 SIMC1Q8NDZ2 872 aa15.98■□□□□ 0.15
PHRF1-202ENST00000413872 OR6Q1Q8NGQ2 317 aa15.98■□□□□ 0.15
PHRF1-202ENST00000413872 GOT1L1Q8NHS2 421 aaPredicted RBP15.98■□□□□ 0.15
PHRF1-202ENST00000413872 SYNPRQ8TBG9 265 aa15.98■□□□□ 0.15
PHRF1-202ENST00000413872 STT3BQ8TCJ2 826 aa15.98■□□□□ 0.15
PHRF1-202ENST00000413872 TOMM40LQ969M1 308 aa15.98■□□□□ 0.15
PHRF1-202ENST00000413872 MRPL15Q9P015 296 aaKnown RBP15.98■□□□□ 0.15
PHRF1-202ENST00000413872 ANKRD12Q6UB98 2062 aa15.97■□□□□ 0.15
PHRF1-202ENST00000413872 FUOMA2VDF0 154 aa15.97■□□□□ 0.15
PHRF1-202ENST00000413872 ADAM23O75077 832 aa15.97■□□□□ 0.15
PHRF1-202ENST00000413872 PEX14O75381 377 aa15.97■□□□□ 0.15
PHRF1-202ENST00000413872 RAB31Q13636 194 aa15.97■□□□□ 0.15
PHRF1-202ENST00000413872 SLC22A6Q4U2R8 563 aa15.97■□□□□ 0.15
PHRF1-202ENST00000413872 SLC35D3Q5M8T2 416 aa15.97■□□□□ 0.15
PHRF1-202ENST00000413872 COX20Q5RI15 118 aa15.97■□□□□ 0.15
PHRF1-202ENST00000413872 METTL11BQ5VVY1 283 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms