RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 ELAC2Q9BQ52 826 aaKnown RBP16.67■□□□□ 0.26
TRIM56-202ENST00000412507 ECSITQ9BQ95 431 aa16.67■□□□□ 0.26
TRIM56-202ENST00000412507 C12orf10Q9HB07 376 aa16.67■□□□□ 0.26
TRIM56-202ENST00000412507 GID8Q9NWU2 228 aa16.67■□□□□ 0.26
TRIM56-202ENST00000412507 USP22Q9UPT9 525 aa16.67■□□□□ 0.26
TRIM56-202ENST00000412507 FLVCR1Q9Y5Y0 555 aa16.67■□□□□ 0.26
TRIM56-202ENST00000412507 F8P00451 2351 aa16.67■□□□□ 0.26
TRIM56-202ENST00000412507 HIVEP1P15822 2718 aa16.66■□□□□ 0.26
TRIM56-202ENST00000412507 AQP7P3A6NL99 342 aa16.66■□□□□ 0.26
TRIM56-202ENST00000412507 M0R3H8 397 aa16.66■□□□□ 0.26
TRIM56-202ENST00000412507 KLF4O43474 513 aa16.66■□□□□ 0.26
TRIM56-202ENST00000412507 MRPL33O75394 65 aaKnown RBP16.66■□□□□ 0.26
TRIM56-202ENST00000412507 LYZL6O75951 148 aa16.66■□□□□ 0.26
TRIM56-202ENST00000412507 AHSA1O95433 338 aa16.66■□□□□ 0.26
TRIM56-202ENST00000412507 LGI1O95970 557 aa16.66■□□□□ 0.26
TRIM56-202ENST00000412507 DNASE1P24855 282 aa16.66■□□□□ 0.26
TRIM56-202ENST00000412507 LOXP28300 417 aaPredicted RBP16.66■□□□□ 0.26
TRIM56-202ENST00000412507 RPS5P46782 204 aaKnown RBP16.66■□□□□ 0.26
TRIM56-202ENST00000412507 ALG10BQ5I7T1 473 aa16.66■□□□□ 0.26
TRIM56-202ENST00000412507 INTS11Q5TA45 600 aaKnown RBP16.66■□□□□ 0.26
TRIM56-202ENST00000412507 ULK3Q6PHR2 472 aa16.66■□□□□ 0.26
TRIM56-202ENST00000412507 C6orf89Q6UWU4 347 aa16.66■□□□□ 0.26
TRIM56-202ENST00000412507 PAMR1Q6UXH9 720 aa16.66■□□□□ 0.26
TRIM56-202ENST00000412507 BHLHA15Q7RTS1 189 aaPredicted RBP16.66■□□□□ 0.26
TRIM56-202ENST00000412507 ALPK2Q86TB3 2170 aa16.66■□□□□ 0.26
TRIM56-202ENST00000412507 UBE2J2Q8N2K1 259 aa16.66■□□□□ 0.26
TRIM56-202ENST00000412507 GPR32P1Q8NGA4 272 aa16.66■□□□□ 0.26
TRIM56-202ENST00000412507 RNF217Q8TC41 542 aa16.66■□□□□ 0.26
TRIM56-202ENST00000412507 SLC26A7Q8TE54 656 aa16.66■□□□□ 0.26
TRIM56-202ENST00000412507 DNAJA4Q8WW22 397 aaPredicted RBP16.66■□□□□ 0.26
TRIM56-202ENST00000412507 NINJ1Q92982 152 aa16.66■□□□□ 0.26
TRIM56-202ENST00000412507 TAMM41Q96BW9 452 aa16.66■□□□□ 0.26
TRIM56-202ENST00000412507 SLC25A36Q96CQ1 311 aa16.66■□□□□ 0.26
TRIM56-202ENST00000412507 RCN3Q96D15 328 aa16.66■□□□□ 0.26
TRIM56-202ENST00000412507 KTI12Q96EK9 354 aaPredicted RBP16.66■□□□□ 0.26
TRIM56-202ENST00000412507 HS3ST6Q96QI5 342 aa16.66■□□□□ 0.26
TRIM56-202ENST00000412507 ARHGDIGQ99819 225 aa16.66■□□□□ 0.26
TRIM56-202ENST00000412507 PTDSS2Q9BVG9 487 aa16.66■□□□□ 0.26
TRIM56-202ENST00000412507 TMEM27Q9HBJ8 222 aa16.66■□□□□ 0.26
TRIM56-202ENST00000412507 ARID1AO14497 2285 aa16.65■□□□□ 0.26
TRIM56-202ENST00000412507 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.65■□□□□ 0.26
TRIM56-202ENST00000412507 CCDC22O60826 627 aa16.65■□□□□ 0.26
TRIM56-202ENST00000412507 IGHV1-2P23083 117 aa16.65■□□□□ 0.26
TRIM56-202ENST00000412507 P2RY4P51582 365 aa16.65■□□□□ 0.26
TRIM56-202ENST00000412507 ART1P52961 327 aa16.65■□□□□ 0.26
TRIM56-202ENST00000412507 TESK1Q15569 626 aa16.65■□□□□ 0.26
TRIM56-202ENST00000412507 NRF1Q16656 503 aa16.65■□□□□ 0.26
TRIM56-202ENST00000412507 FBXW9Q5XUX1 488 aa16.65■□□□□ 0.26
TRIM56-202ENST00000412507 FAM91A1Q658Y4 838 aa16.65■□□□□ 0.26
TRIM56-202ENST00000412507 CASP12Q6UXS9 341 aa16.65■□□□□ 0.26
TRIM56-202ENST00000412507 SPATA21Q7Z572 469 aa16.65■□□□□ 0.26
TRIM56-202ENST00000412507 GPAT4Q86UL3 456 aa16.65■□□□□ 0.26
TRIM56-202ENST00000412507 RANBP3LQ86VV4 465 aaPredicted RBP16.65■□□□□ 0.26
TRIM56-202ENST00000412507 P3H2Q8IVL5 708 aa16.65■□□□□ 0.26
TRIM56-202ENST00000412507 OR9K2Q8NGE7 335 aa16.65■□□□□ 0.26
TRIM56-202ENST00000412507 MFSD8Q8NHS3 518 aa16.65■□□□□ 0.26
TRIM56-202ENST00000412507 RP9Q8TA86 221 aaKnown RBP16.65■□□□□ 0.26
TRIM56-202ENST00000412507 SLC47A1Q96FL8 570 aa16.65■□□□□ 0.26
TRIM56-202ENST00000412507 ZNF583Q96ND8 569 aa16.65■□□□□ 0.26
TRIM56-202ENST00000412507 MCHR1Q99705 422 aa16.65■□□□□ 0.26
TRIM56-202ENST00000412507 FAM107BQ9H098 131 aa16.65■□□□□ 0.26
TRIM56-202ENST00000412507 EVA1AQ9H8M9 152 aa16.65■□□□□ 0.26
TRIM56-202ENST00000412507 SELENONQ9NZV5 590 aa16.65■□□□□ 0.26
TRIM56-202ENST00000412507 EDARQ9UNE0 448 aa16.65■□□□□ 0.26
TRIM56-202ENST00000412507 SLC9A8Q9Y2E8 581 aa16.65■□□□□ 0.26
TRIM56-202ENST00000412507 IGKV1D-42A0A075B6H8 117 aa16.64■□□□□ 0.25
TRIM56-202ENST00000412507 A0A0B4J2E0 115 aa16.64■□□□□ 0.25
TRIM56-202ENST00000412507 A0A1B0GX12 115 aa16.64■□□□□ 0.25
TRIM56-202ENST00000412507 FTCDNL1E5RQL4 147 aa16.64■□□□□ 0.25
TRIM56-202ENST00000412507 CNOT4O95628 575 aaKnown RBP16.64■□□□□ 0.25
TRIM56-202ENST00000412507 RAF1P04049 648 aa16.64■□□□□ 0.25
TRIM56-202ENST00000412507 C8BP07358 591 aa16.64■□□□□ 0.25
TRIM56-202ENST00000412507 PNMTP11086 282 aa16.64■□□□□ 0.25
TRIM56-202ENST00000412507 COX4I1P13073 169 aa16.64■□□□□ 0.25
TRIM56-202ENST00000412507 COX5AP20674 150 aa16.64■□□□□ 0.25
TRIM56-202ENST00000412507 CD247P20963 164 aa16.64■□□□□ 0.25
TRIM56-202ENST00000412507 CRYBA2P53672 197 aa16.64■□□□□ 0.25
TRIM56-202ENST00000412507 GYS2P54840 703 aa16.64■□□□□ 0.25
TRIM56-202ENST00000412507 TAB1Q15750 504 aa16.64■□□□□ 0.25
TRIM56-202ENST00000412507 NPTX1Q15818 432 aa16.64■□□□□ 0.25
TRIM56-202ENST00000412507 BEX5Q5H9J7 111 aa16.64■□□□□ 0.25
TRIM56-202ENST00000412507 TMEM225Q6GV28 225 aa16.64■□□□□ 0.25
TRIM56-202ENST00000412507 CCDC80Q76M96 950 aa16.64■□□□□ 0.25
TRIM56-202ENST00000412507 TREML1Q86YW5 311 aa16.64■□□□□ 0.25
TRIM56-202ENST00000412507 ZIC4Q8N9L1 334 aa16.64■□□□□ 0.25
TRIM56-202ENST00000412507 OR4D11Q8NGI4 311 aa16.64■□□□□ 0.25
TRIM56-202ENST00000412507 OR6T1Q8NGN1 323 aa16.64■□□□□ 0.25
TRIM56-202ENST00000412507 SLC38A4Q969I6 547 aa16.64■□□□□ 0.25
TRIM56-202ENST00000412507 TAAR8Q969N4 342 aa16.64■□□□□ 0.25
TRIM56-202ENST00000412507 SF3B5Q9BWJ5 86 aaKnown RBP16.64■□□□□ 0.25
TRIM56-202ENST00000412507 PARPBPQ9NWS1 579 aa16.64■□□□□ 0.25
TRIM56-202ENST00000412507 CCT8L1PA6NM43 557 aa16.63■□□□□ 0.25
TRIM56-202ENST00000412507 ATE1O95260 518 aa16.63■□□□□ 0.25
TRIM56-202ENST00000412507 PTNP21246 168 aa16.63■□□□□ 0.25
TRIM56-202ENST00000412507 CDH12P55289 794 aa16.63■□□□□ 0.25
TRIM56-202ENST00000412507 FAPQ12884 760 aa16.63■□□□□ 0.25
TRIM56-202ENST00000412507 KEAP1Q14145 624 aa16.63■□□□□ 0.25
TRIM56-202ENST00000412507 RBM45Q8IUH3 476 aaKnown RBP16.63■□□□□ 0.25
TRIM56-202ENST00000412507 ZNF433Q8N7K0 673 aaPredicted RBP16.63■□□□□ 0.25
TRIM56-202ENST00000412507 VANGL1Q8TAA9 524 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms