RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 TBRG1Q3YBR2 411 aa14.55□□□□□ -0.08
MRPL55-220ENST00000411464 ANKRD16Q6P6B7 361 aa14.55□□□□□ -0.08
MRPL55-220ENST00000411464 VHLLQ6RSH7 139 aa14.55□□□□□ -0.08
MRPL55-220ENST00000411464 RIBC1Q8N443 379 aaPredicted RBP14.55□□□□□ -0.08
MRPL55-220ENST00000411464 AKTIPQ9H8T0 292 aa14.55□□□□□ -0.08
MRPL55-220ENST00000411464 FBXO9Q9UK97 447 aaPredicted RBP14.55□□□□□ -0.08
MRPL55-220ENST00000411464 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.55□□□□□ -0.089e-7■■■■□ 24
MRPL55-220ENST00000411464 PRAMEF27A3QJZ7 478 aa14.54□□□□□ -0.08
MRPL55-220ENST00000411464 LIPT2A6NK58 231 aa14.54□□□□□ -0.08
MRPL55-220ENST00000411464 AQP7P3A6NL99 342 aa14.54□□□□□ -0.08
MRPL55-220ENST00000411464 VSTM5A8MXK1 200 aa14.54□□□□□ -0.08
MRPL55-220ENST00000411464 LGI1O95970 557 aa14.54□□□□□ -0.08
MRPL55-220ENST00000411464 ERCC1P07992 297 aaPredicted RBP14.54□□□□□ -0.08
MRPL55-220ENST00000411464 IDH3GP51553 393 aaPredicted RBP14.54□□□□□ -0.08
MRPL55-220ENST00000411464 EPS8Q12929 822 aa14.54□□□□□ -0.08
MRPL55-220ENST00000411464 CASP8Q14790 479 aa14.54□□□□□ -0.08
MRPL55-220ENST00000411464 EFNB3Q15768 340 aa14.54□□□□□ -0.08
MRPL55-220ENST00000411464 SYPL1Q16563 259 aa14.54□□□□□ -0.08
MRPL55-220ENST00000411464 GSTA3Q16772 222 aa14.54□□□□□ -0.08
MRPL55-220ENST00000411464 NUDCD3Q8IVD9 361 aa14.54□□□□□ -0.08
MRPL55-220ENST00000411464 RFLNBQ8N5W9 214 aa14.54□□□□□ -0.08
MRPL55-220ENST00000411464 ANKFN1Q8N957 763 aa14.54□□□□□ -0.08
MRPL55-220ENST00000411464 OR1K1Q8NGR3 316 aa14.54□□□□□ -0.08
MRPL55-220ENST00000411464 WDR60Q8WVS4 1066 aa14.54□□□□□ -0.08
MRPL55-220ENST00000411464 TESCQ96BS2 214 aa14.54□□□□□ -0.08
MRPL55-220ENST00000411464 TAPBPLQ9BX59 468 aa14.54□□□□□ -0.08
MRPL55-220ENST00000411464 ADAM19Q9H013 955 aa14.54□□□□□ -0.08
MRPL55-220ENST00000411464 PLK3Q9H4B4 646 aa14.54□□□□□ -0.08
MRPL55-220ENST00000411464 MOV10Q9HCE1 1003 aaKnown RBP14.54□□□□□ -0.08
MRPL55-220ENST00000411464 ADPRHL2Q9NX46 363 aa14.54□□□□□ -0.08
MRPL55-220ENST00000411464 LRP5LA4QPB2 252 aa14.53□□□□□ -0.08
MRPL55-220ENST00000411464 OR6C65A6NJZ3 312 aa14.53□□□□□ -0.08
MRPL55-220ENST00000411464 TCF21O43680 179 aa14.53□□□□□ -0.08
MRPL55-220ENST00000411464 SNUPNO95149 360 aaKnown RBP14.53□□□□□ -0.08
MRPL55-220ENST00000411464 S100A3P33764 101 aa14.53□□□□□ -0.08
MRPL55-220ENST00000411464 SRP14P37108 136 aaKnown RBP14.53□□□□□ -0.08
MRPL55-220ENST00000411464 PPOXP50336 477 aa14.53□□□□□ -0.08
MRPL55-220ENST00000411464 CHN2P52757 468 aa14.53□□□□□ -0.08
MRPL55-220ENST00000411464 CLNS1AP54105 237 aaKnown RBP14.53□□□□□ -0.08
MRPL55-220ENST00000411464 NAAAQ02083 359 aa14.53□□□□□ -0.08
MRPL55-220ENST00000411464 DPY19L1Q2PZI1 675 aa14.53□□□□□ -0.08
MRPL55-220ENST00000411464 SPANXN4Q5MJ08 99 aa14.53□□□□□ -0.08
MRPL55-220ENST00000411464 LRRC74BQ6ZQY2 392 aa14.53□□□□□ -0.08
MRPL55-220ENST00000411464 RNF130Q86XS8 419 aa14.53□□□□□ -0.08
MRPL55-220ENST00000411464 ZNF440Q8IYI8 595 aa14.53□□□□□ -0.08
MRPL55-220ENST00000411464 TRIML2Q8N7C3 387 aa14.53□□□□□ -0.08
MRPL55-220ENST00000411464 OR4F15Q8NGB8 312 aa14.53□□□□□ -0.08
MRPL55-220ENST00000411464 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.53□□□□□ -0.08
MRPL55-220ENST00000411464 BCL2L2Q92843 193 aaPredicted RBP14.53□□□□□ -0.08
MRPL55-220ENST00000411464 ZNF317Q96PQ6 595 aaPredicted RBP14.53□□□□□ -0.08
MRPL55-220ENST00000411464 SLC38A1Q9H2H9 487 aa14.53□□□□□ -0.08
MRPL55-220ENST00000411464 TMEFF2Q9UIK5 374 aaPredicted RBP14.53□□□□□ -0.08
MRPL55-220ENST00000411464 NR5A2O00482 541 aa14.52□□□□□ -0.09
MRPL55-220ENST00000411464 VAMP5O95183 116 aa14.52□□□□□ -0.09
MRPL55-220ENST00000411464 STAMBPO95630 424 aa14.52□□□□□ -0.09
MRPL55-220ENST00000411464 DBIP07108 87 aaKnown RBP14.52□□□□□ -0.09
MRPL55-220ENST00000411464 CHRM4P08173 479 aa14.52□□□□□ -0.09
MRPL55-220ENST00000411464 CECR9P0C854 216 aa14.52□□□□□ -0.09
MRPL55-220ENST00000411464 MYZAPP0CAP1 466 aa14.52□□□□□ -0.09
MRPL55-220ENST00000411464 NR2F1P10589 423 aa14.52□□□□□ -0.09
MRPL55-220ENST00000411464 DAOP14920 347 aa14.52□□□□□ -0.09
MRPL55-220ENST00000411464 COPZ1P61923 177 aa14.52□□□□□ -0.09
MRPL55-220ENST00000411464 TXNL4AP83876 142 aaKnown RBP14.52□□□□□ -0.09
MRPL55-220ENST00000411464 IFFO1Q0D2I5 559 aa14.52□□□□□ -0.09
MRPL55-220ENST00000411464 C3orf36Q3SXR2 165 aa14.52□□□□□ -0.09
MRPL55-220ENST00000411464 FAM174BQ3ZCQ3 159 aa14.52□□□□□ -0.09
MRPL55-220ENST00000411464 MRPL2Q5T653 305 aaKnown RBP14.52□□□□□ -0.09
MRPL55-220ENST00000411464 CREB3L2Q70SY1 520 aa14.52□□□□□ -0.09
MRPL55-220ENST00000411464 LSRQ86X29 649 aaPredicted RBP14.52□□□□□ -0.09
MRPL55-220ENST00000411464 PEX5LQ8IYB4 626 aa14.52□□□□□ -0.09
MRPL55-220ENST00000411464 NEU4Q8WWR8 484 aaPredicted RBP14.52□□□□□ -0.09
MRPL55-220ENST00000411464 HPS1Q92902 700 aa14.52□□□□□ -0.09
MRPL55-220ENST00000411464 CCDC115Q96NT0 180 aa14.52□□□□□ -0.09
MRPL55-220ENST00000411464 PANX1Q96RD7 426 aa14.52□□□□□ -0.09
MRPL55-220ENST00000411464 SOX7Q9BT81 388 aa14.52□□□□□ -0.09
MRPL55-220ENST00000411464 LGALS13Q9UHV8 139 aa14.52□□□□□ -0.09
MRPL55-220ENST00000411464 BTNL2Q9UIR0 455 aa14.52□□□□□ -0.09
MRPL55-220ENST00000411464 PRDM4Q9UKN5 801 aa14.52□□□□□ -0.09
MRPL55-220ENST00000411464 NUP214P35658 2090 aaPredicted RBP14.51□□□□□ -0.09
MRPL55-220ENST00000411464 A0A096LPE4 126 aa14.51□□□□□ -0.09
MRPL55-220ENST00000411464 ARPC4-TTLL3A0A0A6YYG9 625 aa14.51□□□□□ -0.09
MRPL55-220ENST00000411464 A0A1W2PPZ6 126 aa14.51□□□□□ -0.09
MRPL55-220ENST00000411464 CCDC154A6NI56 674 aa14.51□□□□□ -0.09
MRPL55-220ENST00000411464 A8MVM7 634 aa14.51□□□□□ -0.09
MRPL55-220ENST00000411464 HOXB1P14653 301 aaPredicted RBP14.51□□□□□ -0.09
MRPL55-220ENST00000411464 GIFP27352 417 aa14.51□□□□□ -0.09
MRPL55-220ENST00000411464 APEX1P27695 318 aaKnown RBP14.51□□□□□ -0.09
MRPL55-220ENST00000411464 SELENOPP49908 381 aa14.51□□□□□ -0.09
MRPL55-220ENST00000411464 LGALS3BPQ08380 585 aa14.51□□□□□ -0.09
MRPL55-220ENST00000411464 NIPAL3Q6P499 406 aa14.51□□□□□ -0.09
MRPL55-220ENST00000411464 CADM2Q8N3J6 435 aa14.51□□□□□ -0.09
MRPL55-220ENST00000411464 ZNF781Q8N8C0 355 aa14.51□□□□□ -0.09
MRPL55-220ENST00000411464 LINC01356Q8N9X3 169 aa14.51□□□□□ -0.09
MRPL55-220ENST00000411464 NUP37Q8NFH4 326 aa14.51□□□□□ -0.09
MRPL55-220ENST00000411464 MAGEE2Q8TD90 523 aaPredicted RBP14.51□□□□□ -0.09
MRPL55-220ENST00000411464 ALKBH3Q96Q83 286 aaPredicted RBP14.51□□□□□ -0.09
MRPL55-220ENST00000411464 RLIMQ9NVW2 624 aa14.51□□□□□ -0.09
MRPL55-220ENST00000411464 CRNNQ9UBG3 495 aaPredicted RBP14.51□□□□□ -0.09
MRPL55-220ENST00000411464 PCDHB14Q9Y5E9 798 aa14.51□□□□□ -0.09
MRPL55-220ENST00000411464 E9PBE3 544 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms