RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 GP6Q9HCN6 339 aa21.23■□□□□ 0.99
UBE2E3-202ENST00000410062 GALNT8Q9NY28 637 aa21.23■□□□□ 0.99
UBE2E3-202ENST00000410062 GMNNO75496 209 aa21.22■□□□□ 0.99
UBE2E3-202ENST00000410062 COX6B1P14854 86 aa21.22■□□□□ 0.99
UBE2E3-202ENST00000410062 IGFBP2P18065 325 aa21.22■□□□□ 0.99
UBE2E3-202ENST00000410062 OTUD3Q5T2D3 398 aaPredicted RBP21.22■□□□□ 0.99
UBE2E3-202ENST00000410062 ZNF474Q6S9Z5 364 aaPredicted RBP21.22■□□□□ 0.99
UBE2E3-202ENST00000410062 PAQR6Q6TCH4 344 aa21.22■□□□□ 0.99
UBE2E3-202ENST00000410062 WDR88Q6ZMY6 472 aa21.22■□□□□ 0.99
UBE2E3-202ENST00000410062 ACBD4Q8NC06 268 aa21.22■□□□□ 0.99
UBE2E3-202ENST00000410062 PIGXQ8TBF5 258 aa21.22■□□□□ 0.99
UBE2E3-202ENST00000410062 TAAR8Q969N4 342 aa21.22■□□□□ 0.99
UBE2E3-202ENST00000410062 HSH2DQ96JZ2 352 aa21.22■□□□□ 0.99
UBE2E3-202ENST00000410062 PLSCR4Q9NRQ2 329 aa21.22■□□□□ 0.99
UBE2E3-202ENST00000410062 PKDREJQ9NTG1 2253 aa21.21■□□□□ 0.99
UBE2E3-202ENST00000410062 ZNF716A6NP11 495 aa21.21■□□□□ 0.99
UBE2E3-202ENST00000410062 FTCDNL1E5RQL4 147 aa21.21■□□□□ 0.99
UBE2E3-202ENST00000410062 TAS2R41P59536 307 aa21.21■□□□□ 0.99
UBE2E3-202ENST00000410062 PIN1Q13526 163 aaPredicted RBP21.21■□□□□ 0.99
UBE2E3-202ENST00000410062 FXNQ16595 210 aa21.21■□□□□ 0.99
UBE2E3-202ENST00000410062 LINC00114Q6XXX2 140 aa21.21■□□□□ 0.99
UBE2E3-202ENST00000410062 FKBP9P1Q75LS8 142 aa21.21■□□□□ 0.99
UBE2E3-202ENST00000410062 GDF7Q7Z4P5 450 aa21.21■□□□□ 0.99
UBE2E3-202ENST00000410062 MFSD8Q8NHS3 518 aa21.21■□□□□ 0.99
UBE2E3-202ENST00000410062 SLC41A3Q96GZ6 507 aa21.21■□□□□ 0.99
UBE2E3-202ENST00000410062 AMBRA1Q9C0C7 1298 aa21.21■□□□□ 0.99
UBE2E3-202ENST00000410062 SNX13Q9Y5W8 968 aa21.21■□□□□ 0.99
UBE2E3-202ENST00000410062 TRAV36DV7A0A075B6V5 113 aa21.2■□□□□ 0.98
UBE2E3-202ENST00000410062 FOXD4Q12950 439 aaPredicted RBP21.2■□□□□ 0.98
UBE2E3-202ENST00000410062 IFI44LQ53G44 452 aa21.2■□□□□ 0.98
UBE2E3-202ENST00000410062 C5orf46Q6UWT4 87 aa21.2■□□□□ 0.98
UBE2E3-202ENST00000410062 SPOCK3Q9BQ16 436 aa21.2■□□□□ 0.98
UBE2E3-202ENST00000410062 GORASP2Q9H8Y8 452 aa21.2■□□□□ 0.98
UBE2E3-202ENST00000410062 DCAF13Q9NV06 445 aaKnown RBP21.2■□□□□ 0.98
UBE2E3-202ENST00000410062 TAS2R1Q9NYW7 299 aa21.2■□□□□ 0.98
UBE2E3-202ENST00000410062 MAGEL2Q9UJ55 1249 aa21.2■□□□□ 0.98
UBE2E3-202ENST00000410062 FOXD3Q9UJU5 478 aaPredicted RBP21.2■□□□□ 0.98
UBE2E3-202ENST00000410062 RPS6KA6Q9UK32 745 aa21.2■□□□□ 0.98
UBE2E3-202ENST00000410062 CBLP22681 906 aa21.19■□□□□ 0.98
UBE2E3-202ENST00000410062 YAP1P46937 504 aaKnown RBP21.19■□□□□ 0.98
UBE2E3-202ENST00000410062 EXOC3L2Q2M3D2 409 aa21.19■□□□□ 0.98
UBE2E3-202ENST00000410062 DMRTC2Q8IXT2 367 aaPredicted RBP21.19■□□□□ 0.98
UBE2E3-202ENST00000410062 GEMIN6Q8WXD5 167 aaKnown RBP21.19■□□□□ 0.98
UBE2E3-202ENST00000410062 TACO1Q9BSH4 297 aaKnown RBP21.19■□□□□ 0.98
UBE2E3-202ENST00000410062 TMEM43Q9BTV4 400 aa21.19■□□□□ 0.98
UBE2E3-202ENST00000410062 RIMS3Q9UJD0 308 aa21.19■□□□□ 0.98
UBE2E3-202ENST00000410062 UNC79Q9P2D8 2635 aa21.19■□□□□ 0.98
UBE2E3-202ENST00000410062 IGKV3D-15A0A087WSY6 115 aa21.19■□□□□ 0.98
UBE2E3-202ENST00000410062 AQP7P3A6NL99 342 aa21.19■□□□□ 0.98
UBE2E3-202ENST00000410062 ZNF724A8MTY0 619 aa21.19■□□□□ 0.98
UBE2E3-202ENST00000410062 ARPC2O15144 300 aa21.19■□□□□ 0.98
UBE2E3-202ENST00000410062 OR2T1O43869 369 aa21.19■□□□□ 0.98
UBE2E3-202ENST00000410062 IFNW1P05000 195 aa21.19■□□□□ 0.98
UBE2E3-202ENST00000410062 GTF2E2P29084 291 aaKnown RBP21.19■□□□□ 0.98
UBE2E3-202ENST00000410062 FAM27E3Q08E93 113 aa21.19■□□□□ 0.98
UBE2E3-202ENST00000410062 PDK3Q15120 406 aa21.19■□□□□ 0.98
UBE2E3-202ENST00000410062 SPATS1Q496A3 300 aa21.19■□□□□ 0.98
UBE2E3-202ENST00000410062 FAM69AQ5T7M9 428 aa21.19■□□□□ 0.98
UBE2E3-202ENST00000410062 ZC3HAV1Q7Z2W4 902 aaKnown RBP21.19■□□□□ 0.98
UBE2E3-202ENST00000410062 FAM86B1Q8N7N1 296 aa21.19■□□□□ 0.98
UBE2E3-202ENST00000410062 MARVELD3Q96A59 401 aa21.19■□□□□ 0.98
UBE2E3-202ENST00000410062 EPYCQ99645 322 aa21.19■□□□□ 0.98
UBE2E3-202ENST00000410062 PRSS27Q9BQR3 290 aa21.19■□□□□ 0.98
UBE2E3-202ENST00000410062 C1orf21Q9H246 121 aa21.19■□□□□ 0.98
UBE2E3-202ENST00000410062 SEC14L4Q9UDX3 406 aa21.19■□□□□ 0.98
UBE2E3-202ENST00000410062 J3KTA2 159 aa21.18■□□□□ 0.98
UBE2E3-202ENST00000410062 HNRNPRO43390 633 aaKnown RBP21.18■□□□□ 0.98
UBE2E3-202ENST00000410062 OR5F1O95221 314 aa21.18■□□□□ 0.98
UBE2E3-202ENST00000410062 P2RY4P51582 365 aa21.18■□□□□ 0.98
UBE2E3-202ENST00000410062 SLC16A1P53985 500 aa21.18■□□□□ 0.98
UBE2E3-202ENST00000410062 LTBQ06643 244 aa21.18■□□□□ 0.98
UBE2E3-202ENST00000410062 TTC33Q6PID6 262 aaPredicted RBP21.18■□□□□ 0.98
UBE2E3-202ENST00000410062 NKAIN4Q8IVV8 208 aa21.18■□□□□ 0.98
UBE2E3-202ENST00000410062 MPP4Q96JB8 637 aa21.18■□□□□ 0.98
UBE2E3-202ENST00000410062 POLR2J2Q9GZM3 115 aaKnown RBP21.18■□□□□ 0.98
UBE2E3-202ENST00000410062 POLR2J3Q9H1A7 115 aaKnown RBP21.18■□□□□ 0.98
UBE2E3-202ENST00000410062 EMC3Q9P0I2 261 aa21.18■□□□□ 0.98
UBE2E3-202ENST00000410062 A4GNTQ9UNA3 340 aa21.18■□□□□ 0.98
UBE2E3-202ENST00000410062 SAMD4AQ9UPU9 718 aaKnown RBP21.18■□□□□ 0.98
UBE2E3-202ENST00000410062 V9GYQ6 96 aa21.18■□□□□ 0.98
UBE2E3-202ENST00000410062 FREM1Q5H8C1 2179 aa21.17■□□□□ 0.98
UBE2E3-202ENST00000410062 DCHS2Q6V1P9 2916 aa21.17■□□□□ 0.98
UBE2E3-202ENST00000410062 LRRN3E7EW58 273 aa21.17■□□□□ 0.98
UBE2E3-202ENST00000410062 KPNA4O00629 521 aaPredicted RBP21.17■□□□□ 0.98
UBE2E3-202ENST00000410062 PDE5AO76074 875 aa21.17■□□□□ 0.98
UBE2E3-202ENST00000410062 EDNRAP25101 427 aa21.17■□□□□ 0.98
UBE2E3-202ENST00000410062 SLC17A1Q14916 467 aa21.17■□□□□ 0.98
UBE2E3-202ENST00000410062 TMEM225Q6GV28 225 aa21.17■□□□□ 0.98
UBE2E3-202ENST00000410062 TFAP2EQ6VUC0 442 aa21.17■□□□□ 0.98
UBE2E3-202ENST00000410062 GALNT5Q7Z7M9 940 aa21.17■□□□□ 0.98
UBE2E3-202ENST00000410062 GPAT4Q86UL3 456 aa21.17■□□□□ 0.98
UBE2E3-202ENST00000410062 KIF18BQ86Y91 864 aa21.17■□□□□ 0.98
UBE2E3-202ENST00000410062 PRRC1Q96M27 445 aa21.17■□□□□ 0.98
UBE2E3-202ENST00000410062 C6orf203Q9P0P8 240 aaPredicted RBP21.17■□□□□ 0.98
UBE2E3-202ENST00000410062 NOSIPQ9Y314 301 aaKnown RBP21.17■□□□□ 0.98
UBE2E3-202ENST00000410062 M0R082 166 aa21.16■□□□□ 0.98
UBE2E3-202ENST00000410062 BGLAPP02818 100 aa21.16■□□□□ 0.98
UBE2E3-202ENST00000410062 POU2F1P14859 743 aa21.16■□□□□ 0.98
UBE2E3-202ENST00000410062 GRPRP30550 384 aa21.16■□□□□ 0.98
UBE2E3-202ENST00000410062 NTF4P34130 210 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms