RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 DPP4P27487 766 aa15.29■□□□□ 0.04
LIMS2-208ENST00000410011 UQCRC1P31930 480 aa15.29■□□□□ 0.04
LIMS2-208ENST00000410011 PRPS1P60891 318 aa15.29■□□□□ 0.04
LIMS2-208ENST00000410011 SRP54P61011 504 aaKnown RBP15.29■□□□□ 0.04
LIMS2-208ENST00000410011 RPS4XP62701 263 aaKnown RBP15.29■□□□□ 0.04
LIMS2-208ENST00000410011 LGALSLQ3ZCW2 172 aaPredicted RBP15.29■□□□□ 0.04
LIMS2-208ENST00000410011 SLC6A19Q695T7 634 aa15.29■□□□□ 0.04
LIMS2-208ENST00000410011 DGAT2L6Q6ZPD8 337 aa15.29■□□□□ 0.04
LIMS2-208ENST00000410011 SLC35F3Q8IY50 421 aa15.29■□□□□ 0.04
LIMS2-208ENST00000410011 SHISA5Q8N114 240 aa15.29■□□□□ 0.04
LIMS2-208ENST00000410011 C15orf40Q8WUR7 153 aa15.29■□□□□ 0.04
LIMS2-208ENST00000410011 RAB40AQ8WXH6 277 aa15.29■□□□□ 0.04
LIMS2-208ENST00000410011 KXD1Q9BQD3 176 aa15.29■□□□□ 0.04
LIMS2-208ENST00000410011 G6PC3Q9BUM1 346 aa15.29■□□□□ 0.04
LIMS2-208ENST00000410011 C20orf85Q9H1P6 137 aa15.29■□□□□ 0.04
LIMS2-208ENST00000410011 NOX4Q9NPH5 578 aa15.29■□□□□ 0.04
LIMS2-208ENST00000410011 FBXL3Q9UKT7 428 aa15.29■□□□□ 0.04
LIMS2-208ENST00000410011 CLEC4AQ9UMR7 237 aa15.29■□□□□ 0.04
LIMS2-208ENST00000410011 H0Y8X5 98 aa15.29■□□□□ 0.04
LIMS2-208ENST00000410011 OR10H2O60403 315 aa15.29■□□□□ 0.04
LIMS2-208ENST00000410011 MT-ND4P03905 459 aa15.29■□□□□ 0.04
LIMS2-208ENST00000410011 SPI1P17947 270 aa15.29■□□□□ 0.04
LIMS2-208ENST00000410011 PSMB1P20618 241 aaKnown RBP15.29■□□□□ 0.04
LIMS2-208ENST00000410011 HNRNPA2B1P22626 353 aaKnown RBP15.29■□□□□ 0.04
LIMS2-208ENST00000410011 DNASE1P24855 282 aa15.29■□□□□ 0.04
LIMS2-208ENST00000410011 PRSS45Q7RTY3 260 aa15.29■□□□□ 0.04
LIMS2-208ENST00000410011 ARHGEF39Q8N4T4 335 aa15.29■□□□□ 0.04
LIMS2-208ENST00000410011 ZNF614Q8N883 585 aa15.29■□□□□ 0.04
LIMS2-208ENST00000410011 NXPE2Q96DL1 559 aa15.29■□□□□ 0.04
LIMS2-208ENST00000410011 RBM18Q96H35 190 aaKnown RBP15.29■□□□□ 0.04
LIMS2-208ENST00000410011 GFI1Q99684 422 aa15.29■□□□□ 0.04
LIMS2-208ENST00000410011 PDCD1LG2Q9BQ51 273 aa15.29■□□□□ 0.04
LIMS2-208ENST00000410011 LMAN2LQ9H0V9 348 aa15.29■□□□□ 0.04
LIMS2-208ENST00000410011 MTIF3Q9H2K0 278 aaKnown RBP15.29■□□□□ 0.04
LIMS2-208ENST00000410011 HRASLSQ9HDD0 168 aa15.29■□□□□ 0.04
LIMS2-208ENST00000410011 COPS3Q9UNS2 423 aa15.29■□□□□ 0.04
LIMS2-208ENST00000410011 TEX51A0A1B0GUA7 166 aa15.28■□□□□ 0.04
LIMS2-208ENST00000410011 A0A1B0GUH1 482 aa15.28■□□□□ 0.04
LIMS2-208ENST00000410011 BLACEA4D250 179 aa15.28■□□□□ 0.04
LIMS2-208ENST00000410011 MAGEB4O15481 346 aaPredicted RBP15.28■□□□□ 0.04
LIMS2-208ENST00000410011 FOXS1O43638 330 aa15.28■□□□□ 0.04
LIMS2-208ENST00000410011 TSC22D2O75157 780 aa15.28■□□□□ 0.04
LIMS2-208ENST00000410011 GLCEO94923 617 aa15.28■□□□□ 0.04
LIMS2-208ENST00000410011 IFNA7P01567 189 aa15.28■□□□□ 0.04
LIMS2-208ENST00000410011 CALCBP10092 127 aa15.28■□□□□ 0.04
LIMS2-208ENST00000410011 APEHP13798 732 aaKnown RBP15.28■□□□□ 0.04
LIMS2-208ENST00000410011 POU3F3P20264 500 aaPredicted RBP15.28■□□□□ 0.04
LIMS2-208ENST00000410011 NAA10P41227 235 aaPredicted RBP15.28■□□□□ 0.04
LIMS2-208ENST00000410011 METTL11BQ5VVY1 283 aa15.28■□□□□ 0.04
LIMS2-208ENST00000410011 GPR139Q6DWJ6 353 aa15.28■□□□□ 0.04
LIMS2-208ENST00000410011 ESPNLQ6ZVH7 1005 aa15.28■□□□□ 0.04
LIMS2-208ENST00000410011 OR11G2Q8NGC1 345 aa15.28■□□□□ 0.04
LIMS2-208ENST00000410011 SUN5Q8TC36 379 aa15.28■□□□□ 0.04
LIMS2-208ENST00000410011 LIPHQ8WWY8 451 aa15.28■□□□□ 0.04
LIMS2-208ENST00000410011 SIPA1Q96FS4 1042 aa15.28■□□□□ 0.04
LIMS2-208ENST00000410011 ZNF436Q9C0F3 470 aaPredicted RBP15.28■□□□□ 0.04
LIMS2-208ENST00000410011 C2orf42Q9NWW7 574 aa15.28■□□□□ 0.04
LIMS2-208ENST00000410011 KLHL9Q9P2J3 617 aa15.28■□□□□ 0.04
LIMS2-208ENST00000410011 DOCK8Q8NF50 2099 aa15.28■□□□□ 0.04
LIMS2-208ENST00000410011 HOXB2P14652 356 aa15.28■□□□□ 0.04
LIMS2-208ENST00000410011 COL9A1P20849 921 aa15.28■□□□□ 0.04
LIMS2-208ENST00000410011 UBE2IP63279 158 aaKnown RBP15.28■□□□□ 0.04
LIMS2-208ENST00000410011 ALG11Q2TAA5 492 aa15.28■□□□□ 0.04
LIMS2-208ENST00000410011 CLLU1Q5K131 121 aa15.28■□□□□ 0.04
LIMS2-208ENST00000410011 RFPL4BQ6ZWI9 263 aa15.28■□□□□ 0.04
LIMS2-208ENST00000410011 LSRQ86X29 649 aaPredicted RBP15.28■□□□□ 0.04
LIMS2-208ENST00000410011 OR6V1Q8N148 313 aa15.28■□□□□ 0.04
LIMS2-208ENST00000410011 OIT3Q8WWZ8 545 aa15.28■□□□□ 0.04
LIMS2-208ENST00000410011 CDCA3Q99618 268 aaPredicted RBP15.28■□□□□ 0.04
LIMS2-208ENST00000410011 UTP23Q9BRU9 249 aaKnown RBP15.28■□□□□ 0.04
LIMS2-208ENST00000410011 NPDC1Q9NQX5 325 aaPredicted RBP15.28■□□□□ 0.04
LIMS2-208ENST00000410011 CPNE7Q9UBL6 633 aa15.28■□□□□ 0.04
LIMS2-208ENST00000410011 V9GY05 133 aa15.28■□□□□ 0.04
LIMS2-208ENST00000410011 SYNDIG1LA6NDD5 238 aa15.27■□□□□ 0.04
LIMS2-208ENST00000410011 OR6C68A6NDL8 312 aa15.27■□□□□ 0.04
LIMS2-208ENST00000410011 SSNA1O43805 119 aa15.27■□□□□ 0.04
LIMS2-208ENST00000410011 ICMTO60725 284 aa15.27■□□□□ 0.04
LIMS2-208ENST00000410011 OR7A10O76100 309 aa15.27■□□□□ 0.04
LIMS2-208ENST00000410011 LDOC1O95751 146 aaPredicted RBP15.27■□□□□ 0.04
LIMS2-208ENST00000410011 PVRP15151 417 aa15.27■□□□□ 0.04
LIMS2-208ENST00000410011 MECP2P51608 486 aaKnown RBP15.27■□□□□ 0.04
LIMS2-208ENST00000410011 SLC25A1P53007 311 aa15.27■□□□□ 0.04
LIMS2-208ENST00000410011 ZP1P60852 638 aa15.27■□□□□ 0.04
LIMS2-208ENST00000410011 IGLV3-21P80748 117 aaPredicted RBP15.27■□□□□ 0.04
LIMS2-208ENST00000410011 SNTA1Q13424 505 aa15.27■□□□□ 0.04
LIMS2-208ENST00000410011 TCEA2Q15560 299 aa15.27■□□□□ 0.04
LIMS2-208ENST00000410011 LINC01590Q5TEZ4 76 aa15.27■□□□□ 0.04
LIMS2-208ENST00000410011 OLFML2AQ68BL7 652 aa15.27■□□□□ 0.04
LIMS2-208ENST00000410011 PARM1Q6UWI2 310 aa15.27■□□□□ 0.04
LIMS2-208ENST00000410011 ZNF440Q8IYI8 595 aa15.27■□□□□ 0.04
LIMS2-208ENST00000410011 OR4N2Q8NGD1 307 aa15.27■□□□□ 0.04
LIMS2-208ENST00000410011 ZNRF4Q8WWF5 429 aa15.27■□□□□ 0.04
LIMS2-208ENST00000410011 NSMAFQ92636 917 aa15.27■□□□□ 0.04
LIMS2-208ENST00000410011 RNF166Q96A37 237 aaPredicted RBP15.27■□□□□ 0.04
LIMS2-208ENST00000410011 SLC25A38Q96DW6 304 aa15.27■□□□□ 0.04
LIMS2-208ENST00000410011 ARSGQ96EG1 525 aa15.27■□□□□ 0.04
LIMS2-208ENST00000410011 MS4A3Q96HJ5 214 aa15.27■□□□□ 0.04
LIMS2-208ENST00000410011 HSPA12BQ96MM6 686 aa15.27■□□□□ 0.04
LIMS2-208ENST00000410011 DERL3Q96Q80 235 aa15.27■□□□□ 0.04
LIMS2-208ENST00000410011 NMNAT3Q96T66 252 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms