RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 TCTEX1D2Q8WW35 142 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 CNRIP1Q96F85 164 aaPredicted RBP4.06□□□□□ -1.76
LSM5-205ENST00000409952 TMEM80Q96HE8 168 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 CELF6Q96J87 481 aaKnown RBP4.06□□□□□ -1.76
LSM5-205ENST00000409952 PRAC1Q96KF2 57 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 GLT1D1Q96MS3 346 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 TMEM246Q9BRR3 403 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 SYT11Q9BT88 431 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 MFFQ9GZY8 342 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 NEUROG2Q9H2A3 272 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 RBKSQ9H477 322 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 SP140LQ9H930 580 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 ZNF302Q9NR11 478 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 ADA2Q9NZK5 511 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 GAB2Q9UQC2 676 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 KCNIP3Q9Y2W7 256 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 FBXO7Q9Y3I1 522 aa4.06□□□□□ -1.76
LSM5-205ENST00000409952 A0A087WW49 117 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 GOLGA8QA0A0J9YX86 632 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 RAB19A4D1S5 217 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 OR5B21A6NL26 309 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 VSTM2BA6NLU5 285 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 GOSR2O14653 212 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 NIPSNAP2O75323 286 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 CBR3O75828 277 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 CCNB2O95067 398 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 IGHG1P01857 330 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 HLA-HP01893 362 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 SNRPCP09234 159 aaKnown RBP4.05□□□□□ -1.76
LSM5-205ENST00000409952 HSD17B1P14061 328 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 DPEP1P16444 411 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 BCL3P20749 454 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 IL12AP29459 219 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 PDHA2P29803 388 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 OXTRP30559 389 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 KCNJ3P48549 501 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 ATP4BP51164 291 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 PKNOX1P55347 436 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 LINC00205P59089 165 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 RPS14P62263 151 aaKnown RBP4.05□□□□□ -1.76
LSM5-205ENST00000409952 LCN2P80188 198 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 VLDLRP98155 873 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 IL18R1Q13478 541 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 OR5I1Q13606 314 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 NECTIN1Q15223 517 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 MS4A13Q5J8X5 152 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 GPR107Q5VW38 600 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 MEDAGQ5VYS4 303 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 SPECC1LQ69YQ0 1117 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 SLC35E4Q6ICL7 350 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 LCLAT1Q6UWP7 414 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 FRRS1Q6ZNA5 592 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 FRA10AC1Q70Z53 315 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 PGAP1Q75T13 922 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 ERICH1Q86X53 443 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 DCUN1D3Q8IWE4 304 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 CIARTQ8N365 385 aaPredicted RBP4.05□□□□□ -1.76
LSM5-205ENST00000409952 CSNK1A1LQ8N752 337 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 ZNF491Q8N8L2 437 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 FBXL13Q8NEE6 735 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 PRSS33Q8NF86 280 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 CA5BP1Q8WTZ4 195 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 FAM131CQ96AQ9 280 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 C8orf76Q96K31 380 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 ART5Q96L15 291 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 C9orf72Q96LT7 481 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 FOXN4Q96NZ1 517 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 HINT2Q9BX68 163 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 BBS2Q9BXC9 721 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 C1QTNF4Q9BXJ3 329 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 FRMD8P1Q9BZ68 369 aaPredicted RBP4.05□□□□□ -1.76
LSM5-205ENST00000409952 B3GAT2Q9NPZ5 323 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 EXOSC3Q9NQT5 275 aaKnown RBP4.05□□□□□ -1.76
LSM5-205ENST00000409952 ZFP57Q9NU63 452 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 MLXQ9UH92 298 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 SMCHD1A6NHR9 2005 aa4.05□□□□□ -1.76
LSM5-205ENST00000409952 IGHV3-38A0A0C4DH36 116 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 ARHGEF33A8MVX0 844 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 KRTAP29-1A8MX34 341 aaPredicted RBP4.04□□□□□ -1.76
LSM5-205ENST00000409952 SLCO1B7G3V0H7 640 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 GFYI3L273 518 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 ZBTB5O15062 677 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 NOL4O94818 638 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 CDK14O94921 469 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 IGHV3-9P01782 118 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 PIGRP01833 764 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 IFNW1P05000 195 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 CD55P08174 381 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 UBTFL1P0CB47 393 aaPredicted RBP4.04□□□□□ -1.76
LSM5-205ENST00000409952 PMCHP20382 165 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 IGFBP5P24593 272 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 FOXN2P32314 431 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 CFHR2P36980 270 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 OPRL1P41146 370 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 HNRNPA3P51991 378 aaKnown RBP4.04□□□□□ -1.76
LSM5-205ENST00000409952 ERVK-25P63136 954 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 LRRC63Q05C16 580 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 OXA1LQ15070 435 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 NCF4Q15080 339 aa4.04□□□□□ -1.76
LSM5-205ENST00000409952 C18orf21Q32NC0 220 aaPredicted RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms