RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 SHCBP1LQ9BZQ2 653 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 KLHL4Q9C0H6 718 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 RAB33BQ9H082 229 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 NSRP1Q9H0G5 558 aaKnown RBP3.72□□□□□ -1.81
CLK1-203ENST00000409769 WDR13Q9H1Z4 485 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 SPNS1Q9H2V7 528 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 SRMSQ9H3Y6 488 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 XKR8Q9H6D3 395 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 MEAF6Q9HAF1 191 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 MARCOQ9UEW3 520 aaPredicted RBP3.72□□□□□ -1.81
CLK1-203ENST00000409769 TAC3Q9UHF0 121 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 RNF11Q9Y3C5 154 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 PYGO1Q9Y3Y4 419 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 CCL27Q9Y4X3 112 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 KLK4Q9Y5K2 254 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 KNTC1P50748 2209 aa3.72□□□□□ -1.81
CLK1-203ENST00000409769 SCN3AQ9NY46 2000 aa3.71□□□□□ -1.81
CLK1-203ENST00000409769 WDFY4Q6ZS81 3184 aa3.71□□□□□ -1.81
CLK1-203ENST00000409769 RIF1Q5UIP0 2472 aaKnown RBP3.71□□□□□ -1.81
CLK1-203ENST00000409769 ANKRD61A6NGH8 418 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 C2orf74A8MZ97 194 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 MANBAO00462 879 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 CDX4O14627 284 aaPredicted RBP3.71□□□□□ -1.82
CLK1-203ENST00000409769 HDAC3O15379 428 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 NUDT21O43809 227 aaKnown RBP3.71□□□□□ -1.82
CLK1-203ENST00000409769 LRP3O75074 770 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 TRMUO75648 421 aaKnown RBP3.71□□□□□ -1.82
CLK1-203ENST00000409769 C9P02748 559 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 C1GALT1C1LP0DN25 315 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 TROVE2P10155 538 aaKnown RBP eCLIP3.71□□□□□ -1.82
CLK1-203ENST00000409769 UROSP10746 265 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 UGT2B7P16662 529 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 HNF4AP41235 474 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 RAD52P43351 418 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 CAPZBP47756 277 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 GABRA4P48169 554 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 MRPL19P49406 292 aaKnown RBP3.71□□□□□ -1.82
CLK1-203ENST00000409769 LUMP51884 338 aaPredicted RBP3.71□□□□□ -1.82
CLK1-203ENST00000409769 AQP5P55064 265 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 PPP1CAP62136 330 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 CSNK1G2P78368 415 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 IRF8Q02556 426 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 ZNF33BQ06732 778 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 DOC2AQ14183 400 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 KIAA0040Q15053 153 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 RBBP7Q16576 425 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 SLC5A12Q1EHB4 618 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 ODF4Q2M2E3 257 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 ZFP69Q49AA0 526 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 KLHL26Q53HC5 615 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 XKR6Q5GH73 641 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 C9orf152Q5JTZ5 239 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 FFAR4Q5NUL3 377 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 ADNP2Q6IQ32 1131 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 FAAP20Q6NZ36 180 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 C6orf89Q6UWU4 347 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 ZNF497Q6ZNH5 498 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 Q6ZSR9 355 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 EFL1Q7Z2Z2 1120 aaKnown RBP3.71□□□□□ -1.82
CLK1-203ENST00000409769 CAMKMTQ7Z624 323 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 TMPRSS11BQ86T26 416 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 PAQR7Q86WK9 346 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 C17orf64Q86WR6 236 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 OOSP2Q86WS3 158 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 RAB42Q8N4Z0 105 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 C2orf73Q8N5S3 287 aaPredicted RBP3.71□□□□□ -1.82
CLK1-203ENST00000409769 SNX31Q8N9S9 440 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 OR4E2Q8NGC2 313 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 AGR3Q8TD06 166 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 C19orf60Q96EN9 201 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 C11orf24Q96F05 449 aaPredicted RBP3.71□□□□□ -1.82
CLK1-203ENST00000409769 THOC1Q96FV9 657 aaKnown RBP3.71□□□□□ -1.82
CLK1-203ENST00000409769 FCRL1Q96LA6 429 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 OPRPNQ99935 248 aaPredicted RBP3.71□□□□□ -1.82
CLK1-203ENST00000409769 CCDC28BQ9BUN5 200 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 EFCAB11Q9BUY7 163 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 FAM107BQ9H098 131 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 ABCG4Q9H172 646 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 RHBGQ9H310 441 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 RABEP2Q9H5N1 569 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 ZNF385DQ9H6B1 395 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 NT5DC2Q9H857 520 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 ACTR8Q9H981 624 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 MRPS30Q9NP92 439 aaKnown RBP3.71□□□□□ -1.82
CLK1-203ENST00000409769 ANKMY1Q9P2S6 941 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 EPHA6Q9UF33 1036 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 GMEB2Q9UKD1 530 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 PILRAQ9UKJ1 303 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 POMT2Q9UKY4 750 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 RAB23Q9ULC3 237 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 ZNF490Q9ULM2 529 aaPredicted RBP3.71□□□□□ -1.82
CLK1-203ENST00000409769 TIMM22Q9Y584 194 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 ANGPTL3Q9Y5C1 460 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 RNF215Q9Y6U7 377 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 SCN2AQ99250 2005 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 VPS13AQ96RL7 3174 aa3.71□□□□□ -1.82
CLK1-203ENST00000409769 MN1Q10571 1320 aaPredicted RBP3.7□□□□□ -1.82
CLK1-203ENST00000409769 IGHV1OR21-1A0A087WYE8 117 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 A0A0G2JND7 137 aa3.7□□□□□ -1.82
CLK1-203ENST00000409769 A0A0J9YY10 115 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms