RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 DCHS1Q96JQ0 3298 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 PINLYPA6NC86 204 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 ANKRD33BA6NCL7 494 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 CLCA1A8K7I4 914 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 C11orf98E9PRG8 122 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 NPIPB7O75200 414 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 TRIM3O75382 744 aaPredicted RBP11.25□□□□□ -0.61
CHMP3-204ENST00000409727 FADS2O95864 444 aaKnown RBP11.25□□□□□ -0.61
CHMP3-204ENST00000409727 STSP08842 583 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 GRK5P34947 590 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 SFTPDP35247 375 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 RFC3P40938 356 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 MAP2K4P45985 399 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 RPL5P46777 297 aaKnown RBP11.25□□□□□ -0.61
CHMP3-204ENST00000409727 NR1H2P55055 460 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 RPS4XP62701 263 aaKnown RBP11.25□□□□□ -0.61
CHMP3-204ENST00000409727 TUBA4AP68366 448 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 EFNB1P98172 346 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 RPL18Q07020 188 aaKnown RBP11.25□□□□□ -0.61
CHMP3-204ENST00000409727 C19orf57Q0VDD7 668 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 CDC20Q12834 499 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 OR7A5Q15622 319 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 DEFB109BQ30KR1 87 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 NADK2Q4G0N4 442 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 ALG10Q5BKT4 473 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 FAM69AQ5T7M9 428 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 PLBD1Q6P4A8 553 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 CCDC81Q6ZN84 652 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 CPOQ8IVL8 374 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 SPARTQ8N0X7 666 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 FAM26EQ8N5C1 309 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 CYB561A3Q8NBI2 242 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 ANKK1Q8NFD2 765 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 BBS1Q8NFJ9 593 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 KCNE4Q8WWG9 221 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 TMIGD2Q96BF3 282 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 DDIT4LQ96D03 193 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 TMEM41AQ96HV5 264 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 KATNB1Q9BVA0 655 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 DUSP21Q9H596 190 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 FKRPQ9H9S5 495 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 SERINC1Q9NRX5 453 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 TUBA8Q9NY65 449 aaPredicted RBP11.25□□□□□ -0.61
CHMP3-204ENST00000409727 PSORS1C1Q9UIG5 152 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 ZNF229Q9UJW7 825 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 PCDHGB6Q9Y5F9 930 aa11.25□□□□□ -0.61
CHMP3-204ENST00000409727 SPTBN2O15020 2390 aa11.24□□□□□ -0.61
CHMP3-204ENST00000409727 SH3D21A4FU49 640 aa11.24□□□□□ -0.61
CHMP3-204ENST00000409727 ZNF891A8MT65 544 aaPredicted RBP11.24□□□□□ -0.61
CHMP3-204ENST00000409727 RGS10O43665 173 aa11.24□□□□□ -0.61
CHMP3-204ENST00000409727 CBR3O75828 277 aa11.24□□□□□ -0.61
CHMP3-204ENST00000409727 APOL3O95236 402 aa11.24□□□□□ -0.61
CHMP3-204ENST00000409727 IGF2P01344 180 aa11.24□□□□□ -0.61
CHMP3-204ENST00000409727 MT-ND2P03891 347 aa11.24□□□□□ -0.61
CHMP3-204ENST00000409727 RFPL3SP0C7P2 107 aa11.24□□□□□ -0.61
CHMP3-204ENST00000409727 SDHBP21912 280 aa11.24□□□□□ -0.61
CHMP3-204ENST00000409727 AHCYP23526 432 aa11.24□□□□□ -0.61
CHMP3-204ENST00000409727 C21orf33P30042 268 aaPredicted RBP11.24□□□□□ -0.61
CHMP3-204ENST00000409727 GRPRP30550 384 aa11.24□□□□□ -0.61
CHMP3-204ENST00000409727 DSCR4P56555 118 aaPredicted RBP11.24□□□□□ -0.61
CHMP3-204ENST00000409727 PRPS1P60891 318 aa11.24□□□□□ -0.61
CHMP3-204ENST00000409727 CSNK2BP67870 215 aa11.24□□□□□ -0.61
CHMP3-204ENST00000409727 GLYR1Q49A26 553 aaPredicted RBP11.24□□□□□ -0.61
CHMP3-204ENST00000409727 MAMDC2Q7Z304 686 aaPredicted RBP11.24□□□□□ -0.61
CHMP3-204ENST00000409727 STX19Q8N4C7 294 aa11.24□□□□□ -0.61
CHMP3-204ENST00000409727 FAM98AQ8NCA5 519 aaKnown RBP11.24□□□□□ -0.61
CHMP3-204ENST00000409727 OR52E2Q8NGJ4 325 aa11.24□□□□□ -0.61
CHMP3-204ENST00000409727 OR4K13Q8NH42 304 aa11.24□□□□□ -0.61
CHMP3-204ENST00000409727 STK35Q8TDR2 534 aa11.24□□□□□ -0.61
CHMP3-204ENST00000409727 SMPDL3BQ92485 455 aa11.24□□□□□ -0.61
CHMP3-204ENST00000409727 ZBTB8AQ96BR9 441 aa11.24□□□□□ -0.61
CHMP3-204ENST00000409727 TAPBPLQ9BX59 468 aa11.24□□□□□ -0.61
CHMP3-204ENST00000409727 HINT3Q9NQE9 182 aaKnown RBP11.24□□□□□ -0.61
CHMP3-204ENST00000409727 PLCXD1Q9NUJ7 323 aa11.24□□□□□ -0.61
CHMP3-204ENST00000409727 POLHQ9Y253 713 aa11.24□□□□□ -0.61
CHMP3-204ENST00000409727 HIF3AQ9Y2N7 669 aa11.24□□□□□ -0.61
CHMP3-204ENST00000409727 A0A1W2PNR3 127 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 HTR3EA5X5Y0 456 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 A6NHS1 94 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 LRRC3CA6NJW4 275 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 RIIAD1A6NNX1 92 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 M0R082 166 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 TRAPPC6AO75865 159 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 PLGP00747 810 aaPredicted RBP11.23□□□□□ -0.61
CHMP3-204ENST00000409727 ADORA3P0DMS8 318 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 HIST1H1CP16403 213 aaKnown RBP11.23□□□□□ -0.61
CHMP3-204ENST00000409727 CNR1P21554 472 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 GTF2E2P29084 291 aaKnown RBP11.23□□□□□ -0.61
CHMP3-204ENST00000409727 SHC1P29353 583 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 CTXN1P60606 82 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 ARG2P78540 354 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 TEKQ02763 1124 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 ZNF91Q05481 1191 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 ST3GAL4Q11206 333 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 OCLNQ16625 522 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 SLC25A53Q5H9E4 307 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 TMEM201Q5SNT2 666 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 C3orf33Q6P1S2 294 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 B3GLCTQ6Y288 498 aa11.23□□□□□ -0.61
CHMP3-204ENST00000409727 DPY19L2P2Q6ZN68 376 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms