RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 CLDN18P56856 261 aa14.83□□□□□ -0.04
TSPAN4-208ENST00000409531 PRKCDQ05655 676 aa14.83□□□□□ -0.04
TSPAN4-208ENST00000409531 PPP1R8Q12972 351 aaKnown RBP14.83□□□□□ -0.04
TSPAN4-208ENST00000409531 MYBPHQ13203 477 aa14.83□□□□□ -0.04
TSPAN4-208ENST00000409531 SF3B4Q15427 424 aaKnown RBP eCLIP14.83□□□□□ -0.044e-7■■■■■ 33.9
TSPAN4-208ENST00000409531 SEC23BQ15437 767 aa14.83□□□□□ -0.04
TSPAN4-208ENST00000409531 MTFR2Q6P444 385 aa14.83□□□□□ -0.04
TSPAN4-208ENST00000409531 TBPL2Q6SJ96 375 aa14.83□□□□□ -0.04
TSPAN4-208ENST00000409531 TMPPEQ6ZT21 453 aa14.83□□□□□ -0.04
TSPAN4-208ENST00000409531 CHMP1BQ7LBR1 199 aa14.83□□□□□ -0.04
TSPAN4-208ENST00000409531 GGNQ86UU5 652 aa14.83□□□□□ -0.04
TSPAN4-208ENST00000409531 DOLPP1Q86YN1 238 aa14.83□□□□□ -0.04
TSPAN4-208ENST00000409531 ICA1LQ8NDH6 482 aa14.83□□□□□ -0.04
TSPAN4-208ENST00000409531 MFSD8Q8NHS3 518 aa14.83□□□□□ -0.04
TSPAN4-208ENST00000409531 FAM57AQ8TBR7 257 aa14.83□□□□□ -0.04
TSPAN4-208ENST00000409531 BPIFA2Q96DR5 249 aa14.83□□□□□ -0.04
TSPAN4-208ENST00000409531 KTI12Q96EK9 354 aaPredicted RBP14.83□□□□□ -0.04
TSPAN4-208ENST00000409531 SGTBQ96EQ0 304 aa14.83□□□□□ -0.04
TSPAN4-208ENST00000409531 ARL5BQ96KC2 179 aa14.83□□□□□ -0.04
TSPAN4-208ENST00000409531 PSD2Q9BQI7 771 aa14.83□□□□□ -0.04
TSPAN4-208ENST00000409531 OSBPL10Q9BXB5 764 aa14.83□□□□□ -0.04
TSPAN4-208ENST00000409531 MEPEQ9NQ76 525 aaPredicted RBP14.83□□□□□ -0.04
TSPAN4-208ENST00000409531 PDP1Q9P0J1 537 aaPredicted RBP14.83□□□□□ -0.04
TSPAN4-208ENST00000409531 SH3BGRL2Q9UJC5 107 aa14.83□□□□□ -0.04
TSPAN4-208ENST00000409531 TINAGQ9UJW2 476 aa14.83□□□□□ -0.04
TSPAN4-208ENST00000409531 SPTAN1Q13813 2472 aaKnown RBP14.83□□□□□ -0.04
TSPAN4-208ENST00000409531 SPTBN1Q01082 2364 aaKnown RBP14.83□□□□□ -0.04
TSPAN4-208ENST00000409531 A0A0J9YW62 118 aa14.82□□□□□ -0.04
TSPAN4-208ENST00000409531 ENO4A6NNW6 628 aa14.82□□□□□ -0.04
TSPAN4-208ENST00000409531 NPIPA2E9PIF3 369 aa14.82□□□□□ -0.04
TSPAN4-208ENST00000409531 NPIPA3F8WFD2 350 aa14.82□□□□□ -0.04
TSPAN4-208ENST00000409531 DNPH1O43598 174 aa14.82□□□□□ -0.04
TSPAN4-208ENST00000409531 OPN1LWP04000 364 aa14.82□□□□□ -0.04
TSPAN4-208ENST00000409531 ANXA8P13928 327 aa14.82□□□□□ -0.04
TSPAN4-208ENST00000409531 PTNP21246 168 aa14.82□□□□□ -0.04
TSPAN4-208ENST00000409531 GTF2E2P29084 291 aaKnown RBP14.82□□□□□ -0.04
TSPAN4-208ENST00000409531 SHC1P29353 583 aa14.82□□□□□ -0.04
TSPAN4-208ENST00000409531 CLDN20P56880 219 aa14.82□□□□□ -0.04
TSPAN4-208ENST00000409531 NUP107P57740 925 aa14.82□□□□□ -0.04
TSPAN4-208ENST00000409531 SLC35A1P78382 337 aa14.82□□□□□ -0.04
TSPAN4-208ENST00000409531 CTU2Q2VPK5 515 aaKnown RBP14.82□□□□□ -0.04
TSPAN4-208ENST00000409531 HBMQ6B0K9 141 aa14.82□□□□□ -0.04
TSPAN4-208ENST00000409531 P3H2Q8IVL5 708 aa14.82□□□□□ -0.04
TSPAN4-208ENST00000409531 C10orf53Q8N6V4 93 aa14.82□□□□□ -0.04
TSPAN4-208ENST00000409531 OR10G2Q8NGC3 310 aa14.82□□□□□ -0.04
TSPAN4-208ENST00000409531 OR2V1Q8NHB1 315 aa14.82□□□□□ -0.04
TSPAN4-208ENST00000409531 PFN4Q8NHR9 129 aa14.82□□□□□ -0.04
TSPAN4-208ENST00000409531 TAAR8Q969N4 342 aa14.82□□□□□ -0.04
TSPAN4-208ENST00000409531 ZHX1-C8orf76Q96EF9 292 aa14.82□□□□□ -0.04
TSPAN4-208ENST00000409531 WDYHV1Q96HA8 205 aa14.82□□□□□ -0.04
TSPAN4-208ENST00000409531 PRDM14Q9GZV8 571 aa14.82□□□□□ -0.04
TSPAN4-208ENST00000409531 OAZ3Q9UMX2 235 aa14.82□□□□□ -0.04
TSPAN4-208ENST00000409531 MGAT4BQ9UQ53 548 aa14.82□□□□□ -0.04
TSPAN4-208ENST00000409531 CAMK2AQ9UQM7 478 aa14.82□□□□□ -0.04
TSPAN4-208ENST00000409531 CORINQ9Y5Q5 1042 aa14.82□□□□□ -0.04
TSPAN4-208ENST00000409531 DOPEY1Q5JWR5 2465 aa14.82□□□□□ -0.04
TSPAN4-208ENST00000409531 A0A1W2PNR3 127 aa14.81□□□□□ -0.04
TSPAN4-208ENST00000409531 LIPT2A6NK58 231 aa14.81□□□□□ -0.04
TSPAN4-208ENST00000409531 TNFSF11O14788 317 aa14.81□□□□□ -0.04
TSPAN4-208ENST00000409531 PIP5K1CO60331 668 aa14.81□□□□□ -0.04
TSPAN4-208ENST00000409531 EIF1BO60739 113 aaKnown RBP14.81□□□□□ -0.04
TSPAN4-208ENST00000409531 ZG16O60844 167 aa14.81□□□□□ -0.04
TSPAN4-208ENST00000409531 CH25HO95992 272 aa14.81□□□□□ -0.04
TSPAN4-208ENST00000409531 TPOP07202 933 aa14.81□□□□□ -0.04
TSPAN4-208ENST00000409531 EIF1AXP47813 144 aaKnown RBP14.81□□□□□ -0.04
TSPAN4-208ENST00000409531 DIO1P49895 249 aa14.81□□□□□ -0.04
TSPAN4-208ENST00000409531 SUCLG1P53597 346 aaKnown RBP14.81□□□□□ -0.04
TSPAN4-208ENST00000409531 CARD18P57730 90 aa14.81□□□□□ -0.04
TSPAN4-208ENST00000409531 RAC3P60763 192 aa14.81□□□□□ -0.04
TSPAN4-208ENST00000409531 SRYQ05066 204 aa14.81□□□□□ -0.04
TSPAN4-208ENST00000409531 TAF11Q15544 211 aa14.81□□□□□ -0.04
TSPAN4-208ENST00000409531 SGCBQ16585 318 aa14.81□□□□□ -0.04
TSPAN4-208ENST00000409531 C1orf94Q6P1W5 598 aa14.81□□□□□ -0.04
TSPAN4-208ENST00000409531 TMPRSS11FQ6ZWK6 438 aa14.81□□□□□ -0.04
TSPAN4-208ENST00000409531 MAMDC2Q7Z304 686 aaPredicted RBP14.81□□□□□ -0.04
TSPAN4-208ENST00000409531 TMEM179BQ7Z7N9 219 aa14.81□□□□□ -0.04
TSPAN4-208ENST00000409531 OR10D3Q8NH80 312 aa14.81□□□□□ -0.04
TSPAN4-208ENST00000409531 GNPDA2Q8TDQ7 276 aa14.81□□□□□ -0.04
TSPAN4-208ENST00000409531 DNAJC9Q8WXX5 260 aa14.81□□□□□ -0.04
TSPAN4-208ENST00000409531 OSTF1Q92882 214 aa14.81□□□□□ -0.04
TSPAN4-208ENST00000409531 CPNE4Q96A23 557 aaPredicted RBP14.81□□□□□ -0.04
TSPAN4-208ENST00000409531 ADGRG7Q96K78 797 aa14.81□□□□□ -0.04
TSPAN4-208ENST00000409531 C9orf16Q9BUW7 83 aa14.81□□□□□ -0.04
TSPAN4-208ENST00000409531 PTDSS2Q9BVG9 487 aa14.81□□□□□ -0.04
TSPAN4-208ENST00000409531 ASPNQ9BXN1 380 aa14.81□□□□□ -0.04
TSPAN4-208ENST00000409531 COQ10BQ9H8M1 238 aa14.81□□□□□ -0.04
TSPAN4-208ENST00000409531 FKRPQ9H9S5 495 aa14.81□□□□□ -0.04
TSPAN4-208ENST00000409531 ZNF556Q9HAH1 456 aa14.81□□□□□ -0.04
TSPAN4-208ENST00000409531 NANSQ9NR45 359 aa14.81□□□□□ -0.04
TSPAN4-208ENST00000409531 C20orf141Q9NUB4 165 aa14.81□□□□□ -0.04
TSPAN4-208ENST00000409531 ALKBH4Q9NXW9 302 aa14.81□□□□□ -0.04
TSPAN4-208ENST00000409531 KIF17Q9P2E2 1029 aa14.81□□□□□ -0.04
TSPAN4-208ENST00000409531 ZNF229Q9UJW7 825 aa14.81□□□□□ -0.04
TSPAN4-208ENST00000409531 ICE1Q9Y2F5 2266 aa14.8□□□□□ -0.04
TSPAN4-208ENST00000409531 OR7A10O76100 309 aa14.8□□□□□ -0.04
TSPAN4-208ENST00000409531 ATP6V1G2O95670 118 aa14.8□□□□□ -0.04
TSPAN4-208ENST00000409531 ADAP00813 363 aa14.8□□□□□ -0.04
TSPAN4-208ENST00000409531 BGLAPP02818 100 aa14.8□□□□□ -0.04
TSPAN4-208ENST00000409531 HIST1H2ABP04908 130 aa14.8□□□□□ -0.04
TSPAN4-208ENST00000409531 SAGP10523 405 aaPredicted RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms