RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 ISXQ2M1V0 245 aa18.84■□□□□ 0.61
USP39-203ENST00000409470 CD200R1LQ6Q8B3 271 aa18.84■□□□□ 0.61
USP39-203ENST00000409470 NANOGNBQ7Z5D8 188 aa18.84■□□□□ 0.61
USP39-203ENST00000409470 NPEPL1Q8NDH3 523 aa18.84■□□□□ 0.61
USP39-203ENST00000409470 B4GALNT2Q8NHY0 566 aa18.84■□□□□ 0.61
USP39-203ENST00000409470 TAAR8Q969N4 342 aa18.84■□□□□ 0.61
USP39-203ENST00000409470 SLC25A46Q96AG3 418 aa18.84■□□□□ 0.61
USP39-203ENST00000409470 C8orf44Q96CB5 159 aa18.84■□□□□ 0.61
USP39-203ENST00000409470 WDR77Q9BQA1 342 aaPredicted RBP18.84■□□□□ 0.61
USP39-203ENST00000409470 HDHD5Q9BXW7 423 aa18.84■□□□□ 0.61
USP39-203ENST00000409470 C19orf25Q9UFG5 118 aaPredicted RBP18.84■□□□□ 0.61
USP39-203ENST00000409470 DAPK2Q9UIK4 370 aa18.84■□□□□ 0.61
USP39-203ENST00000409470 PPIEQ9UNP9 301 aaKnown RBP18.84■□□□□ 0.61
USP39-203ENST00000409470 TEX13CA0A0J9YWL9 993 aa18.83■□□□□ 0.61
USP39-203ENST00000409470 PFDN1O60925 122 aa18.83■□□□□ 0.61
USP39-203ENST00000409470 OCM2P0CE71 109 aa18.83■□□□□ 0.61
USP39-203ENST00000409470 OCMP0CE72 109 aaPredicted RBP18.83■□□□□ 0.61
USP39-203ENST00000409470 SDC2P34741 201 aa18.83■□□□□ 0.61
USP39-203ENST00000409470 FBXW4P57775 412 aa18.83■□□□□ 0.61
USP39-203ENST00000409470 SLC26A5P58743 744 aa18.83■□□□□ 0.61
USP39-203ENST00000409470 RAB15P59190 212 aa18.83■□□□□ 0.61
USP39-203ENST00000409470 CTXN1P60606 82 aa18.83■□□□□ 0.61
USP39-203ENST00000409470 IFITM3Q01628 133 aa18.83■□□□□ 0.61
USP39-203ENST00000409470 QPRTQ15274 297 aa18.83■□□□□ 0.61
USP39-203ENST00000409470 TBC1D25Q3MII6 688 aa18.83■□□□□ 0.61
USP39-203ENST00000409470 SPANXN2Q5MJ10 180 aa18.83■□□□□ 0.61
USP39-203ENST00000409470 SYT14Q8NB59 555 aa18.83■□□□□ 0.61
USP39-203ENST00000409470 COX4I2Q96KJ9 171 aa18.83■□□□□ 0.61
USP39-203ENST00000409470 Q96M85 177 aa18.83■□□□□ 0.61
USP39-203ENST00000409470 TIMP4Q99727 224 aa18.83■□□□□ 0.61
USP39-203ENST00000409470 COQ7Q99807 217 aa18.83■□□□□ 0.61
USP39-203ENST00000409470 NDEL1Q9GZM8 345 aa18.83■□□□□ 0.61
USP39-203ENST00000409470 SLC26A1Q9H2B4 701 aa18.83■□□□□ 0.61
USP39-203ENST00000409470 AKIRIN1Q9H9L7 192 aaPredicted RBP18.83■□□□□ 0.61
USP39-203ENST00000409470 QPCTLQ9NXS2 382 aa18.83■□□□□ 0.61
USP39-203ENST00000409470 SLC6A5Q9Y345 797 aa18.83■□□□□ 0.61
USP39-203ENST00000409470 A0A1W2PQL4 384 aaPredicted RBP18.83■□□□□ 0.6
USP39-203ENST00000409470 RGS5O15539 181 aa18.83■□□□□ 0.6
USP39-203ENST00000409470 CD14P08571 375 aa18.83■□□□□ 0.6
USP39-203ENST00000409470 CLEC2LP0C7M8 214 aa18.83■□□□□ 0.6
USP39-203ENST00000409470 ZNF85Q03923 595 aa18.83■□□□□ 0.6
USP39-203ENST00000409470 HNRNPA0Q13151 305 aaKnown RBP18.83■□□□□ 0.6
USP39-203ENST00000409470 JAZF1Q86VZ6 243 aa18.83■□□□□ 0.6
USP39-203ENST00000409470 GPALPP1Q8IXQ4 340 aa18.83■□□□□ 0.6
USP39-203ENST00000409470 PARP16Q8N5Y8 322 aa18.83■□□□□ 0.6
USP39-203ENST00000409470 OR5L2Q8NGL0 311 aa18.83■□□□□ 0.6
USP39-203ENST00000409470 CNN2Q99439 309 aaKnown RBP18.83■□□□□ 0.6
USP39-203ENST00000409470 ASB6Q9NWX5 421 aa18.83■□□□□ 0.6
USP39-203ENST00000409470 GPN3Q9UHW5 284 aaPredicted RBP18.83■□□□□ 0.6
USP39-203ENST00000409470 ZNF229Q9UJW7 825 aa18.83■□□□□ 0.6
USP39-203ENST00000409470 MUC3AQ02505 3323 aa18.82■□□□□ 0.6
USP39-203ENST00000409470 VPS13AQ96RL7 3174 aa18.82■□□□□ 0.6
USP39-203ENST00000409470 WDR87Q6ZQQ6 2873 aa18.82■□□□□ 0.6
USP39-203ENST00000409470 OR6C68A6NDL8 312 aa18.82■□□□□ 0.6
USP39-203ENST00000409470 J3QLW9 94 aa18.82■□□□□ 0.6
USP39-203ENST00000409470 RNF13O43567 381 aa18.82■□□□□ 0.6
USP39-203ENST00000409470 F13BP05160 661 aa18.82■□□□□ 0.6
USP39-203ENST00000409470 ZNF19P17023 458 aa18.82■□□□□ 0.6
USP39-203ENST00000409470 TGM4P49221 684 aa18.82■□□□□ 0.6
USP39-203ENST00000409470 POLR2HP52434 150 aaKnown RBP18.82■□□□□ 0.6
USP39-203ENST00000409470 GPR50Q13585 617 aa18.82■□□□□ 0.6
USP39-203ENST00000409470 TRIM16LQ309B1 348 aa18.82■□□□□ 0.6
USP39-203ENST00000409470 LEG1Q6P5S2 330 aa18.82■□□□□ 0.6
USP39-203ENST00000409470 NUP54Q7Z3B4 507 aa18.82■□□□□ 0.6
USP39-203ENST00000409470 MARCH9Q86YJ5 346 aa18.82■□□□□ 0.6
USP39-203ENST00000409470 MISPQ8IVT2 679 aa18.82■□□□□ 0.6
USP39-203ENST00000409470 POMGNT2Q8NAT1 580 aa18.82■□□□□ 0.6
USP39-203ENST00000409470 ZPLD1Q8TCW7 415 aa18.82■□□□□ 0.6
USP39-203ENST00000409470 TMCO6Q96DC7 493 aa18.82■□□□□ 0.6
USP39-203ENST00000409470 DNAJA3Q96EY1 480 aa18.82■□□□□ 0.6
USP39-203ENST00000409470 C4orf36Q96KX1 117 aa18.82■□□□□ 0.6
USP39-203ENST00000409470 MED18Q9BUE0 208 aa18.82■□□□□ 0.6
USP39-203ENST00000409470 FKRPQ9H9S5 495 aa18.82■□□□□ 0.6
USP39-203ENST00000409470 TRAV36DV7A0A075B6V5 113 aa18.81■□□□□ 0.6
USP39-203ENST00000409470 GABRPO00591 440 aa18.81■□□□□ 0.6
USP39-203ENST00000409470 IMPA2O14732 288 aa18.81■□□□□ 0.6
USP39-203ENST00000409470 ZNF354AO60765 605 aaPredicted RBP18.81■□□□□ 0.6
USP39-203ENST00000409470 ZNF28P17035 718 aa18.81■□□□□ 0.6
USP39-203ENST00000409470 SPI1P17947 270 aa18.81■□□□□ 0.6
USP39-203ENST00000409470 UQCRC1P31930 480 aa18.81■□□□□ 0.6
USP39-203ENST00000409470 RPL18Q07020 188 aaKnown RBP18.81■□□□□ 0.6
USP39-203ENST00000409470 C11orf91Q3C1V1 193 aa18.81■□□□□ 0.6
USP39-203ENST00000409470 VASNQ6EMK4 673 aa18.81■□□□□ 0.6
USP39-203ENST00000409470 MRPL14Q6P1L8 145 aaKnown RBP18.81■□□□□ 0.6
USP39-203ENST00000409470 TMEM205Q6UW68 189 aa18.81■□□□□ 0.6
USP39-203ENST00000409470 ARIH2OSQ8N7S6 290 aa18.81■□□□□ 0.6
USP39-203ENST00000409470 LRRC75AQ8NAA5 344 aa18.81■□□□□ 0.6
USP39-203ENST00000409470 OR6K6Q8NGW6 343 aa18.81■□□□□ 0.6
USP39-203ENST00000409470 GPR119Q8TDV5 335 aa18.81■□□□□ 0.6
USP39-203ENST00000409470 DDOQ99489 341 aa18.81■□□□□ 0.6
USP39-203ENST00000409470 ABCB10Q9NRK6 738 aa18.81■□□□□ 0.6
USP39-203ENST00000409470 TAS2R10Q9NYW0 307 aa18.81■□□□□ 0.6
USP39-203ENST00000409470 TMED7-TICAM2A0A0A6YYA0 188 aa18.81■□□□□ 0.6
USP39-203ENST00000409470 CD8B2A6NJW9 211 aa18.81■□□□□ 0.6
USP39-203ENST00000409470 SUSD5O60279 629 aa18.81■□□□□ 0.6
USP39-203ENST00000409470 CD8BP10966 210 aa18.81■□□□□ 0.6
USP39-203ENST00000409470 CCL4P13236 92 aa18.81■□□□□ 0.6
USP39-203ENST00000409470 APEHP13798 732 aaKnown RBP18.81■□□□□ 0.6
USP39-203ENST00000409470 NAA10P41227 235 aaPredicted RBP18.81■□□□□ 0.6
USP39-203ENST00000409470 DIO1P49895 249 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms