RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 SCN2BO60939 215 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 PEX11AO75192 247 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 SKAP2O75563 359 aaPredicted RBP6.75□□□□□ -1.33
LSM5-202ENST00000409292 VAMP5O95183 116 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 STAMBPO95630 424 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 GPIP06744 558 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 ITGA5P08648 1049 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 LAMP1P11279 417 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 ANPEPP15144 967 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 NPR2P20594 1047 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 GIFP27352 417 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 CFPP27918 469 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 GTF2E2P29084 291 aaKnown RBP6.75□□□□□ -1.33
LSM5-202ENST00000409292 LSP1P33241 339 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 CRHR1P34998 444 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 LIMS1P48059 325 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 IDH2P48735 452 aaKnown RBP6.75□□□□□ -1.33
LSM5-202ENST00000409292 POLR2HP52434 150 aaKnown RBP6.75□□□□□ -1.33
LSM5-202ENST00000409292 CDH15P55291 814 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 SH3BGRP55822 239 aaPredicted RBP6.75□□□□□ -1.33
LSM5-202ENST00000409292 COPZ1P61923 177 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 ARHGAP11BQ3KRB8 267 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 C3orf36Q3SXR2 165 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 GPAT3Q53EU6 434 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 OTUD3Q5T2D3 398 aaPredicted RBP6.75□□□□□ -1.33
LSM5-202ENST00000409292 TSPO2Q5TGU0 170 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 FAM219BQ5XKK7 198 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 PAQR6Q6TCH4 344 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 RINLQ6ZS11 566 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 C6orf120Q7Z4R8 191 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 CMIPQ8IY22 773 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 ANKS4BQ8N8V4 417 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 WDR31Q8NA23 367 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 OR7A2PQ8NGA2 310 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 OR5D16Q8NGK9 328 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 OR5AK3PQ8NH89 298 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 PSMA8Q8TAA3 256 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 UBASH3BQ8TF42 649 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 TWIST2Q8WVJ9 160 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 TMEM45BQ96B21 275 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 SNX18Q96RF0 628 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 KLHDC3Q9BQ90 382 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 RBM4Q9BWF3 364 aaKnown RBP6.75□□□□□ -1.33
LSM5-202ENST00000409292 DPY30Q9C005 99 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 PLK3Q9H4B4 646 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 METTL17Q9H7H0 456 aaPredicted RBP6.75□□□□□ -1.33
LSM5-202ENST00000409292 EXOSC3Q9NQT5 275 aaKnown RBP6.75□□□□□ -1.33
LSM5-202ENST00000409292 SLC7A10Q9NS82 523 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 GPATCH2Q9NW75 528 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 MKLN1Q9UL63 735 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 PYCARDQ9ULZ3 195 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 HIF3AQ9Y2N7 669 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 NOX1Q9Y5S8 564 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 FLVCR1Q9Y5Y0 555 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 TMED7-TICAM2A0A0A6YYA0 188 aa6.74□□□□□ -1.33
LSM5-202ENST00000409292 LRP5LA4QPB2 252 aa6.74□□□□□ -1.33
LSM5-202ENST00000409292 hCG_2039718K7EN88 272 aa6.74□□□□□ -1.33
LSM5-202ENST00000409292 KLF11O14901 512 aa6.74□□□□□ -1.33
LSM5-202ENST00000409292 RIPK2O43353 540 aa6.74□□□□□ -1.33
LSM5-202ENST00000409292 AKAP8O43823 692 aaKnown RBP6.74□□□□□ -1.33
LSM5-202ENST00000409292 EIF4EBP3O60516 100 aaPredicted RBP6.74□□□□□ -1.33
LSM5-202ENST00000409292 PLIN3O60664 434 aa6.74□□□□□ -1.33
LSM5-202ENST00000409292 DNAJA2O60884 412 aa6.74□□□□□ -1.33
LSM5-202ENST00000409292 UGT2B17O75795 530 aa6.74□□□□□ -1.33
LSM5-202ENST00000409292 GUSBP08236 651 aa6.74□□□□□ -1.33
LSM5-202ENST00000409292 FGF4P08620 206 aa6.74□□□□□ -1.33
LSM5-202ENST00000409292 TACSTD2P09758 323 aa6.74□□□□□ -1.33
LSM5-202ENST00000409292 CXCR1P25024 350 aa6.74□□□□□ -1.33
LSM5-202ENST00000409292 EDNRAP25101 427 aa6.74□□□□□ -1.33
LSM5-202ENST00000409292 CHI3L1P36222 383 aaPredicted RBP6.74□□□□□ -1.33
LSM5-202ENST00000409292 KHKP50053 298 aa6.74□□□□□ -1.33
LSM5-202ENST00000409292 KCNJ10P78508 379 aa6.74□□□□□ -1.33
LSM5-202ENST00000409292 TXNL4AP83876 142 aaKnown RBP6.74□□□□□ -1.33
LSM5-202ENST00000409292 GSTA3Q16772 222 aa6.74□□□□□ -1.33
LSM5-202ENST00000409292 PGS1Q32NB8 556 aa6.74□□□□□ -1.33
LSM5-202ENST00000409292 TBRG1Q3YBR2 411 aa6.74□□□□□ -1.33
LSM5-202ENST00000409292 ANXA8L1Q5VT79 327 aa6.74□□□□□ -1.33
LSM5-202ENST00000409292 IL23RQ5VWK5 629 aa6.74□□□□□ -1.33
LSM5-202ENST00000409292 KANK2Q63ZY3 851 aa6.74□□□□□ -1.33
LSM5-202ENST00000409292 SPATA21Q7Z572 469 aa6.74□□□□□ -1.33
LSM5-202ENST00000409292 GPAT4Q86UL3 456 aa6.74□□□□□ -1.33
LSM5-202ENST00000409292 CCDC103Q8IW40 242 aa6.74□□□□□ -1.33
LSM5-202ENST00000409292 CCDC36Q8IYA8 594 aa6.74□□□□□ -1.33
LSM5-202ENST00000409292 ZNF440Q8IYI8 595 aa6.74□□□□□ -1.33
LSM5-202ENST00000409292 ZNF786Q8N393 782 aa6.74□□□□□ -1.33
LSM5-202ENST00000409292 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.74□□□□□ -1.33
LSM5-202ENST00000409292 OR4A15Q8NGL6 344 aa6.74□□□□□ -1.33
LSM5-202ENST00000409292 OR2T11Q8NH01 316 aa6.74□□□□□ -1.33
LSM5-202ENST00000409292 XAGE5Q8WWM1 108 aa6.74□□□□□ -1.33
LSM5-202ENST00000409292 TUBGCP3Q96CW5 907 aa6.74□□□□□ -1.33
LSM5-202ENST00000409292 COQ8BQ96D53 544 aa6.74□□□□□ -1.33
LSM5-202ENST00000409292 AURKBQ96GD4 344 aaPredicted RBP6.74□□□□□ -1.33
LSM5-202ENST00000409292 CCDC106Q9BWC9 280 aa6.74□□□□□ -1.33
LSM5-202ENST00000409292 ZNF350Q9GZX5 532 aa6.74□□□□□ -1.33
LSM5-202ENST00000409292 MS4A5Q9H3V2 200 aa6.74□□□□□ -1.33
LSM5-202ENST00000409292 ARMC7Q9H6L4 198 aa6.74□□□□□ -1.33
LSM5-202ENST00000409292 ZNF442Q9H7R0 627 aa6.74□□□□□ -1.33
LSM5-202ENST00000409292 TMED7Q9Y3B3 224 aa6.74□□□□□ -1.33
LSM5-202ENST00000409292 DNAJC15Q9Y5T4 150 aa6.74□□□□□ -1.33
LSM5-202ENST00000409292 PTGDR2Q9Y5Y4 395 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms