RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 RNF13O43567 381 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 NIPSNAP2O75323 286 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 NOL4O94818 638 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 GNA14O95837 355 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 PIGRP01833 764 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 LGALS2P05162 132 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 HOXD4P09016 255 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 NF2P35240 595 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 LEPP41159 167 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 PTGDSP41222 190 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 ELK3P41970 407 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 BLVRAP53004 296 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 HMGCS2P54868 508 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 SLC8A3P57103 927 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 LMO4P61968 165 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 KDSRQ06136 332 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 CRMP1Q14194 572 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 GRB7Q14451 532 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 STK38Q15208 465 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 TRIM16LQ309B1 348 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 CCDC14Q49A88 953 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 DMRTC1Q5HYR2 192 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 THOC7Q6I9Y2 204 aaKnown RBP3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 TMEM107Q6UX40 140 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 ATP6V0D2Q8N8Y2 350 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 SDR9C7Q8NEX9 313 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 OR1L6Q8NGR2 347 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 DDI1Q8WTU0 396 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 PIBF1Q8WXW3 757 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 PSMG2Q969U7 264 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 TRIM51Q9BSJ1 452 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 MTG1Q9BT17 334 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 DPH7Q9BTV6 452 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 ELOVL4Q9GZR5 314 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 FANCEQ9HB96 536 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 KLHL28Q9NXS3 571 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 PAK5Q9P286 719 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 MTRF1LQ9UGC7 380 aaKnown RBP3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 DDX19BQ9UMR2 479 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 STYXL1Q9Y6J8 313 aa3.8□□□□□ -1.8
HMGB1P13-201ENST00000406019 ANKRD30BQ9BXX2 1392 aa3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 RALGAPA1Q6GYQ0 2036 aa3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 TRAV9-2A0A087WT02 112 aa3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 VSTM2BA6NLU5 285 aa3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 EFCAB7A8K855 629 aa3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 ERI2A8K979 691 aaKnown RBP3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 A8MX80 341 aa3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 IDSB3KWA1 339 aa3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 E7ESA3 106 aa3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 CASC3O15234 703 aaKnown RBP3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 RGS16O15492 202 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 RRP8O43159 456 aaKnown RBP3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 ZNF253O75346 499 aa3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 MCF2P10911 925 aa3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 CD1CP29017 333 aa3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 HOXA6P31267 233 aa3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 HTR2BP41595 481 aa3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 RANBP1P43487 201 aa3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 RPL29P47914 159 aaKnown RBP3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 PAX2Q02962 417 aa3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 AANATQ16613 207 aa3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 MICBQ29980 383 aa3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 SPANXN2Q5MJ10 180 aa3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 RAET1LQ5VY80 246 aa3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 PDPK2PQ6A1A2 396 aa3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 C17orf82Q86X59 251 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 PSTKQ8IV42 348 aaKnown RBP3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 ZNF440Q8IYI8 595 aa3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 GTPBP8Q8N3Z3 284 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 VN1R17PQ8TDU5 208 aa3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 PAQR8Q8TEZ7 354 aa3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 TCTEX1D2Q8WW35 142 aa3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 HTR3CQ8WXA8 447 aa3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 PEX13Q92968 403 aa3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 NUS1Q96E22 293 aa3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 MCCC1Q96RQ3 725 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 TBX15Q96SF7 602 aa3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 FMO2Q99518 471 aa3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 XKR8Q9H6D3 395 aa3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 NHEJ1Q9H9Q4 299 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 NTN4Q9HB63 628 aa3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 NMRAL1Q9HBL8 299 aa3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 NANSQ9NR45 359 aa3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 NRBP2Q9NSY0 501 aa3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 IKZF2Q9UKS7 526 aa3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 CFL2Q9Y281 166 aa3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 GMEB1Q9Y692 573 aa3.79□□□□□ -1.8
HMGB1P13-201ENST00000406019 PRDM2Q13029 1718 aa3.78□□□□□ -1.8
HMGB1P13-201ENST00000406019 A0A1B0GUS0 222 aa3.78□□□□□ -1.8
HMGB1P13-201ENST00000406019 GOLGA8MH3BSY2 632 aa3.78□□□□□ -1.8
HMGB1P13-201ENST00000406019 DYNC1I1O14576 645 aa3.78□□□□□ -1.8
HMGB1P13-201ENST00000406019 GALR3O60755 368 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P13-201ENST00000406019 TMEM50AO95807 157 aa3.78□□□□□ -1.8
HMGB1P13-201ENST00000406019 KITLGP21583 273 aa3.78□□□□□ -1.8
HMGB1P13-201ENST00000406019 ADORA2BP29275 332 aa3.78□□□□□ -1.8
HMGB1P13-201ENST00000406019 HNRNPH3P31942 346 aaKnown RBP3.78□□□□□ -1.8
HMGB1P13-201ENST00000406019 SYKP43405 635 aa3.78□□□□□ -1.8
HMGB1P13-201ENST00000406019 EIF3EP60228 445 aaKnown RBP3.78□□□□□ -1.8
HMGB1P13-201ENST00000406019 KRTAP10-3P60369 221 aa3.78□□□□□ -1.8
HMGB1P13-201ENST00000406019 PPIL2Q13356 520 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms