RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 BBS10Q8TAM1 723 aa13.51□□□□□ -0.25
TPM1-207ENST00000403994 GTPBP3Q969Y2 492 aaKnown RBP13.51□□□□□ -0.25
TPM1-207ENST00000403994 TRAF4Q9BUZ4 470 aaPredicted RBP13.51□□□□□ -0.25
TPM1-207ENST00000403994 BCL2L10Q9HD36 194 aa13.51□□□□□ -0.25
TPM1-207ENST00000403994 SLC7A10Q9NS82 523 aa13.51□□□□□ -0.25
TPM1-207ENST00000403994 DCTN4Q9UJW0 460 aa13.51□□□□□ -0.25
TPM1-207ENST00000403994 PRDM4Q9UKN5 801 aa13.51□□□□□ -0.25
TPM1-207ENST00000403994 IFT52Q9Y366 437 aa13.51□□□□□ -0.25
TPM1-207ENST00000403994 ANK3Q12955 4377 aaKnown RBP13.5□□□□□ -0.25
TPM1-207ENST00000403994 A8MVM7 634 aa13.5□□□□□ -0.25
TPM1-207ENST00000403994 NPIPB7O75200 414 aa13.5□□□□□ -0.25
TPM1-207ENST00000403994 ARAFP10398 606 aa13.5□□□□□ -0.25
TPM1-207ENST00000403994 ZNF83P51522 516 aa13.5□□□□□ -0.25
TPM1-207ENST00000403994 P2RY4P51582 365 aa13.5□□□□□ -0.25
TPM1-207ENST00000403994 SLC25A3Q00325 362 aa13.5□□□□□ -0.25
TPM1-207ENST00000403994 HOXC5Q00444 222 aa13.5□□□□□ -0.25
TPM1-207ENST00000403994 ETFDHQ16134 617 aa13.5□□□□□ -0.25
TPM1-207ENST00000403994 GABRA6Q16445 453 aa13.5□□□□□ -0.25
TPM1-207ENST00000403994 ZNF311Q5JNZ3 666 aa13.5□□□□□ -0.25
TPM1-207ENST00000403994 TSPO2Q5TGU0 170 aa13.5□□□□□ -0.25
TPM1-207ENST00000403994 C1orf140Q5VVS0 124 aa13.5□□□□□ -0.25
TPM1-207ENST00000403994 OR7E24Q6IFN5 339 aa13.5□□□□□ -0.25
TPM1-207ENST00000403994 BLOC1S3Q6QNY0 202 aa13.5□□□□□ -0.25
TPM1-207ENST00000403994 TMEM108Q6UXF1 575 aa13.5□□□□□ -0.25
TPM1-207ENST00000403994 GPAT4Q86UL3 456 aa13.5□□□□□ -0.25
TPM1-207ENST00000403994 C10orf111Q8N326 155 aa13.5□□□□□ -0.25
TPM1-207ENST00000403994 ZIC4Q8N9L1 334 aa13.5□□□□□ -0.25
TPM1-207ENST00000403994 C1orf162Q8NEQ5 155 aaPredicted RBP13.5□□□□□ -0.25
TPM1-207ENST00000403994 SPDL1Q96EA4 605 aa13.5□□□□□ -0.25
TPM1-207ENST00000403994 ZNF385AQ96PM9 386 aaKnown RBP13.5□□□□□ -0.25
TPM1-207ENST00000403994 CCDC28BQ9BUN5 200 aa13.5□□□□□ -0.25
TPM1-207ENST00000403994 SF3B5Q9BWJ5 86 aaKnown RBP13.5□□□□□ -0.25
TPM1-207ENST00000403994 ARMC7Q9H6L4 198 aa13.5□□□□□ -0.25
TPM1-207ENST00000403994 SLC52A3Q9NQ40 469 aa13.5□□□□□ -0.25
TPM1-207ENST00000403994 FAIMQ9NVQ4 179 aa13.5□□□□□ -0.25
TPM1-207ENST00000403994 PARPBPQ9NWS1 579 aa13.5□□□□□ -0.25
TPM1-207ENST00000403994 ADPRHL2Q9NX46 363 aa13.5□□□□□ -0.25
TPM1-207ENST00000403994 CISD1Q9NZ45 108 aaKnown RBP13.5□□□□□ -0.25
TPM1-207ENST00000403994 CCDC167Q9P0B6 97 aa13.5□□□□□ -0.25
TPM1-207ENST00000403994 TRBV5-3A0A0A0MS03 114 aa13.49□□□□□ -0.25
TPM1-207ENST00000403994 C5orf58C9J3I9 102 aa13.49□□□□□ -0.25
TPM1-207ENST00000403994 CD8AP01732 235 aa13.49□□□□□ -0.25
TPM1-207ENST00000403994 IGHV4-39P01824 125 aa13.49□□□□□ -0.25
TPM1-207ENST00000403994 AQP5P55064 265 aa13.49□□□□□ -0.25
TPM1-207ENST00000403994 TNK1Q13470 666 aa13.49□□□□□ -0.25
TPM1-207ENST00000403994 VEZF1Q14119 521 aa13.49□□□□□ -0.25
TPM1-207ENST00000403994 PAGE3Q5JUK9 113 aa13.49□□□□□ -0.25
TPM1-207ENST00000403994 GCNT6Q5T4J0 391 aa13.49□□□□□ -0.25
TPM1-207ENST00000403994 KLHL17Q6TDP4 642 aa13.49□□□□□ -0.25
TPM1-207ENST00000403994 COMTD1Q86VU5 262 aa13.49□□□□□ -0.25
TPM1-207ENST00000403994 C17orf78Q8N4C9 275 aa13.49□□□□□ -0.25
TPM1-207ENST00000403994 NFKBIDQ8NI38 313 aa13.49□□□□□ -0.25
TPM1-207ENST00000403994 SLC35B4Q969S0 331 aa13.49□□□□□ -0.25
TPM1-207ENST00000403994 TRMT61AQ96FX7 289 aaKnown RBP13.49□□□□□ -0.25
TPM1-207ENST00000403994 MUS81Q96NY9 551 aa13.49□□□□□ -0.25
TPM1-207ENST00000403994 PTDSS2Q9BVG9 487 aa13.49□□□□□ -0.25
TPM1-207ENST00000403994 TAPBPLQ9BX59 468 aa13.49□□□□□ -0.25
TPM1-207ENST00000403994 RSPO3Q9BXY4 272 aaPredicted RBP13.49□□□□□ -0.25
TPM1-207ENST00000403994 SLCO5A1Q9H2Y9 848 aa13.49□□□□□ -0.25
TPM1-207ENST00000403994 VAPAQ9P0L0 249 aa13.49□□□□□ -0.25
TPM1-207ENST00000403994 SLAMF8Q9P0V8 285 aa13.49□□□□□ -0.25
TPM1-207ENST00000403994 UPB1Q9UBR1 384 aa13.49□□□□□ -0.25
TPM1-207ENST00000403994 ZNF232Q9UNY5 417 aa13.49□□□□□ -0.25
TPM1-207ENST00000403994 ATRQ13535 2644 aa13.48□□□□□ -0.25
TPM1-207ENST00000403994 MXRA5Q9NR99 2828 aa13.48□□□□□ -0.25
TPM1-207ENST00000403994 ETS2P15036 469 aa13.48□□□□□ -0.25
TPM1-207ENST00000403994 PTAFRP25105 342 aa13.48□□□□□ -0.25
TPM1-207ENST00000403994 CD40P25942 277 aa13.48□□□□□ -0.25
TPM1-207ENST00000403994 MPGP29372 298 aa13.48□□□□□ -0.25
TPM1-207ENST00000403994 ATP4BP51164 291 aa13.48□□□□□ -0.25
TPM1-207ENST00000403994 CLEC12BQ2HXU8 276 aa13.48□□□□□ -0.25
TPM1-207ENST00000403994 C6orf89Q6UWU4 347 aa13.48□□□□□ -0.25
TPM1-207ENST00000403994 B3GLCTQ6Y288 498 aa13.48□□□□□ -0.25
TPM1-207ENST00000403994 AAED1Q7RTV5 226 aa13.48□□□□□ -0.25
TPM1-207ENST00000403994 WDR31Q8NA23 367 aa13.48□□□□□ -0.25
TPM1-207ENST00000403994 STK35Q8TDR2 534 aa13.48□□□□□ -0.25
TPM1-207ENST00000403994 DYDC1Q8WWB3 177 aa13.48□□□□□ -0.25
TPM1-207ENST00000403994 RADILQ96JH8 1075 aa13.48□□□□□ -0.25
TPM1-207ENST00000403994 ALKBH3Q96Q83 286 aaPredicted RBP13.48□□□□□ -0.25
TPM1-207ENST00000403994 ALG2Q9H553 416 aa13.48□□□□□ -0.25
TPM1-207ENST00000403994 IKZF5Q9H5V7 419 aa13.48□□□□□ -0.25
TPM1-207ENST00000403994 PIF1Q9H611 641 aa13.48□□□□□ -0.25
TPM1-207ENST00000403994 SLC17A5Q9NRA2 495 aa13.48□□□□□ -0.25
TPM1-207ENST00000403994 MGAT4BQ9UQ53 548 aa13.48□□□□□ -0.25
TPM1-207ENST00000403994 AMDHD2Q9Y303 409 aa13.48□□□□□ -0.25
TPM1-207ENST00000403994 GMEB1Q9Y692 573 aa13.48□□□□□ -0.25
TPM1-207ENST00000403994 HEATR1Q9H583 2144 aaKnown RBP13.48□□□□□ -0.25
TPM1-207ENST00000403994 FTCDNL1E5RQL4 147 aa13.47□□□□□ -0.25
TPM1-207ENST00000403994 M0R1B8 84 aa13.47□□□□□ -0.25
TPM1-207ENST00000403994 FZD7O75084 574 aa13.47□□□□□ -0.25
TPM1-207ENST00000403994 NDUFS7O75251 213 aa13.47□□□□□ -0.25
TPM1-207ENST00000403994 AHSA1O95433 338 aa13.47□□□□□ -0.25
TPM1-207ENST00000403994 PPIBP23284 216 aaKnown RBP13.47□□□□□ -0.25
TPM1-207ENST00000403994 HTR2AP28223 471 aa13.47□□□□□ -0.25
TPM1-207ENST00000403994 PRKAR1BP31321 381 aa13.47□□□□□ -0.25
TPM1-207ENST00000403994 ACVR1BP36896 505 aa13.47□□□□□ -0.25
TPM1-207ENST00000403994 TGFBR3Q03167 851 aa13.47□□□□□ -0.25
TPM1-207ENST00000403994 EGR4Q05215 589 aa13.47□□□□□ -0.25
TPM1-207ENST00000403994 KRTAP1-1Q07627 177 aa13.47□□□□□ -0.25
TPM1-207ENST00000403994 LGALS3BPQ08380 585 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms