RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 DEFB108BQ8NET1 73 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 IFI44Q8TCB0 444 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 SLC29A1Q99808 456 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 SLC6A20Q9NP91 592 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 CHST11Q9NPF2 352 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 UBQLN4Q9NRR5 601 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 SHPKQ9UHJ6 478 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 TESK1Q15569 626 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 OGFOD3Q6PK18 319 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 MRPL10Q7Z7H8 261 aaKnown RBP12.79□□□□□ -0.36
VAPA-202ENST00000400000 OR6F1Q8NGZ6 308 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 SGK3Q96BR1 496 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 PHRF1Q9P1Y6 1649 aaKnown RBP12.79□□□□□ -0.36
VAPA-202ENST00000400000 HLA-AP01891 365 aaKnown RBP12.79□□□□□ -0.36
VAPA-202ENST00000400000 POU2F2P09086 479 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 SNRPBP14678 240 aaKnown RBP12.79□□□□□ -0.36
VAPA-202ENST00000400000 C21orf33P30042 268 aaPredicted RBP12.79□□□□□ -0.36
VAPA-202ENST00000400000 RAD52P43351 418 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 ATP1B3P54709 279 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 PDLIM3Q53GG5 364 aaPredicted RBP12.79□□□□□ -0.36
VAPA-202ENST00000400000 OR2B11Q5JQS5 317 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 FAM83HQ6ZRV2 1179 aaPredicted RBP12.79□□□□□ -0.36
VAPA-202ENST00000400000 SYT13Q7L8C5 426 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 SSX9Q7RTT3 188 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 OR7G2Q8NG99 324 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 ZBTB8AQ96BR9 441 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 NICN1Q9BSH3 213 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 PARP12Q9H0J9 701 aaKnown RBP12.79□□□□□ -0.36
VAPA-202ENST00000400000 ACOT13Q9NPJ3 140 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 A6NHS1 94 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 LGALS8O00214 317 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 BORAQ6PGQ7 559 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 RANBP10Q6VN20 620 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 RABEPKQ7Z6M1 372 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 VASH2Q86V25 355 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 MISPQ8IVT2 679 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 MS4A15Q8N5U1 240 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 OR4A16Q8NH70 328 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 TNFRSF13CQ96RJ3 184 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 PRSS16Q9NQE7 514 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 COPS3Q9UNS2 423 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 C1orf196B1AJZ1 125 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 SMLR1H3BR10 107 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 I6L893 689 aaPredicted RBP12.79□□□□□ -0.36
VAPA-202ENST00000400000 MED6O75586 246 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 UTS2O95399 124 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 GASTP01350 101 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 PHLDA2Q53GA4 152 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 RNLSQ5VYX0 342 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 HTR3DQ70Z44 454 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 TSPYL5Q86VY4 417 aaPredicted RBP12.79□□□□□ -0.36
VAPA-202ENST00000400000 SPARTQ8N0X7 666 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 PATE1Q8WXA2 126 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 MYOTQ9UBF9 498 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 ENTPD2Q9Y5L3 495 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 K7ESM1 405 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 CHATP28329 748 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 ERP29P30040 261 aaKnown RBP12.79□□□□□ -0.36
VAPA-202ENST00000400000 MED25Q71SY5 747 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 MEPCEQ7L2J0 689 aaKnown RBP12.79□□□□□ -0.36
VAPA-202ENST00000400000 PAPD5Q8NDF8 572 aaKnown RBP12.79□□□□□ -0.36
VAPA-202ENST00000400000 OR13C9Q8NGT0 318 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 UTP4Q969X6 686 aaKnown RBP12.79□□□□□ -0.36
VAPA-202ENST00000400000 MS4A4AQ96JQ5 239 aa12.79□□□□□ -0.36
VAPA-202ENST00000400000 CDK1P06493 297 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 EMP3P54852 163 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 INHBCP55103 352 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 NPSR1Q6W5P4 371 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 TMEM104Q8NE00 496 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 OR4N2Q8NGD1 307 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 OR11L1Q8NGX0 322 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 NUDT8Q8WV74 236 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 C8orf44Q96CB5 159 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 ZNF300Q96RE9 604 aaPredicted RBP12.78□□□□□ -0.36
VAPA-202ENST00000400000 GINS3Q9BRX5 216 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 NMNAT2Q9BZQ4 307 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 NME7Q9Y5B8 376 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 ZNF140P52738 457 aaPredicted RBP12.78□□□□□ -0.36
VAPA-202ENST00000400000 HCCSP53701 268 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 PRSS48Q7RTY5 328 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 ZNF740Q8NDX6 193 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 GIMAP5Q96F15 307 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 HRASLS5Q96KN8 279 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 PRRC1Q96M27 445 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 NMNAT3Q96T66 252 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 EMC6Q9BV81 110 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 SRPK3Q9UPE1 567 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 ABHD16AO95870 558 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 F2RP25116 425 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 PLA2G7Q13093 441 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 SPATS1Q496A3 300 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 MARCH8Q5T0T0 291 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 C7orf43Q8WVR3 580 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 MRI1Q9BV20 369 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 CD300AQ9UGN4 299 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 CLDN1O95832 211 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 SORDQ00796 357 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 TLE1Q04724 770 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 COQ5Q5HYK3 327 aa12.78□□□□□ -0.36
VAPA-202ENST00000400000 MRPL41Q8IXM3 137 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms