RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 SEC16AO15027 2179 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 C2orf74A8MZ97 194 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 ZNF736B4DX44 427 aaPredicted RBP13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 ZNF593O00488 134 aaPredicted RBP13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 CXCL3P19876 107 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 RBMXP38159 391 aaKnown RBP13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 MRPL19P49406 292 aaKnown RBP13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 PPT1P50897 306 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 CAPZA1P52907 286 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 C14orf28Q4W4Y0 310 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 GPR139Q6DWJ6 353 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 PGAP1Q75T13 922 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 HHIPL1Q96JK4 782 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 ARHGAP9Q9BRR9 750 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 PRSS16Q9NQE7 514 aa13.55□□□□□ -0.24
RPRD1A-202ENST00000399022 RAB40ALP0C0E4 278 aa13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 UBE2IP63279 158 aaKnown RBP13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 ANKRD33Q7Z3H0 272 aa13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 RAB40AQ8WXH6 277 aa13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 PMM1Q92871 262 aa13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 SSX3Q99909 188 aa13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 GPR174Q9BXC1 333 aa13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 TBL1XR1Q9BZK7 514 aa13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 GRHPRQ9UBQ7 328 aa13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 A0A0B4J2A0 478 aa13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 CLEC3AO75596 197 aa13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 IFNGR1P15260 489 aa13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 NRG3P56975 720 aa13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 RPS15AP62244 130 aaKnown RBP13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 ST3GAL2Q16842 350 aa13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 ARHGAP40Q5TG30 622 aa13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 PRICKLE2Q7Z3G6 844 aa13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 OR1M1Q8NGA1 313 aa13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 OR5K2Q8NHB8 316 aa13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 ACTRT3Q9BYD9 372 aa13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 SLC6A17Q9H1V8 727 aa13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 AUNIPQ9H7T9 357 aa13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 MTHFD2LQ9H903 347 aaPredicted RBP13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 SHPKQ9UHJ6 478 aa13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 SLC6A14Q9UN76 642 aa13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 PLEKHM1Q9Y4G2 1056 aa13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 ARID2Q68CP9 1835 aa13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 TCRBV16S1A1N1A0A5B0 115 aa13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 FBXO24O75426 580 aa13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 CBX7O95931 251 aa13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 LBX1P52954 281 aa13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 LTBQ06643 244 aa13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 ARHGAP19Q14CB8 494 aa13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 ACBD4Q8NC06 268 aa13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 KLHDC7BQ96G42 594 aa13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 FAM83CQ9BQN1 747 aa13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 PIGMQ9H3S5 423 aa13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 TBX21Q9UL17 535 aa13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 RPH3AQ9Y2J0 694 aaPredicted RBP13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 IER3IP1Q9Y5U9 82 aa13.54□□□□□ -0.24
RPRD1A-202ENST00000399022 C17orf113A0A1B0GUU1 675 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 RPS10-NUDT3A0A1W2PQS6 291 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 TMEM82A0PJX8 343 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 ZC3H12DA2A288 527 aaKnown RBP13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 CCDC85CA6NKD9 419 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 PLPP1O14494 284 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 MAOAP21397 527 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 RPS10P46783 165 aaKnown RBP13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 EOGTQ5NDL2 527 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 BPIFA2Q96DR5 249 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 SAMD11Q96NU1 681 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 DLL4Q9NR61 685 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 A0A087WUU8 490 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 LRIT2A6NDA9 550 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 TUBAL3A6NHL2 446 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 CSTAP01040 98 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 CXCL10P02778 98 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 RBM39Q14498 530 aaKnown RBP13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 ABI3BPQ7Z7G0 1075 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 TMEM200AQ86VY9 491 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 FOXRED1Q96CU9 486 aaPredicted RBP13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 ALG14Q96F25 216 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 SPATA6Q9NWH7 488 aaPredicted RBP13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 ZNF629Q9UEG4 869 aaPredicted RBP13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 PIAS3Q9Y6X2 628 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 DCDC2BA2VCK2 349 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 GLAP06280 429 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 CAMLGP49069 296 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 EIF4EBP2Q13542 120 aaPredicted RBP13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 SSX2Q16385 188 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 ABCA11PQ4W5N1 156 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 ALG10BQ5I7T1 473 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 ADAM5Q6NVV9 412 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 VN1R2Q8NFZ6 395 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 ST7LQ8TDW4 575 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 DVL3Q92997 716 aaPredicted RBP13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 PEX11GQ96HA9 241 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 NOX4Q9NPH5 578 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 CYSLTR2Q9NS75 346 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 FTSJ1Q9UET6 329 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 DHDHQ9UQ10 334 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 RP1L1Q8IWN7 2480 aaPredicted RBP13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 BORCS7-ASMTA0A0B4J1R7 106 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 CTSLP07711 333 aa13.53□□□□□ -0.24
RPRD1A-202ENST00000399022 TUBG1P23258 451 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms