RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 KLHL17Q6TDP4 642 aa11.95□□□□□ -0.5
SEC13-209ENST00000397117 CD300LDQ6UXZ3 194 aa11.95□□□□□ -0.5
SEC13-209ENST00000397117 MEX3DQ86XN8 651 aaKnown RBP11.95□□□□□ -0.5
SEC13-209ENST00000397117 NTNG2Q96CW9 530 aa11.95□□□□□ -0.5
SEC13-209ENST00000397117 MRGPRX4Q96LA9 322 aa11.95□□□□□ -0.5
SEC13-209ENST00000397117 GNRHR2Q96P88 292 aa11.95□□□□□ -0.5
SEC13-209ENST00000397117 MBOAT4Q96T53 435 aa11.95□□□□□ -0.5
SEC13-209ENST00000397117 FAM173AQ9BQD7 235 aa11.95□□□□□ -0.5
SEC13-209ENST00000397117 TMEM43Q9BTV4 400 aa11.95□□□□□ -0.5
SEC13-209ENST00000397117 GABARAPL3Q9BY60 117 aa11.95□□□□□ -0.5
SEC13-209ENST00000397117 FAM118AQ9NWS6 357 aa11.95□□□□□ -0.5
SEC13-209ENST00000397117 DKKL1Q9UK85 242 aa11.95□□□□□ -0.5
SEC13-209ENST00000397117 BOKQ9UMX3 212 aaPredicted RBP11.95□□□□□ -0.5
SEC13-209ENST00000397117 KLF13Q9Y2Y9 288 aaPredicted RBP11.95□□□□□ -0.5
SEC13-209ENST00000397117 TMED7Q9Y3B3 224 aa11.95□□□□□ -0.5
SEC13-209ENST00000397117 HRH3Q9Y5N1 445 aa11.95□□□□□ -0.5
SEC13-209ENST00000397117 HTR3EA5X5Y0 456 aa11.94□□□□□ -0.5
SEC13-209ENST00000397117 EFCAB9A8MZ26 197 aa11.94□□□□□ -0.5
SEC13-209ENST00000397117 H3BN98 237 aa11.94□□□□□ -0.5
SEC13-209ENST00000397117 SUSD5O60279 629 aa11.94□□□□□ -0.5
SEC13-209ENST00000397117 SAGP10523 405 aaPredicted RBP11.94□□□□□ -0.5
SEC13-209ENST00000397117 OSMP13725 252 aa11.94□□□□□ -0.5
SEC13-209ENST00000397117 AGAP20933 346 aa11.94□□□□□ -0.5
SEC13-209ENST00000397117 POU1F1P28069 291 aa11.94□□□□□ -0.5
SEC13-209ENST00000397117 EIF1P41567 113 aaKnown RBP11.94□□□□□ -0.5
SEC13-209ENST00000397117 TPD52P55327 224 aaPredicted RBP11.94□□□□□ -0.5
SEC13-209ENST00000397117 DSCR4P56555 118 aaPredicted RBP11.94□□□□□ -0.5
SEC13-209ENST00000397117 ESRRGP62508 458 aa11.94□□□□□ -0.5
SEC13-209ENST00000397117 FOXF1Q12946 379 aa11.94□□□□□ -0.5
SEC13-209ENST00000397117 MED21Q13503 144 aa11.94□□□□□ -0.5
SEC13-209ENST00000397117 TOMM20Q15388 145 aa11.94□□□□□ -0.5
SEC13-209ENST00000397117 PLPPR5Q32ZL2 321 aa11.94□□□□□ -0.5
SEC13-209ENST00000397117 SLC36A3Q495N2 470 aa11.94□□□□□ -0.5
SEC13-209ENST00000397117 SLC25A25Q6KCM7 469 aa11.94□□□□□ -0.5
SEC13-209ENST00000397117 C10orf53Q8N6V4 93 aa11.94□□□□□ -0.5
SEC13-209ENST00000397117 ZBTB8AQ96BR9 441 aa11.94□□□□□ -0.5
SEC13-209ENST00000397117 SGTBQ96EQ0 304 aa11.94□□□□□ -0.5
SEC13-209ENST00000397117 ZFP64Q9NPA5 681 aa11.94□□□□□ -0.5
SEC13-209ENST00000397117 MEPEQ9NQ76 525 aaPredicted RBP11.94□□□□□ -0.5
SEC13-209ENST00000397117 KLHL1Q9NR64 748 aa11.94□□□□□ -0.5
SEC13-209ENST00000397117 C20orf141Q9NUB4 165 aa11.94□□□□□ -0.5
SEC13-209ENST00000397117 LOC100130705A0A1B0GUX0 176 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 UNC119BA6NIH7 251 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 KLRC4-KLRK1H3BQV0 150 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 C19orf84I3L1E1 186 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 BCKDKO14874 412 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 SP1P08047 785 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 HK1P19367 917 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 MAKP20794 623 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 TCEA1P23193 301 aaKnown RBP11.93□□□□□ -0.5
SEC13-209ENST00000397117 SSTR2P30874 369 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 GSSP48637 474 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 DLX5P56178 289 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 KRTAP10-9P60411 292 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 ADARB1P78563 741 aaKnown RBP11.93□□□□□ -0.5
SEC13-209ENST00000397117 TMPRSS11FQ6ZWK6 438 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 ADGRG3Q86Y34 549 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 SULF2Q8IWU5 870 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 MDS2Q8NDY4 140 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 OR2M7Q8NG81 312 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 CNBD2Q96M20 576 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 GPA33Q99795 319 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 GRIP2Q9C0E4 1043 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 SERINC1Q9NRX5 453 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 DEPPQ9NTK1 212 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 TUBA8Q9NY65 449 aaPredicted RBP11.93□□□□□ -0.5
SEC13-209ENST00000397117 B4GALT7Q9UBV7 327 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 CHRNA9Q9UGM1 479 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 SPIN1Q9Y657 262 aaPredicted RBP11.93□□□□□ -0.5
SEC13-209ENST00000397117 IGKV1D-42A0A075B6H8 117 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 A8MVM7 634 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 ETV2O00321 342 aaPredicted RBP11.93□□□□□ -0.5
SEC13-209ENST00000397117 SLC16A6O15403 523 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 KLF4O43474 513 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 NME2P1O60361 137 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 SOX14O95416 240 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 RPSAP08865 295 aaKnown RBP11.93□□□□□ -0.5
SEC13-209ENST00000397117 NME2P22392 152 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 ADH6P28332 368 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 POLR2IP36954 125 aaKnown RBP11.93□□□□□ -0.5
SEC13-209ENST00000397117 MAP2K6P52564 334 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 CRISP1P54107 249 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 RBPJQ06330 500 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 CDSNQ15517 529 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 C3AR1Q16581 482 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 SLC25A53Q5H9E4 307 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 ZNF766Q5HY98 468 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 C5orf46Q6UWT4 87 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 SPNS3Q6ZMD2 512 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 RASSF6Q6ZTQ3 369 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 MARVELD2Q8N4S9 558 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 TMEM178AQ8NBL3 297 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 HES7Q9BYE0 225 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 ANKRD60Q9BZ19 345 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 REV1Q9UBZ9 1251 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 SH3BGRL2Q9UJC5 107 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 ZNF835Q9Y2P0 537 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 GMPPBQ9Y5P6 360 aa11.93□□□□□ -0.5
SEC13-209ENST00000397117 TRAV36DV7A0A075B6V5 113 aa11.92□□□□□ -0.5
SEC13-209ENST00000397117 TMEM72A0PK05 275 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms