RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 CLDND2Q8NHS1 167 aa12.93□□□□□ -0.34
SEC13-206ENST00000397102 IFT81Q8WYA0 676 aa12.93□□□□□ -0.34
SEC13-206ENST00000397102 SLC35G5Q96KT7 338 aa12.93□□□□□ -0.34
SEC13-206ENST00000397102 LRRC37BQ96QE4 947 aa12.93□□□□□ -0.34
SEC13-206ENST00000397102 PRPF18Q99633 342 aaKnown RBP12.93□□□□□ -0.34
SEC13-206ENST00000397102 POLE3Q9NRF9 147 aa12.93□□□□□ -0.34
SEC13-206ENST00000397102 OSGIN1Q9UJX0 560 aa12.93□□□□□ -0.34
SEC13-206ENST00000397102 WDR45Q9Y484 360 aa12.93□□□□□ -0.34
SEC13-206ENST00000397102 NR5A2O00482 541 aa12.92□□□□□ -0.34
SEC13-206ENST00000397102 TMPRSS2O15393 492 aa12.92□□□□□ -0.34
SEC13-206ENST00000397102 PLIN3O60664 434 aa12.92□□□□□ -0.34
SEC13-206ENST00000397102 SKAP2O75563 359 aaPredicted RBP12.92□□□□□ -0.34
SEC13-206ENST00000397102 ADRA2AP08913 450 aa12.92□□□□□ -0.34
SEC13-206ENST00000397102 HOXB1P14653 301 aaPredicted RBP12.92□□□□□ -0.34
SEC13-206ENST00000397102 GPR6P46095 362 aaPredicted RBP12.92□□□□□ -0.34
SEC13-206ENST00000397102 POLR2HP52434 150 aaKnown RBP12.92□□□□□ -0.34
SEC13-206ENST00000397102 ETF1P62495 437 aaKnown RBP12.92□□□□□ -0.34
SEC13-206ENST00000397102 KCNJ10P78508 379 aa12.92□□□□□ -0.34
SEC13-206ENST00000397102 PLAURQ03405 335 aa12.92□□□□□ -0.34
SEC13-206ENST00000397102 C6orf120Q7Z4R8 191 aa12.92□□□□□ -0.34
SEC13-206ENST00000397102 TMEM99Q8N816 258 aa12.92□□□□□ -0.34
SEC13-206ENST00000397102 OR51F2Q8NH61 342 aa12.92□□□□□ -0.34
SEC13-206ENST00000397102 TWIST2Q8WVJ9 160 aa12.92□□□□□ -0.34
SEC13-206ENST00000397102 PPP3R2Q96LZ3 170 aa12.92□□□□□ -0.34
SEC13-206ENST00000397102 ALKBH3Q96Q83 286 aaPredicted RBP12.92□□□□□ -0.34
SEC13-206ENST00000397102 RACGAP1Q9H0H5 632 aa12.92□□□□□ -0.34
SEC13-206ENST00000397102 NELFAQ9H3P2 528 aa12.92□□□□□ -0.34
SEC13-206ENST00000397102 TPK1Q9H3S4 243 aa12.92□□□□□ -0.34
SEC13-206ENST00000397102 LPAR2Q9HBW0 351 aa12.92□□□□□ -0.34
SEC13-206ENST00000397102 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.92□□□□□ -0.34
SEC13-206ENST00000397102 PSMC3IPQ9P2W1 217 aaPredicted RBP12.92□□□□□ -0.34
SEC13-206ENST00000397102 A0A096LPE4 126 aa12.91□□□□□ -0.34
SEC13-206ENST00000397102 A0A1W2PPZ6 126 aa12.91□□□□□ -0.34
SEC13-206ENST00000397102 ZC3H12DA2A288 527 aaKnown RBP12.91□□□□□ -0.34
SEC13-206ENST00000397102 OR6C65A6NJZ3 312 aa12.91□□□□□ -0.34
SEC13-206ENST00000397102 AQP7P3A6NL99 342 aa12.91□□□□□ -0.34
SEC13-206ENST00000397102 AKR7A3O95154 331 aa12.91□□□□□ -0.34
SEC13-206ENST00000397102 AGR2O95994 175 aa12.91□□□□□ -0.34
SEC13-206ENST00000397102 GPIP06744 558 aa12.91□□□□□ -0.34
SEC13-206ENST00000397102 SAGP10523 405 aaPredicted RBP12.91□□□□□ -0.34
SEC13-206ENST00000397102 CPA3P15088 417 aa12.91□□□□□ -0.34
SEC13-206ENST00000397102 CBR1P16152 277 aa12.91□□□□□ -0.34
SEC13-206ENST00000397102 TACR3P29371 465 aa12.91□□□□□ -0.34
SEC13-206ENST00000397102 DEFA6Q01524 100 aa12.91□□□□□ -0.34
SEC13-206ENST00000397102 SLC9B1Q4ZJI4 515 aa12.91□□□□□ -0.34
SEC13-206ENST00000397102 SHISA2Q6UWI4 295 aa12.91□□□□□ -0.34
SEC13-206ENST00000397102 GPAT4Q86UL3 456 aa12.91□□□□□ -0.34
SEC13-206ENST00000397102 MYPOPQ86VE0 399 aaPredicted RBP12.91□□□□□ -0.34
SEC13-206ENST00000397102 MIPOL1Q8TD10 442 aa12.91□□□□□ -0.34
SEC13-206ENST00000397102 DUSP26Q9BV47 211 aa12.91□□□□□ -0.34
SEC13-206ENST00000397102 ZNF747Q9BV97 191 aa12.91□□□□□ -0.34
SEC13-206ENST00000397102 SUCNR1Q9BXA5 334 aa12.91□□□□□ -0.34
SEC13-206ENST00000397102 OR51I1Q9H343 314 aa12.91□□□□□ -0.34
SEC13-206ENST00000397102 NARFLQ9H6Q4 476 aa12.91□□□□□ -0.34
SEC13-206ENST00000397102 GIMAP2Q9UG22 337 aa12.91□□□□□ -0.34
SEC13-206ENST00000397102 PCDHGB1Q9Y5G3 927 aa12.91□□□□□ -0.34
SEC13-206ENST00000397102 TGP01266 2768 aa12.91□□□□□ -0.34
SEC13-206ENST00000397102 TRAV20A0A0B4J274 112 aa12.9□□□□□ -0.34
SEC13-206ENST00000397102 IGHV2OR16-5A0A0B4J2B6 119 aa12.9□□□□□ -0.34
SEC13-206ENST00000397102 RNF103-CHMP3A0A140T963 221 aa12.9□□□□□ -0.34
SEC13-206ENST00000397102 A0A1W2PPM1 405 aa12.9□□□□□ -0.34
SEC13-206ENST00000397102 LIPT2A6NK58 231 aa12.9□□□□□ -0.34
SEC13-206ENST00000397102 AP3D1O14617 1153 aa12.9□□□□□ -0.34
SEC13-206ENST00000397102 PIP5K1BO14986 540 aa12.9□□□□□ -0.34
SEC13-206ENST00000397102 PEX11AO75192 247 aa12.9□□□□□ -0.34
SEC13-206ENST00000397102 PNPP00491 289 aa12.9□□□□□ -0.34
SEC13-206ENST00000397102 FGF4P08620 206 aa12.9□□□□□ -0.34
SEC13-206ENST00000397102 CELA3BP08861 270 aa12.9□□□□□ -0.34
SEC13-206ENST00000397102 GAAP10253 952 aa12.9□□□□□ -0.34
SEC13-206ENST00000397102 PRPS1L1P21108 318 aa12.9□□□□□ -0.34
SEC13-206ENST00000397102 ACHEP22303 614 aa12.9□□□□□ -0.34
SEC13-206ENST00000397102 SELENOPP49908 381 aa12.9□□□□□ -0.34
SEC13-206ENST00000397102 SH3BGRP55822 239 aaPredicted RBP12.9□□□□□ -0.34
SEC13-206ENST00000397102 CEACAM7Q14002 265 aa12.9□□□□□ -0.34
SEC13-206ENST00000397102 OR7A5Q15622 319 aa12.9□□□□□ -0.34
SEC13-206ENST00000397102 UGT3A2Q3SY77 523 aa12.9□□□□□ -0.34
SEC13-206ENST00000397102 ATP6AP1LQ52LC2 224 aa12.9□□□□□ -0.34
SEC13-206ENST00000397102 ELFN2Q5R3F8 820 aa12.9□□□□□ -0.34
SEC13-206ENST00000397102 ATAD3BQ5T9A4 648 aa12.9□□□□□ -0.34
SEC13-206ENST00000397102 SYT10Q6XYQ8 523 aa12.9□□□□□ -0.34
SEC13-206ENST00000397102 FRRS1Q6ZNA5 592 aa12.9□□□□□ -0.34
SEC13-206ENST00000397102 LINGO2Q7L985 606 aa12.9□□□□□ -0.34
SEC13-206ENST00000397102 LSRQ86X29 649 aaPredicted RBP12.9□□□□□ -0.34
SEC13-206ENST00000397102 RIMKLAQ8IXN7 391 aa12.9□□□□□ -0.34
SEC13-206ENST00000397102 CLEC4FQ8N1N0 589 aa12.9□□□□□ -0.34
SEC13-206ENST00000397102 KRTCAP2Q8N6L1 136 aa12.9□□□□□ -0.34
SEC13-206ENST00000397102 CCDC63Q8NA47 563 aa12.9□□□□□ -0.34
SEC13-206ENST00000397102 C1orf50Q9BV19 199 aa12.9□□□□□ -0.34
SEC13-206ENST00000397102 TBK1Q9UHD2 729 aa12.9□□□□□ -0.34
SEC13-206ENST00000397102 PKD1L1Q8TDX9 2849 aa12.89□□□□□ -0.35
SEC13-206ENST00000397102 A0A0G2JK05 382 aa12.89□□□□□ -0.35
SEC13-206ENST00000397102 CLDN24A6NM45 220 aa12.89□□□□□ -0.35
SEC13-206ENST00000397102 TMEM233B4DJY2 109 aa12.89□□□□□ -0.35
SEC13-206ENST00000397102 M0R233 179 aa12.89□□□□□ -0.35
SEC13-206ENST00000397102 FAAHO00519 579 aa12.89□□□□□ -0.35
SEC13-206ENST00000397102 RIPK2O43353 540 aa12.89□□□□□ -0.35
SEC13-206ENST00000397102 SYNGR3O43761 229 aa12.89□□□□□ -0.35
SEC13-206ENST00000397102 OR12D1P0DN82 309 aa12.89□□□□□ -0.35
SEC13-206ENST00000397102 ARR3P36575 388 aa12.89□□□□□ -0.35
SEC13-206ENST00000397102 CCT5P48643 541 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms