RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 C1orf162Q8NEQ5 155 aaPredicted RBP12.33□□□□□ -0.44
SEC13-204ENST00000397099 ELOA3Q8NG57 546 aa12.33□□□□□ -0.44
SEC13-204ENST00000397099 OR6S1Q8NH40 331 aa12.33□□□□□ -0.44
SEC13-204ENST00000397099 SLC47A1Q96FL8 570 aa12.33□□□□□ -0.44
SEC13-204ENST00000397099 THOC1Q96FV9 657 aaKnown RBP12.33□□□□□ -0.44
SEC13-204ENST00000397099 PLPPR2Q96GM1 343 aa12.33□□□□□ -0.44
SEC13-204ENST00000397099 RADILQ96JH8 1075 aa12.33□□□□□ -0.44
SEC13-204ENST00000397099 TMEM204Q9BSN7 226 aa12.33□□□□□ -0.44
SEC13-204ENST00000397099 TMEM120AQ9BXJ8 343 aa12.33□□□□□ -0.44
SEC13-204ENST00000397099 TMEM27Q9HBJ8 222 aa12.33□□□□□ -0.44
SEC13-204ENST00000397099 UPB1Q9UBR1 384 aa12.33□□□□□ -0.44
SEC13-204ENST00000397099 CHST2Q9Y4C5 530 aa12.33□□□□□ -0.44
SEC13-204ENST00000397099 FLVCR1Q9Y5Y0 555 aa12.33□□□□□ -0.44
SEC13-204ENST00000397099 DSCAMO60469 2012 aa12.33□□□□□ -0.44
SEC13-204ENST00000397099 C2CD3Q4AC94 2353 aa12.33□□□□□ -0.44
SEC13-204ENST00000397099 ZNF469Q96JG9 3925 aaPredicted RBP12.32□□□□□ -0.44
SEC13-204ENST00000397099 SETD2Q9BYW2 2564 aaPredicted RBP12.32□□□□□ -0.44
SEC13-204ENST00000397099 A0A1W2PPR1 153 aa12.32□□□□□ -0.44
SEC13-204ENST00000397099 ZC3H12DA2A288 527 aaKnown RBP12.32□□□□□ -0.44
SEC13-204ENST00000397099 SMPD2O60906 423 aa12.32□□□□□ -0.44
SEC13-204ENST00000397099 CD3EP07766 207 aa12.32□□□□□ -0.44
SEC13-204ENST00000397099 FOSL1P15407 271 aa12.32□□□□□ -0.44
SEC13-204ENST00000397099 LOXP28300 417 aaPredicted RBP12.32□□□□□ -0.44
SEC13-204ENST00000397099 PCBP3P57721 371 aaKnown RBP12.32□□□□□ -0.44
SEC13-204ENST00000397099 RGS8P57771 180 aaPredicted RBP12.32□□□□□ -0.44
SEC13-204ENST00000397099 CAPRIN1Q14444 709 aaKnown RBP12.32□□□□□ -0.44
SEC13-204ENST00000397099 PPA1Q15181 289 aa12.32□□□□□ -0.44
SEC13-204ENST00000397099 ADRM1Q16186 407 aa12.32□□□□□ -0.44
SEC13-204ENST00000397099 MMEL1Q495T6 779 aa12.32□□□□□ -0.44
SEC13-204ENST00000397099 PRSS57Q6UWY2 283 aa12.32□□□□□ -0.44
SEC13-204ENST00000397099 CASP12Q6UXS9 341 aa12.32□□□□□ -0.44
SEC13-204ENST00000397099 ZNF704Q6ZNC4 412 aaPredicted RBP12.32□□□□□ -0.44
SEC13-204ENST00000397099 C22orf34Q6ZV56 151 aa12.32□□□□□ -0.44
SEC13-204ENST00000397099 C17orf78Q8N4C9 275 aa12.32□□□□□ -0.44
SEC13-204ENST00000397099 ZNF433Q8N7K0 673 aaPredicted RBP12.32□□□□□ -0.44
SEC13-204ENST00000397099 ZNF611Q8N823 705 aa12.32□□□□□ -0.44
SEC13-204ENST00000397099 PCYOX1LQ8NBM8 494 aa12.32□□□□□ -0.44
SEC13-204ENST00000397099 OR9K2Q8NGE7 335 aa12.32□□□□□ -0.44
SEC13-204ENST00000397099 OR8J3Q8NGG0 315 aa12.32□□□□□ -0.44
SEC13-204ENST00000397099 OR52E4Q8NGH9 312 aa12.32□□□□□ -0.44
SEC13-204ENST00000397099 SLC38A4Q969I6 547 aa12.32□□□□□ -0.44
SEC13-204ENST00000397099 ZNF775Q96BV0 537 aaPredicted RBP12.32□□□□□ -0.44
SEC13-204ENST00000397099 EPYCQ99645 322 aa12.32□□□□□ -0.44
SEC13-204ENST00000397099 CCL19Q99731 98 aa12.32□□□□□ -0.44
SEC13-204ENST00000397099 IKZF5Q9H5V7 419 aa12.32□□□□□ -0.44
SEC13-204ENST00000397099 KAT8Q9H7Z6 458 aaKnown RBP12.32□□□□□ -0.44
SEC13-204ENST00000397099 UBTD1Q9HAC8 227 aa12.32□□□□□ -0.44
SEC13-204ENST00000397099 MOV10Q9HCE1 1003 aaKnown RBP12.32□□□□□ -0.44
SEC13-204ENST00000397099 ZNF446Q9NWS9 450 aa12.32□□□□□ -0.44
SEC13-204ENST00000397099 PRSS50Q9UI38 385 aa12.32□□□□□ -0.44
SEC13-204ENST00000397099 AP3M1Q9Y2T2 418 aa12.32□□□□□ -0.44
SEC13-204ENST00000397099 RNF115Q9Y4L5 304 aa12.32□□□□□ -0.44
SEC13-204ENST00000397099 MAGED1Q9Y5V3 778 aaPredicted RBP12.32□□□□□ -0.44
SEC13-204ENST00000397099 RAI1Q7Z5J4 1906 aaPredicted RBP12.32□□□□□ -0.44
SEC13-204ENST00000397099 ROS1P08922 2347 aa12.32□□□□□ -0.44
SEC13-204ENST00000397099 NF1P21359 2839 aa12.31□□□□□ -0.44
SEC13-204ENST00000397099 CIB4A0PJX0 185 aa12.31□□□□□ -0.44
SEC13-204ENST00000397099 OR5H1A6NKK0 313 aa12.31□□□□□ -0.44
SEC13-204ENST00000397099 HS3ST1O14792 307 aa12.31□□□□□ -0.44
SEC13-204ENST00000397099 FRS3O43559 492 aa12.31□□□□□ -0.44
SEC13-204ENST00000397099 FZD7O75084 574 aa12.31□□□□□ -0.44
SEC13-204ENST00000397099 LYZL6O75951 148 aa12.31□□□□□ -0.44
SEC13-204ENST00000397099 PRG2P13727 222 aa12.31□□□□□ -0.44
SEC13-204ENST00000397099 IGHV1-2P23083 117 aa12.31□□□□□ -0.44
SEC13-204ENST00000397099 PCGF2P35227 344 aa12.31□□□□□ -0.44
SEC13-204ENST00000397099 ALG10BQ5I7T1 473 aa12.31□□□□□ -0.44
SEC13-204ENST00000397099 NCMAPQ5T1S8 102 aa12.31□□□□□ -0.44
SEC13-204ENST00000397099 FAM69AQ5T7M9 428 aa12.31□□□□□ -0.44
SEC13-204ENST00000397099 KLHL17Q6TDP4 642 aa12.31□□□□□ -0.44
SEC13-204ENST00000397099 CXorf56Q9H5V9 222 aa12.31□□□□□ -0.44
SEC13-204ENST00000397099 FGFR1OP2Q9NVK5 253 aa12.31□□□□□ -0.44
SEC13-204ENST00000397099 GID8Q9NWU2 228 aa12.31□□□□□ -0.44
SEC13-204ENST00000397099 ADPRHL2Q9NX46 363 aa12.31□□□□□ -0.44
SEC13-204ENST00000397099 KLHL14Q9P2G3 628 aa12.31□□□□□ -0.44
SEC13-204ENST00000397099 MGAT4BQ9UQ53 548 aa12.31□□□□□ -0.44
SEC13-204ENST00000397099 B3GALT5Q9Y2C3 310 aa12.31□□□□□ -0.44
SEC13-204ENST00000397099 ARID1AO14497 2285 aa12.31□□□□□ -0.44
SEC13-204ENST00000397099 TRAV36DV7A0A075B6V5 113 aa12.3□□□□□ -0.44
SEC13-204ENST00000397099 CCT8L1PA6NM43 557 aa12.3□□□□□ -0.44
SEC13-204ENST00000397099 AIM2O14862 343 aa12.3□□□□□ -0.44
SEC13-204ENST00000397099 MFN2O95140 757 aa12.3□□□□□ -0.44
SEC13-204ENST00000397099 AKR7A3O95154 331 aa12.3□□□□□ -0.44
SEC13-204ENST00000397099 LGI1O95970 557 aa12.3□□□□□ -0.44
SEC13-204ENST00000397099 PAX1P15863 534 aa12.3□□□□□ -0.44
SEC13-204ENST00000397099 HOXC12P31275 282 aa12.3□□□□□ -0.44
SEC13-204ENST00000397099 FAPQ12884 760 aa12.3□□□□□ -0.44
SEC13-204ENST00000397099 STK11Q15831 433 aa12.3□□□□□ -0.44
SEC13-204ENST00000397099 ERICH5Q6P6B1 374 aa12.3□□□□□ -0.44
SEC13-204ENST00000397099 ZNF613Q6PF04 617 aa12.3□□□□□ -0.44
SEC13-204ENST00000397099 TMEM108Q6UXF1 575 aa12.3□□□□□ -0.44
SEC13-204ENST00000397099 GPAT4Q86UL3 456 aa12.3□□□□□ -0.44
SEC13-204ENST00000397099 RETREG3Q86VR2 466 aa12.3□□□□□ -0.44
SEC13-204ENST00000397099 PTOV1Q86YD1 416 aa12.3□□□□□ -0.44
SEC13-204ENST00000397099 TMEM99Q8N816 258 aa12.3□□□□□ -0.44
SEC13-204ENST00000397099 ADPRHL1Q8NDY3 354 aa12.3□□□□□ -0.44
SEC13-204ENST00000397099 WFDC11Q8NEX6 87 aa12.3□□□□□ -0.44
SEC13-204ENST00000397099 ANKK1Q8NFD2 765 aa12.3□□□□□ -0.44
SEC13-204ENST00000397099 SLC26A7Q8TE54 656 aa12.3□□□□□ -0.44
SEC13-204ENST00000397099 TMEM171Q8WVE6 324 aa12.3□□□□□ -0.44
SEC13-204ENST00000397099 BOD1Q96IK1 185 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms