RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 SYNDIG1Q9H7V2 258 aa9.06□□□□□ -0.96
TRIM39-203ENST00000396547 GMEB2Q9UKD1 530 aa9.06□□□□□ -0.96
TRIM39-203ENST00000396547 PLCL2Q9UPR0 1127 aa9.06□□□□□ -0.96
TRIM39-203ENST00000396547 ERVK-19Q9WJR5 959 aa9.06□□□□□ -0.96
TRIM39-203ENST00000396547 KCNK6Q9Y257 313 aa9.06□□□□□ -0.96
TRIM39-203ENST00000396547 HCFC2Q9Y5Z7 792 aa9.06□□□□□ -0.96
TRIM39-203ENST00000396547 NPTNQ9Y639 398 aa9.06□□□□□ -0.96
TRIM39-203ENST00000396547 A0A1B0GTH9 108 aa9.06□□□□□ -0.96
TRIM39-203ENST00000396547 ZNF98A6NK75 572 aa9.06□□□□□ -0.96
TRIM39-203ENST00000396547 OR52A4PA6NMU1 304 aa9.06□□□□□ -0.96
TRIM39-203ENST00000396547 F5H5P2 479 aa9.06□□□□□ -0.96
TRIM39-203ENST00000396547 H7C2Y5 167 aa9.06□□□□□ -0.96
TRIM39-203ENST00000396547 DNASE2O00115 360 aaPredicted RBP9.06□□□□□ -0.96
TRIM39-203ENST00000396547 BHLHE40O14503 412 aa9.06□□□□□ -0.96
TRIM39-203ENST00000396547 NARSO43776 548 aaKnown RBP9.06□□□□□ -0.96
TRIM39-203ENST00000396547 SELENOFO60613 162 aa9.06□□□□□ -0.96
TRIM39-203ENST00000396547 RCBTB2O95199 551 aa9.06□□□□□ -0.96
TRIM39-203ENST00000396547 SOD2P04179 222 aa9.06□□□□□ -0.96
TRIM39-203ENST00000396547 CA3P07451 260 aa9.06□□□□□ -0.96
TRIM39-203ENST00000396547 F3P13726 295 aa9.06□□□□□ -0.96
TRIM39-203ENST00000396547 HIST1H1TP22492 207 aaPredicted RBP9.06□□□□□ -0.96
TRIM39-203ENST00000396547 ITPKBP27987 946 aa9.06□□□□□ -0.96
TRIM39-203ENST00000396547 BCL6P41182 706 aa9.06□□□□□ -0.96
TRIM39-203ENST00000396547 CCR2P41597 374 aa9.06□□□□□ -0.96
TRIM39-203ENST00000396547 FRKP42685 505 aaPredicted RBP9.06□□□□□ -0.96
TRIM39-203ENST00000396547 P2RX1P51575 399 aa9.06□□□□□ -0.96
TRIM39-203ENST00000396547 ART1P52961 327 aa9.06□□□□□ -0.96
TRIM39-203ENST00000396547 ST8SIA6P61647 398 aa9.06□□□□□ -0.96
TRIM39-203ENST00000396547 ZNF660Q6AZW8 331 aaPredicted RBP9.06□□□□□ -0.96
TRIM39-203ENST00000396547 SEZ6L2Q6UXD5 910 aa9.06□□□□□ -0.96
TRIM39-203ENST00000396547 OVCH2Q7RTZ1 564 aa9.06□□□□□ -0.96
TRIM39-203ENST00000396547 GJD3Q8N144 294 aa9.06□□□□□ -0.96
TRIM39-203ENST00000396547 LINC01555Q8NAE3 123 aa9.06□□□□□ -0.96
TRIM39-203ENST00000396547 CLRN3Q8NCR9 226 aa9.06□□□□□ -0.96
TRIM39-203ENST00000396547 OR7G2Q8NG99 324 aa9.06□□□□□ -0.96
TRIM39-203ENST00000396547 OR2L2Q8NH16 312 aa9.06□□□□□ -0.96
TRIM39-203ENST00000396547 HAVCR2Q8TDQ0 301 aa9.06□□□□□ -0.96
TRIM39-203ENST00000396547 SLC25A28Q96A46 364 aa9.06□□□□□ -0.96
TRIM39-203ENST00000396547 SEC22AQ96IW7 307 aa9.06□□□□□ -0.96
TRIM39-203ENST00000396547 MICU1Q9BPX6 476 aa9.06□□□□□ -0.96
TRIM39-203ENST00000396547 USB1Q9BQ65 265 aaKnown RBP9.06□□□□□ -0.96
TRIM39-203ENST00000396547 OR52A5Q9H2C5 316 aa9.06□□□□□ -0.96
TRIM39-203ENST00000396547 SLC39A1Q9NY26 324 aa9.06□□□□□ -0.96
TRIM39-203ENST00000396547 MYEF2Q9P2K5 600 aaKnown RBP9.06□□□□□ -0.96
TRIM39-203ENST00000396547 ZNF230Q9UIE0 474 aaPredicted RBP9.06□□□□□ -0.96
TRIM39-203ENST00000396547 TCF20Q9UGU0 1960 aaKnown RBP9.06□□□□□ -0.96
TRIM39-203ENST00000396547 MTCL1Q9Y4B5 1905 aaKnown RBP9.05□□□□□ -0.96
TRIM39-203ENST00000396547 CACNA1IQ9P0X4 2223 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 A0A0A6YYD5 115 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 GRXCR1A8MXD5 290 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 FAM25EA8MYX2 175 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 CACNB4O00305 520 aaPredicted RBP9.05□□□□□ -0.96
TRIM39-203ENST00000396547 RAD1O60671 282 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 SERPINA3P01011 423 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 SLC35G4P0C7Q5 338 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 HTR2AP28223 471 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 RAG2P55895 527 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 TAS2R43P59537 309 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 GMFBP60983 142 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 MTSS1LQ765P7 747 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 RANBP3LQ86VV4 465 aaPredicted RBP9.05□□□□□ -0.96
TRIM39-203ENST00000396547 TMPRSS12Q86WS5 348 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 MUC20Q8N307 709 aaPredicted RBP9.05□□□□□ -0.96
TRIM39-203ENST00000396547 KCT2Q8NC54 265 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 BPIFCQ8NFQ6 507 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 SLC25A38Q96DW6 304 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 KCNK15Q9H427 330 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 ZCCHC4Q9H5U6 513 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 NRIP3Q9NQ35 241 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 TAS2R5Q9NYW4 299 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 AKAP7Q9P0M2 348 aaPredicted RBP9.05□□□□□ -0.96
TRIM39-203ENST00000396547 ADAM18Q9Y3Q7 739 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 TRAPPC13A5PLN9 417 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 OR2W5A6NFC9 320 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 GABARAPH6UMI1 98 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 SYT5O00445 386 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 KCNAB3O43448 404 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 GALR3O60755 368 aaPredicted RBP9.05□□□□□ -0.96
TRIM39-203ENST00000396547 ATG12O94817 140 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 ECDO95905 644 aaPredicted RBP9.05□□□□□ -0.96
TRIM39-203ENST00000396547 FGF2P09038 288 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 GALP22466 123 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 DLX5P56178 289 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 MESP2Q0VG99 397 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 TRAM1Q15629 374 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 DUSP5Q16690 384 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 PDSS1Q5T2R2 415 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 MRPL2Q5T653 305 aaKnown RBP9.05□□□□□ -0.96
TRIM39-203ENST00000396547 MRM1Q6IN84 353 aaKnown RBP9.05□□□□□ -0.96
TRIM39-203ENST00000396547 FAM199XQ6PEV8 388 aaPredicted RBP9.05□□□□□ -0.96
TRIM39-203ENST00000396547 RTL10Q7L3V2 364 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 CDH26Q8IXH8 852 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 PXT1Q8NFP0 134 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 ATOH1Q92858 354 aaPredicted RBP9.05□□□□□ -0.96
TRIM39-203ENST00000396547 LMLNQ96KR4 655 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 HSPA12BQ96MM6 686 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 ACTRT3Q9BYD9 372 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 EXO5Q9H790 373 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 CMC2Q9NRP2 79 aa9.05□□□□□ -0.96
TRIM39-203ENST00000396547 GLS2Q9UI32 602 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms